Click here to switch to the map view.

The map label for this gene is ribF [H]

Identifier: 66043974

GI number: 66043974

Start: 812555

End: 813499

Strand: Direct

Name: ribF [H]

Synonym: Psyr_0709

Alternate gene names: 66043974

Gene position: 812555-813499 (Clockwise)

Preceding gene: 66043973

Following gene: 66043975

Centisome position: 13.33

GC content: 61.8

Gene sequence:

>945_bases
ATGAGCAAGAAGTGCGTTATGCAGCTGGTTAGAGGCCTTCACAACCTGCGCCCCGAACATCGGGGCTGCGTCGCCACGAT
TGGCAATTTCGACGGCGTTCATCGCGGCCACCAGGCTATCCTGGCGCGTCTGCGCGAGCGTGCCGTCGAATTGGGTGTGC
CCAGTTGTGTGGTGATCTTCGAGCCGCAGCCGCGTGAGTTCTTTGCGCCCGAGACGGCGCCGGCGCGTCTGGCCCGTCTG
CGTGACAAGCTTGAGCTGCTGAGTGCCGAAGGCGTTGACCGGGTACTGTGCCTGTCCTTCAATCAGCGTCTGTGCAAGCT
CAGCGCGGCAAGTTTTGTCGAGACCGTGCTGATCGACGGCCTCGGTGTCCAGCACCTCGAAGTGGGCGACGATTTTCGTT
TCGGCTTCGACCGGGTCGGTGACTTCGACTTCCTGCAACAGGCCGGCACATCGTATGGTTTTACCGTAGAAGCGGCGCAG
ACCGTTGAAATAGATGGCATCCGGGTCAGCAGCACCAAGGTGCGCAAGGCTCTGGCTGCGTCAGACTTTGCCCTGGCCGA
GCGTATGCTCGGTCGTCCGTTCCAGATAGCCGGGCGGGTATTGCACGGCCAGAAGCTGGCGCGCCAGCTGGGTACGCCCA
CCGCCAACGTACAACTCAAGCGTCGTCGTGTACCGCTGAGCGGGGTCTATCTGGTCAGCACGGACATCGATGGCAAAACC
TGGCCGGGGGTCGCCAACATCGGTGTACGCCCGACGGTCACCGGTGATGGCAGTGCCCACCTTGAAGTGCATCTTCTGGA
TTTTGCCGGCGATCTTTATGACCGGCGTTTGACGGTGGCTTTCCACCACAAGCTGCGTGATGAGCAGCGTTTCGCCTCAC
TGGAGGCGCTCAAGACGGCGATCAATGCGGACGTCGCCGCCGCCCGTGCCCATTGGCATGGCTAA

Upstream 100 bases:

>100_bases
GTTGACCTTCGGTTTTTGTCGCCACACGCCGAGAACCTTCATCCGGTCTTGGTGTGTTGCCTGTCGTCCACGGCCGTGTG
TGGTTATAATCGGCCACTTT

Downstream 100 bases:

>100_bases
CCGCTAAACAAGAGCCTGAAATGACTGACTATAAAGCCACGCTAAACCTTCCGGACACCGCCTTCCCTATGAAGGCCGGC
CTGCCCCAGCGCGAGCCGCA

Product: bifunctional riboflavin kinase/FMN adenylyltransferase

Products: NA

Alternate protein names: Riboflavin kinase; Flavokinase; FMN adenylyltransferase; FAD pyrophosphorylase; FAD synthase [H]

Number of amino acids: Translated: 314; Mature: 313

Protein sequence:

>314_residues
MSKKCVMQLVRGLHNLRPEHRGCVATIGNFDGVHRGHQAILARLRERAVELGVPSCVVIFEPQPREFFAPETAPARLARL
RDKLELLSAEGVDRVLCLSFNQRLCKLSAASFVETVLIDGLGVQHLEVGDDFRFGFDRVGDFDFLQQAGTSYGFTVEAAQ
TVEIDGIRVSSTKVRKALAASDFALAERMLGRPFQIAGRVLHGQKLARQLGTPTANVQLKRRRVPLSGVYLVSTDIDGKT
WPGVANIGVRPTVTGDGSAHLEVHLLDFAGDLYDRRLTVAFHHKLRDEQRFASLEALKTAINADVAAARAHWHG

Sequences:

>Translated_314_residues
MSKKCVMQLVRGLHNLRPEHRGCVATIGNFDGVHRGHQAILARLRERAVELGVPSCVVIFEPQPREFFAPETAPARLARL
RDKLELLSAEGVDRVLCLSFNQRLCKLSAASFVETVLIDGLGVQHLEVGDDFRFGFDRVGDFDFLQQAGTSYGFTVEAAQ
TVEIDGIRVSSTKVRKALAASDFALAERMLGRPFQIAGRVLHGQKLARQLGTPTANVQLKRRRVPLSGVYLVSTDIDGKT
WPGVANIGVRPTVTGDGSAHLEVHLLDFAGDLYDRRLTVAFHHKLRDEQRFASLEALKTAINADVAAARAHWHG
>Mature_313_residues
SKKCVMQLVRGLHNLRPEHRGCVATIGNFDGVHRGHQAILARLRERAVELGVPSCVVIFEPQPREFFAPETAPARLARLR
DKLELLSAEGVDRVLCLSFNQRLCKLSAASFVETVLIDGLGVQHLEVGDDFRFGFDRVGDFDFLQQAGTSYGFTVEAAQT
VEIDGIRVSSTKVRKALAASDFALAERMLGRPFQIAGRVLHGQKLARQLGTPTANVQLKRRRVPLSGVYLVSTDIDGKTW
PGVANIGVRPTVTGDGSAHLEVHLLDFAGDLYDRRLTVAFHHKLRDEQRFASLEALKTAINADVAAARAHWHG

Specific function: Unknown

COG id: COG0196

COG function: function code H; FAD synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribF family [H]

Homologues:

Organism=Escherichia coli, GI1786208, Length=308, Percent_Identity=52.9220779220779, Blast_Score=307, Evalue=5e-85,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015864
- InterPro:   IPR015865
- InterPro:   IPR002606
- InterPro:   IPR014729 [H]

Pfam domain/function: PF06574 FAD_syn; PF01687 Flavokinase [H]

EC number: =2.7.1.26; =2.7.7.2 [H]

Molecular weight: Translated: 34576; Mature: 34445

Theoretical pI: Translated: 9.33; Mature: 9.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKKCVMQLVRGLHNLRPEHRGCVATIGNFDGVHRGHQAILARLRERAVELGVPSCVVIF
CCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEE
EPQPREFFAPETAPARLARLRDKLELLSAEGVDRVLCLSFNQRLCKLSAASFVETVLIDG
CCCCCHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCC
LGVQHLEVGDDFRFGFDRVGDFDFLQQAGTSYGFTVEAAQTVEIDGIRVSSTKVRKALAA
CCCEEEECCCCCCCCHHHCCCHHHHHHCCCCCCEEEECCEEEEECCEEECHHHHHHHHHH
SDFALAERMLGRPFQIAGRVLHGQKLARQLGTPTANVQLKRRRVPLSGVYLVSTDIDGKT
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEEEEECCCCCC
WPGVANIGVRPTVTGDGSAHLEVHLLDFAGDLYDRRLTVAFHHKLRDEQRFASLEALKTA
CCCEECCCCCEEECCCCCCEEEEEEEECCCHHHHCEEHHHHHHHHHHHHHHHHHHHHHHH
INADVAAARAHWHG
HCCHHHHHHHCCCC
>Mature Secondary Structure 
SKKCVMQLVRGLHNLRPEHRGCVATIGNFDGVHRGHQAILARLRERAVELGVPSCVVIF
CHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEE
EPQPREFFAPETAPARLARLRDKLELLSAEGVDRVLCLSFNQRLCKLSAASFVETVLIDG
CCCCCHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCC
LGVQHLEVGDDFRFGFDRVGDFDFLQQAGTSYGFTVEAAQTVEIDGIRVSSTKVRKALAA
CCCEEEECCCCCCCCHHHCCCHHHHHHCCCCCCEEEECCEEEEECCEEECHHHHHHHHHH
SDFALAERMLGRPFQIAGRVLHGQKLARQLGTPTANVQLKRRRVPLSGVYLVSTDIDGKT
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEEEEECCCCCC
WPGVANIGVRPTVTGDGSAHLEVHLLDFAGDLYDRRLTVAFHHKLRDEQRFASLEALKTA
CCCEECCCCCEEECCCCCCEEEEEEEECCCHHHHCEEHHHHHHHHHHHHHHHHHHHHHHH
INADVAAARAHWHG
HCCHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2121716 [H]