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The map label for this gene is ppdD [C]

Identifier: 66043985

GI number: 66043985

Start: 824370

End: 824771

Strand: Direct

Name: ppdD [C]

Synonym: Psyr_0720

Alternate gene names: 66043985

Gene position: 824370-824771 (Clockwise)

Preceding gene: 66043984

Following gene: 66043986

Centisome position: 13.53

GC content: 56.97

Gene sequence:

>402_bases
ATGCGAGCGACATCCAGGGGCTTTACGTTGATCGAACTCATGATCGTCGTGGCGATTGTCGGTATTCTGGCGGCCATCGC
GTACCCCAGTTACACCGAGTACGTGAAGCGCACCCAGCGGTCGGCGATTGCTAGCCTGCTGTCCGAGCAAACCCAGGCGC
TGGAGCGGTTTTATTCGCAGAAGGGAAATTACTCGGATTACAAAGGCGTATCTGGTGGTAATACGTACTACAAGATAACG
CCGACCCTAACTGCCACCGACTTCACCCTGACAGCTGACCCTATCGGAGGCACGCTGATGGCTGGCGACAAGTGCGGCAG
TTTCGTGATTACTAACACCGGAGCGCGTACCAACACGGGCGCAACCAGCGGCGTCACTGTCAAAGACTGCTGGGGCCGCT
AA

Upstream 100 bases:

>100_bases
ACTCCACCGGCAACACGCCTGATCGCCTGAAGGAAAAGGGCGGAAGTGGTAACGTTTACCAACGCATCATGTGGCGACAA
ATCCAATAGGGAAACTAGAC

Downstream 100 bases:

>100_bases
ACCGTTTCCTTGTCACGAGACCAAGATGTCCAAGCAAAAAATAGTCATTGTCGGCGGTGGCGTCATAGGTCTGTTGACCG
CCTTCAATCTGGCGTCCGAG

Product: fimbrial protein pilin

Products: NA

Alternate protein names: Type IV Pilus-Like Protein; Type IV Pilus Biogenesis Protein PilE; Fimbrial Protein Pilin

Number of amino acids: Translated: 133; Mature: 133

Protein sequence:

>133_residues
MRATSRGFTLIELMIVVAIVGILAAIAYPSYTEYVKRTQRSAIASLLSEQTQALERFYSQKGNYSDYKGVSGGNTYYKIT
PTLTATDFTLTADPIGGTLMAGDKCGSFVITNTGARTNTGATSGVTVKDCWGR

Sequences:

>Translated_133_residues
MRATSRGFTLIELMIVVAIVGILAAIAYPSYTEYVKRTQRSAIASLLSEQTQALERFYSQKGNYSDYKGVSGGNTYYKIT
PTLTATDFTLTADPIGGTLMAGDKCGSFVITNTGARTNTGATSGVTVKDCWGR
>Mature_133_residues
MRATSRGFTLIELMIVVAIVGILAAIAYPSYTEYVKRTQRSAIASLLSEQTQALERFYSQKGNYSDYKGVSGGNTYYKIT
PTLTATDFTLTADPIGGTLMAGDKCGSFVITNTGARTNTGATSGVTVKDCWGR

Specific function: Not Yet Known. [C]

COG id: COG4968

COG function: function code NU; Tfp pilus assembly protein PilE

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14257; Mature: 14257

Theoretical pI: Translated: 9.34; Mature: 9.34

Prosite motif: PS00409 PROKAR_NTER_METHYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRATSRGFTLIELMIVVAIVGILAAIAYPSYTEYVKRTQRSAIASLLSEQTQALERFYSQ
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
KGNYSDYKGVSGGNTYYKITPTLTATDFTLTADPIGGTLMAGDKCGSFVITNTGARTNTG
CCCCCCCCCCCCCCCEEEEECCEEECCEEEEECCCCCEEEECCCCCCEEEECCCCCCCCC
ATSGVTVKDCWGR
CCCCCCHHCCCCC
>Mature Secondary Structure
MRATSRGFTLIELMIVVAIVGILAAIAYPSYTEYVKRTQRSAIASLLSEQTQALERFYSQ
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
KGNYSDYKGVSGGNTYYKITPTLTATDFTLTADPIGGTLMAGDKCGSFVITNTGARTNTG
CCCCCCCCCCCCCCCEEEEECCEEECCEEEEECCCCCEEEECCCCCCEEEECCCCCCCCC
ATSGVTVKDCWGR
CCCCCCHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA