Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
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Accession | NC_007005 |
Length | 6,093,698 |
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The map label for this gene is ygjG [C]
Identifier: 66043945
GI number: 66043945
Start: 768572
End: 769918
Strand: Direct
Name: ygjG [C]
Synonym: Psyr_0678
Alternate gene names: 66043945
Gene position: 768572-769918 (Clockwise)
Preceding gene: 66043935
Following gene: 66043946
Centisome position: 12.61
GC content: 60.28
Gene sequence:
>1347_bases ATGAATATGTTCGAAGTGTCCGATGTGCCTGTCACCCGTCAGTTGAAGCTCGATGCTCACTGGATGCCCTACACCGCGAA CCGAAATTTCCAGCGCGACCCGCGCATGGTCGTGGCCGCGCATGGCAGCTATCTGACAGACGACAAGGGACGCAAGATCT ACGATGCACTCTCAGGTCTATGGACATGCGGTGCCGGGCACACGCGCAAGGAAATTCAGGAAGCCGTGTCCCGGCAATTG GGCGTGCTGGATTACTCACCGGGCTTTCAGTTCGGGCACCCCCTGTCGTTCCAGCTGGCAGAACAGATTACCGACCTGAC GCCGGGCAATCTCAACCACGTCTTCTATACCAACTCGGGTTCCGAGTGCGCGGATACGGCGGTGAAGATGGTACGCGCCT ACTGGCGGCTGAAAGGCCAGGCGACCAAGACCAAGATGATCGGTCGGGCACGCGGCTACCACGGCGTGAATGTGGCGGGC ACCAGCCTGGGCGGAGTGAATGGCAACCGCAAGATGTTCGGCCAGTTGATGGACGTCGACCACTTGCCGCACACCCTGCT GGCCAGCAATGCGTACTCGAAGGGCATGCCCGAGGCGGGCGGTATCGCACTGGCTGACGAGATGCTCAAGCTGATCGAGT TGCATGATGCGTCGAACATCGCTGCAGTGATCGTCGAACCCATGTCGGGCTCGGCCGGTGTGATCGTTCCGCCGCAAGGC TATCTCAAGCGCCTGCGTGAGATTTGTGATCAACACAATATCCTGCTGATCTTCGATGAAGTCATCACCGGCTTCGGCCG TACGGGCTCGATGTTTGGCGCGGACAGTTTCGGTGTCACGCCTGACCTGATGTGCATCGCCAAGCAGATCACCAATGGCG CTATCCCCATGGGCGCGGTAATCGCCAGCAGCGAGATCTATCACACGTTCATGAACCAGCCAACGCCGGAGTACGCCGTC GAGTTCCCTCATGGCTATACCTATTCCGCTCACCCCGTAGCGTGTGCGGCCGGGCTGGCGGCGCTTGAACTGCTGCAACG GGAGAATCTGGTGCAGCAGGCCGCCGCAGTCGCGCCGCATTTTGAACGTGCGCTGCACGGTATCAAGGGCGCGAAAAACG TGGTCGATATCCGCAATTACGGTCTGGCGGGTGCCATCCAGCTCGCACCGCGTGACGGCGATGCCATCGTGCGGCCCTTC GAGGCCGGCATGAAGCTGTGGAAAGCCGGTTTCTATGTGCGCTTTGGCGGTGACACCCTGCAATTCGGGCCGACCTTCAA CAGCCAGGCGCAGGACCTGGATCGCTTGTTCGATGCCGTCGGCGAAACCCTGAACCTGATCGACTGA
Upstream 100 bases:
>100_bases TACCAAACCAAAGATCGTAAAAGTCGGGTTTTATGAACTTTAGCCGCGTGGCACCTTGGCTGCAATGACCGATCGTTTAG CGCCTGCGAGGCCTGCTCCC
Downstream 100 bases:
>100_bases TCGCGCTGGCAGGCTTTCTTCTTATATACGTGCCTTTATCGCATCGGGTGTGAGCTGACTCACGCCCGTTGCCTTTATCC GGAGTTCTCCATGAGCAGCA
Product: beta alanine--pyruvate transaminase
Products: NA
Alternate protein names: Omega-APT; Beta-alanine--pyruvate aminotransferase [H]
Number of amino acids: Translated: 448; Mature: 448
Protein sequence:
>448_residues MNMFEVSDVPVTRQLKLDAHWMPYTANRNFQRDPRMVVAAHGSYLTDDKGRKIYDALSGLWTCGAGHTRKEIQEAVSRQL GVLDYSPGFQFGHPLSFQLAEQITDLTPGNLNHVFYTNSGSECADTAVKMVRAYWRLKGQATKTKMIGRARGYHGVNVAG TSLGGVNGNRKMFGQLMDVDHLPHTLLASNAYSKGMPEAGGIALADEMLKLIELHDASNIAAVIVEPMSGSAGVIVPPQG YLKRLREICDQHNILLIFDEVITGFGRTGSMFGADSFGVTPDLMCIAKQITNGAIPMGAVIASSEIYHTFMNQPTPEYAV EFPHGYTYSAHPVACAAGLAALELLQRENLVQQAAAVAPHFERALHGIKGAKNVVDIRNYGLAGAIQLAPRDGDAIVRPF EAGMKLWKAGFYVRFGGDTLQFGPTFNSQAQDLDRLFDAVGETLNLID
Sequences:
>Translated_448_residues MNMFEVSDVPVTRQLKLDAHWMPYTANRNFQRDPRMVVAAHGSYLTDDKGRKIYDALSGLWTCGAGHTRKEIQEAVSRQL GVLDYSPGFQFGHPLSFQLAEQITDLTPGNLNHVFYTNSGSECADTAVKMVRAYWRLKGQATKTKMIGRARGYHGVNVAG TSLGGVNGNRKMFGQLMDVDHLPHTLLASNAYSKGMPEAGGIALADEMLKLIELHDASNIAAVIVEPMSGSAGVIVPPQG YLKRLREICDQHNILLIFDEVITGFGRTGSMFGADSFGVTPDLMCIAKQITNGAIPMGAVIASSEIYHTFMNQPTPEYAV EFPHGYTYSAHPVACAAGLAALELLQRENLVQQAAAVAPHFERALHGIKGAKNVVDIRNYGLAGAIQLAPRDGDAIVRPF EAGMKLWKAGFYVRFGGDTLQFGPTFNSQAQDLDRLFDAVGETLNLID >Mature_448_residues MNMFEVSDVPVTRQLKLDAHWMPYTANRNFQRDPRMVVAAHGSYLTDDKGRKIYDALSGLWTCGAGHTRKEIQEAVSRQL GVLDYSPGFQFGHPLSFQLAEQITDLTPGNLNHVFYTNSGSECADTAVKMVRAYWRLKGQATKTKMIGRARGYHGVNVAG TSLGGVNGNRKMFGQLMDVDHLPHTLLASNAYSKGMPEAGGIALADEMLKLIELHDASNIAAVIVEPMSGSAGVIVPPQG YLKRLREICDQHNILLIFDEVITGFGRTGSMFGADSFGVTPDLMCIAKQITNGAIPMGAVIASSEIYHTFMNQPTPEYAV EFPHGYTYSAHPVACAAGLAALELLQRENLVQQAAAVAPHFERALHGIKGAKNVVDIRNYGLAGAIQLAPRDGDAIVRPF EAGMKLWKAGFYVRFGGDTLQFGPTFNSQAQDLDRLFDAVGETLNLID
Specific function: Catalyzes transamination between a variety of omega- amino acids, mono and diamines, and pyruvate. Plays a pivotal role in the metabolism of the omega amino acids [H]
COG id: COG0161
COG function: function code H; Adenosylmethionine-8-amino-7-oxononanoate aminotransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Homo sapiens, GI4557809, Length=443, Percent_Identity=29.1196388261851, Blast_Score=151, Evalue=1e-36, Organism=Homo sapiens, GI13994255, Length=397, Percent_Identity=27.9596977329975, Blast_Score=127, Evalue=2e-29, Organism=Homo sapiens, GI284507298, Length=332, Percent_Identity=29.2168674698795, Blast_Score=127, Evalue=3e-29, Organism=Homo sapiens, GI37574042, Length=372, Percent_Identity=28.494623655914, Blast_Score=123, Evalue=4e-28, Organism=Homo sapiens, GI226442705, Length=372, Percent_Identity=28.2258064516129, Blast_Score=117, Evalue=3e-26, Organism=Homo sapiens, GI24119277, Length=390, Percent_Identity=25.3846153846154, Blast_Score=110, Evalue=2e-24, Organism=Homo sapiens, GI226442709, Length=336, Percent_Identity=28.8690476190476, Blast_Score=110, Evalue=3e-24, Organism=Escherichia coli, GI145693181, Length=311, Percent_Identity=35.048231511254, Blast_Score=177, Evalue=1e-45, Organism=Escherichia coli, GI1786991, Length=429, Percent_Identity=29.3706293706294, Blast_Score=164, Evalue=7e-42, Organism=Escherichia coli, GI1789759, Length=404, Percent_Identity=29.2079207920792, Blast_Score=147, Evalue=1e-36, Organism=Escherichia coli, GI1788044, Length=435, Percent_Identity=29.1954022988506, Blast_Score=146, Evalue=2e-36, Organism=Escherichia coli, GI1789016, Length=397, Percent_Identity=28.7153652392947, Blast_Score=133, Evalue=3e-32, Organism=Escherichia coli, GI1787560, Length=398, Percent_Identity=28.1407035175879, Blast_Score=116, Evalue=3e-27, Organism=Escherichia coli, GI1786349, Length=326, Percent_Identity=28.5276073619632, Blast_Score=95, Evalue=1e-20, Organism=Caenorhabditis elegans, GI32564660, Length=447, Percent_Identity=28.4116331096197, Blast_Score=150, Evalue=1e-36, Organism=Caenorhabditis elegans, GI25144271, Length=421, Percent_Identity=26.3657957244656, Blast_Score=134, Evalue=1e-31, Organism=Caenorhabditis elegans, GI71992977, Length=378, Percent_Identity=28.8359788359788, Blast_Score=126, Evalue=3e-29, Organism=Caenorhabditis elegans, GI25144274, Length=229, Percent_Identity=31.8777292576419, Blast_Score=116, Evalue=3e-26, Organism=Caenorhabditis elegans, GI17541228, Length=252, Percent_Identity=25.7936507936508, Blast_Score=75, Evalue=1e-13, Organism=Saccharomyces cerevisiae, GI6323470, Length=444, Percent_Identity=25.9009009009009, Blast_Score=153, Evalue=5e-38, Organism=Saccharomyces cerevisiae, GI6324386, Length=488, Percent_Identity=24.5901639344262, Blast_Score=129, Evalue=1e-30, Organism=Saccharomyces cerevisiae, GI6324432, Length=413, Percent_Identity=23.2445520581114, Blast_Score=104, Evalue=3e-23, Organism=Drosophila melanogaster, GI21357415, Length=442, Percent_Identity=26.4705882352941, Blast_Score=144, Evalue=9e-35, Organism=Drosophila melanogaster, GI161085790, Length=449, Percent_Identity=25.8351893095768, Blast_Score=129, Evalue=3e-30, Organism=Drosophila melanogaster, GI28574759, Length=451, Percent_Identity=26.6075388026608, Blast_Score=127, Evalue=1e-29, Organism=Drosophila melanogaster, GI21356575, Length=395, Percent_Identity=26.3291139240506, Blast_Score=126, Evalue=3e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005814 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00202 Aminotran_3 [H]
EC number: =2.6.1.18 [H]
Molecular weight: Translated: 48762; Mature: 48762
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: PS00600 AA_TRANSFER_CLASS_3 ; PS00639 THIOL_PROTEASE_HIS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNMFEVSDVPVTRQLKLDAHWMPYTANRNFQRDPRMVVAAHGSYLTDDKGRKIYDALSGL CCCEECCCCCCEEEEEECCCCCCEECCCCCCCCCCEEEEECCCEECCCCCCHHHHHHHHH WTCGAGHTRKEIQEAVSRQLGVLDYSPGFQFGHPLSFQLAEQITDLTPGNLNHVFYTNSG EECCCCCCHHHHHHHHHHHCCCEECCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEECCC SECADTAVKMVRAYWRLKGQATKTKMIGRARGYHGVNVAGTSLGGVNGNRKMFGQLMDVD CHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCEECCCCCCCCCCCHHHHHHHHHHC HLPHTLLASNAYSKGMPEAGGIALADEMLKLIELHDASNIAAVIVEPMSGSAGVIVPPQG CCCHHHHHCCCHHCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEECCHH YLKRLREICDQHNILLIFDEVITGFGRTGSMFGADSFGVTPDLMCIAKQITNGAIPMGAV HHHHHHHHHCCCCEEEEEHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHH IASSEIYHTFMNQPTPEYAVEFPHGYTYSAHPVACAAGLAALELLQRENLVQQAAAVAPH HHHHHHHHHHHCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FERALHGIKGAKNVVDIRNYGLAGAIQLAPRDGDAIVRPFEAGMKLWKAGFYVRFGGDTL HHHHHHHHCCCCHHHHHHCCCCEEEEEECCCCCCCEECHHHHHHHHHHCCEEEEECCCEE QFGPTFNSQAQDLDRLFDAVGETLNLID EECCCCCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNMFEVSDVPVTRQLKLDAHWMPYTANRNFQRDPRMVVAAHGSYLTDDKGRKIYDALSGL CCCEECCCCCCEEEEEECCCCCCEECCCCCCCCCCEEEEECCCEECCCCCCHHHHHHHHH WTCGAGHTRKEIQEAVSRQLGVLDYSPGFQFGHPLSFQLAEQITDLTPGNLNHVFYTNSG EECCCCCCHHHHHHHHHHHCCCEECCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEECCC SECADTAVKMVRAYWRLKGQATKTKMIGRARGYHGVNVAGTSLGGVNGNRKMFGQLMDVD CHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCEECCCCCCCCCCCHHHHHHHHHHC HLPHTLLASNAYSKGMPEAGGIALADEMLKLIELHDASNIAAVIVEPMSGSAGVIVPPQG CCCHHHHHCCCHHCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEECCHH YLKRLREICDQHNILLIFDEVITGFGRTGSMFGADSFGVTPDLMCIAKQITNGAIPMGAV HHHHHHHHHCCCCEEEEEHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHH IASSEIYHTFMNQPTPEYAVEFPHGYTYSAHPVACAAGLAALELLQRENLVQQAAAVAPH HHHHHHHHHHHCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FERALHGIKGAKNVVDIRNYGLAGAIQLAPRDGDAIVRPFEAGMKLWKAGFYVRFGGDTL HHHHHHHHCCCCHHHHHHCCCCEEEEEECCCCCCCEECHHHHHHHHHHCCEEEEECCCEE QFGPTFNSQAQDLDRLFDAVGETLNLID EECCCCCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1618757; 6822556; 2500426 [H]