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The map label for this gene is ydfF [H]

Identifier: 66043927

GI number: 66043927

Start: 748513

End: 749205

Strand: Direct

Name: ydfF [H]

Synonym: Psyr_0660

Alternate gene names: 66043927

Gene position: 748513-749205 (Clockwise)

Preceding gene: 66043926

Following gene: 66043935

Centisome position: 12.28

GC content: 62.34

Gene sequence:

>693_bases
ATGGAATACGGACCTTGCATCAGCCAGATCGCAACCTTGCTGGCCGACCCCAAGCGCAGCGCAATGATCTGGGCACTGAT
GGATGGTACTGCTCGCCCTGCCGACGAATTGGCAATCCTGGCGGGACTCTCGACTTCTTCTGCTGGCGCTCATCTGGCGC
GGCTGACCAGCGGTGGTCTGTTGAAACAGGAGGTTCGCGGCCGCAAGCGCTTTTTTCGCCTCGCTGCGCCGGAAGTGGGG
GCCGCGGTCGAGGCGCTGGCCTGTGCCTCGCTGGCCAGTACTGAACAGATCAATCGTCGCTTTGCCCAGCCTCGGCCGCC
CTTGCCGCTGCGCCGTGCAAGAATCTGCTCCGATCATCTGGGTGGCGAAATGGCTGCCGAGCTTTATCAGCGCCTGCTGG
AAGCCGGCTGGATAGAACAGCAGGAGAAGCGCGTCGAGGTCACCAGCAAGGGGGTGGCCAGATTTGCCGAACGCGGCATC
TACATACCCGCACTGGCGCAACGCAAGCGTGAAACGGTGTGTGTCTGTCCGAAGTGGAACGATCGCAATCCGCATCTTGG
CGGCGCGCTGGGGGCGGGGTTGTTGCAGCTGTTCATTCAGATGGGCTGGCTGCGCACCACTGAAGAGTCCAGCACCTTGC
AGGTCTCATCCAGTGGGCAGCGGGAAATCAGCAAGATCGCAGCGGCGGCCTGA

Upstream 100 bases:

>100_bases
ACTTGTCATTACATATAAGAGCCACGTTGAACTCTACCGAGGCGTGATTGCTTTCACCCAGTCATCACCATAGATGAATG
TTTCAACAGGGAGTGAACAC

Downstream 100 bases:

>100_bases
CTGGAGCGGTGGGTGTTGCTCGCTCCACCAACATCGTGCCACCGCTCCGCGTAGGCATGCAGTTCCGGACGCTCCGCGTC
CTCTTGCGACGCAGAGCGTC

Product: regulatory protein, ArsR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 230; Mature: 230

Protein sequence:

>230_residues
MEYGPCISQIATLLADPKRSAMIWALMDGTARPADELAILAGLSTSSAGAHLARLTSGGLLKQEVRGRKRFFRLAAPEVG
AAVEALACASLASTEQINRRFAQPRPPLPLRRARICSDHLGGEMAAELYQRLLEAGWIEQQEKRVEVTSKGVARFAERGI
YIPALAQRKRETVCVCPKWNDRNPHLGGALGAGLLQLFIQMGWLRTTEESSTLQVSSSGQREISKIAAAA

Sequences:

>Translated_230_residues
MEYGPCISQIATLLADPKRSAMIWALMDGTARPADELAILAGLSTSSAGAHLARLTSGGLLKQEVRGRKRFFRLAAPEVG
AAVEALACASLASTEQINRRFAQPRPPLPLRRARICSDHLGGEMAAELYQRLLEAGWIEQQEKRVEVTSKGVARFAERGI
YIPALAQRKRETVCVCPKWNDRNPHLGGALGAGLLQLFIQMGWLRTTEESSTLQVSSSGQREISKIAAAA
>Mature_230_residues
MEYGPCISQIATLLADPKRSAMIWALMDGTARPADELAILAGLSTSSAGAHLARLTSGGLLKQEVRGRKRFFRLAAPEVG
AAVEALACASLASTEQINRRFAQPRPPLPLRRARICSDHLGGEMAAELYQRLLEAGWIEQQEKRVEVTSKGVARFAERGI
YIPALAQRKRETVCVCPKWNDRNPHLGGALGAGLLQLFIQMGWLRTTEESSTLQVSSSGQREISKIAAAA

Specific function: Unknown

COG id: COG0640

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH arsR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001845
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01022 HTH_5 [H]

EC number: NA

Molecular weight: Translated: 24962; Mature: 24962

Theoretical pI: Translated: 9.93; Mature: 9.93

Prosite motif: PS50987 HTH_ARSR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEYGPCISQIATLLADPKRSAMIWALMDGTARPADELAILAGLSTSSAGAHLARLTSGGL
CCCCHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHCCCCCCCHHHHHHHHCCCH
LKQEVRGRKRFFRLAAPEVGAAVEALACASLASTEQINRRFAQPRPPLPLRRARICSDHL
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHC
GGEMAAELYQRLLEAGWIEQQEKRVEVTSKGVARFAERGIYIPALAQRKRETVCVCPKWN
CHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCEEECCCCC
DRNPHLGGALGAGLLQLFIQMGWLRTTEESSTLQVSSSGQREISKIAAAA
CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCHHHHHHHHHCC
>Mature Secondary Structure
MEYGPCISQIATLLADPKRSAMIWALMDGTARPADELAILAGLSTSSAGAHLARLTSGGL
CCCCHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHCCCCCCCHHHHHHHHCCCH
LKQEVRGRKRFFRLAAPEVGAAVEALACASLASTEQINRRFAQPRPPLPLRRARICSDHL
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHC
GGEMAAELYQRLLEAGWIEQQEKRVEVTSKGVARFAERGIYIPALAQRKRETVCVCPKWN
CHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCEEECCCCC
DRNPHLGGALGAGLLQLFIQMGWLRTTEESSTLQVSSSGQREISKIAAAA
CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]