Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
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Accession | NC_007005 |
Length | 6,093,698 |
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The map label for this gene is mviN [H]
Identifier: 66043973
GI number: 66043973
Start: 810854
End: 812440
Strand: Direct
Name: mviN [H]
Synonym: Psyr_0708
Alternate gene names: 66043973
Gene position: 810854-812440 (Clockwise)
Preceding gene: 66043971
Following gene: 66043974
Centisome position: 13.31
GC content: 59.11
Gene sequence:
>1587_bases ATGGCTGGCTTAATCGCCCATCCTTTGCCAAGGCGCACAACTCTTTCAATGAATCTACTCAAGTCACTCGCCGCCGTCAG CTCTATCACCATGGTTTCCAGGGTTCTGGGCTTTGTCCGCGACACCATCATCGCGCGCACTTTCGGTGCCGGAATGGCCA CGGATGCGTTCTTCATCGCCTTCAAGCTGCCCAATCTGCTGCGCCGTATTTTCGCCGAGGGTGCCTTTTCCCAGGCATTC GTGCCGATCCTGGCCGAGTACAAGAGCCAGCAGGGGGAGGAGGCGACGCGTACCTTCATTTCGTATGTCACCGGGCTGCT GACCCTTGCGCTGGCGCTGGTGACACTGCTCGGAGTGATATTTGCGCCCTGGGTGATCTGGGCCACCGCGCCCGGCTTTG TCGACACCCCGGAGAAGTTCGCCCTCACCTCGGACCTGCTGCGGGTGACCTTTCCTTATATATTGCTGATCTCCCTGTCC TCGATGGCCGGGGCGATCCTCAATACCTGGAACCGTTTCTCGGTGCCGGCGTTCGTGCCTACGCTGCTCAACGTCAGCAT GATTTTCTTCGCGCTGTTCCTGACGCCGTATTTCGATCCGCCGGTCATGGCGCTGGGCTGGGCGGTTCTGGTGGGCGGCC TGCTGCAGCTGCTTTACCAACTGCCGCACCTGAAAAAGATCGGCATGCTGGTGCTGCCGCGCCTGAATCTGCGCGACACC GGGGTCTGGCGGGTAATGAAGCAGATGCTGCCCGCCATCCTTGGCGTTTCTGTCAGTCAGATTTCTCTGATCATCAACAC GATCTTTGCCTCGTTCCTCGTCGCCGGTTCGGTGTCATGGATGTACTACGCCGACCGTTTGATGGAGCTGCCCTCCGGTG TGCTGGGTGTGGCGCTGGGTACGATTCTGCTGCCGATACTGTCCAAAACCTACGCGCAACGGGATCGCCAGGAATATTCG CGGATTCTCGACTGGGGTCTGCGGCTGTGTTTCGTGCTGGTCCTGCCTTGCACCCTGGCGCTGGGGCTGCTCGCCGAACC ATTGACCGTTTCGTTGTTTCAGTATGGTAAATTCGACGCGCTCGACGCGGCTATGACCCAGCGTGCGCTGGTCGCCTATT CGGTCGGTTTGCTGGGGATCATCCTGATCAAGGTGCTGGCCCCCGGTTTTTATGCTCAACAAAATATCCGCACCCCGGTG AAAATCGCGATCTTCACCCTCATAGTGACTCAACTGCTCAACCTGGCCTTCATCGTGCCCTTGCAGCATGCCGGTCTGGC GCTGGCGATCAGTGTGGGGGCGTGCATCAATGCCGGGTTGTTGTTCTGGCAGTTGCGCAAGCAGGATCTGTTTCAGCCGC AGCCAGGCTGGACGAAGTTCCTGTTCAAGCTGGTGATTGCCGTCGCGGTGATGTCGGCGGTGCTGCTGGGGCTCATGCAT GTCATGCCGGCGTGGGACGAAGGTCACATGCTGGAGCGTTTTCTGCGTCTGGGTGCGCTGGTTGCAGCCGGCGTCGTGAC CTATTTCGCCATGCTTCTTTTATTAGGCTTCCGCCTCCGGGATTTCGCCCGCAAAGCCATTATGTAG
Upstream 100 bases:
>100_bases AGTGGTTGCTACATTTGACTGGAGGATTTATTTCCGGCCTGTGACCTGTAAACTCGCGGCCTTTGCTTCGGGCGTTTTTG CGGCGCGAAGTATCGCATAA
Downstream 100 bases:
>100_bases GGCGCGTTGCAGGGGTTGACCTTCGGTTTTTGTCGCCACACGCCGAGAACCTTCATCCGGTCTTGGTGTGTTGCCTGTCG TCCACGGCCGTGTGTGGTTA
Product: virulence factor MVIN-like
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 528; Mature: 527
Protein sequence:
>528_residues MAGLIAHPLPRRTTLSMNLLKSLAAVSSITMVSRVLGFVRDTIIARTFGAGMATDAFFIAFKLPNLLRRIFAEGAFSQAF VPILAEYKSQQGEEATRTFISYVTGLLTLALALVTLLGVIFAPWVIWATAPGFVDTPEKFALTSDLLRVTFPYILLISLS SMAGAILNTWNRFSVPAFVPTLLNVSMIFFALFLTPYFDPPVMALGWAVLVGGLLQLLYQLPHLKKIGMLVLPRLNLRDT GVWRVMKQMLPAILGVSVSQISLIINTIFASFLVAGSVSWMYYADRLMELPSGVLGVALGTILLPILSKTYAQRDRQEYS RILDWGLRLCFVLVLPCTLALGLLAEPLTVSLFQYGKFDALDAAMTQRALVAYSVGLLGIILIKVLAPGFYAQQNIRTPV KIAIFTLIVTQLLNLAFIVPLQHAGLALAISVGACINAGLLFWQLRKQDLFQPQPGWTKFLFKLVIAVAVMSAVLLGLMH VMPAWDEGHMLERFLRLGALVAAGVVTYFAMLLLLGFRLRDFARKAIM
Sequences:
>Translated_528_residues MAGLIAHPLPRRTTLSMNLLKSLAAVSSITMVSRVLGFVRDTIIARTFGAGMATDAFFIAFKLPNLLRRIFAEGAFSQAF VPILAEYKSQQGEEATRTFISYVTGLLTLALALVTLLGVIFAPWVIWATAPGFVDTPEKFALTSDLLRVTFPYILLISLS SMAGAILNTWNRFSVPAFVPTLLNVSMIFFALFLTPYFDPPVMALGWAVLVGGLLQLLYQLPHLKKIGMLVLPRLNLRDT GVWRVMKQMLPAILGVSVSQISLIINTIFASFLVAGSVSWMYYADRLMELPSGVLGVALGTILLPILSKTYAQRDRQEYS RILDWGLRLCFVLVLPCTLALGLLAEPLTVSLFQYGKFDALDAAMTQRALVAYSVGLLGIILIKVLAPGFYAQQNIRTPV KIAIFTLIVTQLLNLAFIVPLQHAGLALAISVGACINAGLLFWQLRKQDLFQPQPGWTKFLFKLVIAVAVMSAVLLGLMH VMPAWDEGHMLERFLRLGALVAAGVVTYFAMLLLLGFRLRDFARKAIM >Mature_527_residues AGLIAHPLPRRTTLSMNLLKSLAAVSSITMVSRVLGFVRDTIIARTFGAGMATDAFFIAFKLPNLLRRIFAEGAFSQAFV PILAEYKSQQGEEATRTFISYVTGLLTLALALVTLLGVIFAPWVIWATAPGFVDTPEKFALTSDLLRVTFPYILLISLSS MAGAILNTWNRFSVPAFVPTLLNVSMIFFALFLTPYFDPPVMALGWAVLVGGLLQLLYQLPHLKKIGMLVLPRLNLRDTG VWRVMKQMLPAILGVSVSQISLIINTIFASFLVAGSVSWMYYADRLMELPSGVLGVALGTILLPILSKTYAQRDRQEYSR ILDWGLRLCFVLVLPCTLALGLLAEPLTVSLFQYGKFDALDAAMTQRALVAYSVGLLGIILIKVLAPGFYAQQNIRTPVK IAIFTLIVTQLLNLAFIVPLQHAGLALAISVGACINAGLLFWQLRKQDLFQPQPGWTKFLFKLVIAVAVMSAVLLGLMHV MPAWDEGHMLERFLRLGALVAAGVVTYFAMLLLLGFRLRDFARKAIM
Specific function: Unknown
COG id: COG0728
COG function: function code R; Uncharacterized membrane protein, putative virulence factor
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mviN family [H]
Homologues:
Organism=Escherichia coli, GI1787309, Length=511, Percent_Identity=74.1682974559687, Blast_Score=769, Evalue=0.0,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004268 [H]
Pfam domain/function: PF03023 MVIN [H]
EC number: NA
Molecular weight: Translated: 58091; Mature: 57960
Theoretical pI: Translated: 10.39; Mature: 10.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGLIAHPLPRRTTLSMNLLKSLAAVSSITMVSRVLGFVRDTIIARTFGAGMATDAFFIA CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH FKLPNLLRRIFAEGAFSQAFVPILAEYKSQQGEEATRTFISYVTGLLTLALALVTLLGVI HHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH FAPWVIWATAPGFVDTPEKFALTSDLLRVTFPYILLISLSSMAGAILNTWNRFSVPAFVP HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH TLLNVSMIFFALFLTPYFDPPVMALGWAVLVGGLLQLLYQLPHLKKIGMLVLPRLNLRDT HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHCCCCCCCCC GVWRVMKQMLPAILGVSVSQISLIINTIFASFLVAGSVSWMYYADRLMELPSGVLGVALG HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHH TILLPILSKTYAQRDRQEYSRILDWGLRLCFVLVLPCTLALGLLAEPLTVSLFQYGKFDA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH LDAAMTQRALVAYSVGLLGIILIKVLAPGFYAQQNIRTPVKIAIFTLIVTQLLNLAFIVP HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH LQHAGLALAISVGACINAGLLFWQLRKQDLFQPQPGWTKFLFKLVIAVAVMSAVLLGLMH HHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH VMPAWDEGHMLERFLRLGALVAAGVVTYFAMLLLLGFRLRDFARKAIM HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure AGLIAHPLPRRTTLSMNLLKSLAAVSSITMVSRVLGFVRDTIIARTFGAGMATDAFFIA CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH FKLPNLLRRIFAEGAFSQAFVPILAEYKSQQGEEATRTFISYVTGLLTLALALVTLLGVI HHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH FAPWVIWATAPGFVDTPEKFALTSDLLRVTFPYILLISLSSMAGAILNTWNRFSVPAFVP HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH TLLNVSMIFFALFLTPYFDPPVMALGWAVLVGGLLQLLYQLPHLKKIGMLVLPRLNLRDT HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHCCCCCCCCC GVWRVMKQMLPAILGVSVSQISLIINTIFASFLVAGSVSWMYYADRLMELPSGVLGVALG HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHH TILLPILSKTYAQRDRQEYSRILDWGLRLCFVLVLPCTLALGLLAEPLTVSLFQYGKFDA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH LDAAMTQRALVAYSVGLLGIILIKVLAPGFYAQQNIRTPVKIAIFTLIVTQLLNLAFIVP HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH LQHAGLALAISVGACINAGLLFWQLRKQDLFQPQPGWTKFLFKLVIAVAVMSAVLLGLMH HHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH VMPAWDEGHMLERFLRLGALVAAGVVTYFAMLLLLGFRLRDFARKAIM HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8200538; 11677609 [H]