Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
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Accession | NC_007005 |
Length | 6,093,698 |
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The map label for this gene is purA [H]
Identifier: 66043844
GI number: 66043844
Start: 655874
End: 657166
Strand: Direct
Name: purA [H]
Synonym: Psyr_0577
Alternate gene names: 66043844
Gene position: 655874-657166 (Clockwise)
Preceding gene: 66043843
Following gene: 66043845
Centisome position: 10.76
GC content: 60.56
Gene sequence:
>1293_bases ATGGGTAAGAATGTCGTAGTCCTGGGCACTCAATGGGGTGATGAGGGCAAAGGCAAGATCGTTGATCTGCTGACCGAACA TGCTACCGCCGTAGTTCGCTATCAGGGTGGCCACAACGCGGGCCACACGCTGGTGATCGACGGTGAGAAAACCGTTTTGC ACCTGATTCCGTCCGGTGTGCTGCGCGAAGGCGTGCAGTGCCTGATCGGTAACGGTGTGGTGGTTGCTCCCGACGCGCTC CTGCGCGAAATCGTCAAGCTGGAAGAGAAAGGCATTCCGGTGCGCGAGCGTCTGCGCATCAGCCCGTCCTGCCCGCTGAT CCTGTCGTACCACGTGGCACTCGACCAGGCGCGTGAAAAAGCCCGCGGCGAGTTCAAGATCGGCACCACCGGTCGTGGTA TCGGCCCGGCCTACGAAGACAAGGTCGCACGTCGCGGTCTGCGCATCGGTGACCTGTTCCATCGCGAGCGTTTCGCCGCC AAGCTGGGCGAACTGCTCGACTATCACAACTTCGTGCTGGTCAATTACTACAAAGAGCCTGCCATCGACTTCCAGAAGAC GCTCGACGAGTGCATGGAATACGCTGACATGCTCAAGCCGCTGATGCTCGACGTCACCGCTGCGCTGCATGAGATGCGTC GCGACGGCAAGGACATCATGTTCGAAGGCGCCCAGGGTTCGCTGCTGGACATCGACCACGGTACTTACCCGTACGTCACC AGCTCCAACACCACGGCGGGCGGCATTGCCACCGGCTCCGGTTTTGGCCCGATGTACCTGGATTACATCCTGGGCATCAC CAAGGCTTACACCACACGTGTGGGTTCGGGTCCGTTCCCGACAGAACTGTTCGACGACGTCGGTGCGTTCCTGGCCAAGC GTGGTCATGAGTTCGGTGCCACCACCGGTCGTGCACGCCGTTGTGGCTGGTTCGATGCCGTCATCCTGCGTCGCGCCATC GAAATCAACAGCATCTCGGGCCTGTGCCTGACCAAGCTGGACGTGCTCGACGGTCTGGAAACCATCAACATCTGCGTGGG CTACGAGAACGAAGAGGGTGCAGTCATTGACGCGCCTACCGACGCTGACAGCTATCTGGGTCTGCGTCCGGTCTACGAGC AGATGCCAGGCTGGAGCGAATCCACGCTGGGTGCCAAGACCCTCGAAGAGCTGCCTGCTGCCGCTCGCGCTTACATCAAG CGTGTCGAAGAGCTGGTGGGTGCGCCTATCGACATCATTTCGACCGGTCCTGACCGCAACGAAACCATCGTGCTGCGTCA TCCGTTCGGCTGA
Upstream 100 bases:
>100_bases GATTCAGCATGGCGAGCACTGGCAGGTAATGCCGCTGGCTTCTTGAGTATTCCTGCCGGCCGCCGCCGGCACCAAGTTTG CGTGAATGAGGACAAGTGTT
Downstream 100 bases:
>100_bases TACGTCACCGGGCTGTGCCAAAAAGGGTCGCCTGTGCGGCCCTTTTTTATTTTCGCGCCGAGGGCAGGGAAGCGCACAAA AGTGAGACTTGTGTCACGGC
Product: adenylosuccinate synthetase
Products: NA
Alternate protein names: AMPSase; AdSS; IMP--aspartate ligase [H]
Number of amino acids: Translated: 430; Mature: 429
Protein sequence:
>430_residues MGKNVVVLGTQWGDEGKGKIVDLLTEHATAVVRYQGGHNAGHTLVIDGEKTVLHLIPSGVLREGVQCLIGNGVVVAPDAL LREIVKLEEKGIPVRERLRISPSCPLILSYHVALDQAREKARGEFKIGTTGRGIGPAYEDKVARRGLRIGDLFHRERFAA KLGELLDYHNFVLVNYYKEPAIDFQKTLDECMEYADMLKPLMLDVTAALHEMRRDGKDIMFEGAQGSLLDIDHGTYPYVT SSNTTAGGIATGSGFGPMYLDYILGITKAYTTRVGSGPFPTELFDDVGAFLAKRGHEFGATTGRARRCGWFDAVILRRAI EINSISGLCLTKLDVLDGLETINICVGYENEEGAVIDAPTDADSYLGLRPVYEQMPGWSESTLGAKTLEELPAAARAYIK RVEELVGAPIDIISTGPDRNETIVLRHPFG
Sequences:
>Translated_430_residues MGKNVVVLGTQWGDEGKGKIVDLLTEHATAVVRYQGGHNAGHTLVIDGEKTVLHLIPSGVLREGVQCLIGNGVVVAPDAL LREIVKLEEKGIPVRERLRISPSCPLILSYHVALDQAREKARGEFKIGTTGRGIGPAYEDKVARRGLRIGDLFHRERFAA KLGELLDYHNFVLVNYYKEPAIDFQKTLDECMEYADMLKPLMLDVTAALHEMRRDGKDIMFEGAQGSLLDIDHGTYPYVT SSNTTAGGIATGSGFGPMYLDYILGITKAYTTRVGSGPFPTELFDDVGAFLAKRGHEFGATTGRARRCGWFDAVILRRAI EINSISGLCLTKLDVLDGLETINICVGYENEEGAVIDAPTDADSYLGLRPVYEQMPGWSESTLGAKTLEELPAAARAYIK RVEELVGAPIDIISTGPDRNETIVLRHPFG >Mature_429_residues GKNVVVLGTQWGDEGKGKIVDLLTEHATAVVRYQGGHNAGHTLVIDGEKTVLHLIPSGVLREGVQCLIGNGVVVAPDALL REIVKLEEKGIPVRERLRISPSCPLILSYHVALDQAREKARGEFKIGTTGRGIGPAYEDKVARRGLRIGDLFHRERFAAK LGELLDYHNFVLVNYYKEPAIDFQKTLDECMEYADMLKPLMLDVTAALHEMRRDGKDIMFEGAQGSLLDIDHGTYPYVTS SNTTAGGIATGSGFGPMYLDYILGITKAYTTRVGSGPFPTELFDDVGAFLAKRGHEFGATTGRARRCGWFDAVILRRAIE INSISGLCLTKLDVLDGLETINICVGYENEEGAVIDAPTDADSYLGLRPVYEQMPGWSESTLGAKTLEELPAAARAYIKR VEELVGAPIDIISTGPDRNETIVLRHPFG
Specific function: Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP [H]
COG id: COG0104
COG function: function code F; Adenylosuccinate synthase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenylosuccinate synthetase family [H]
Homologues:
Organism=Homo sapiens, GI22748717, Length=426, Percent_Identity=42.4882629107981, Blast_Score=328, Evalue=5e-90, Organism=Homo sapiens, GI34577063, Length=436, Percent_Identity=41.743119266055, Blast_Score=315, Evalue=5e-86, Organism=Homo sapiens, GI40316944, Length=397, Percent_Identity=40.5541561712846, Blast_Score=288, Evalue=6e-78, Organism=Escherichia coli, GI1790620, Length=430, Percent_Identity=69.5348837209302, Blast_Score=627, Evalue=0.0, Organism=Caenorhabditis elegans, GI25146553, Length=431, Percent_Identity=41.9953596287703, Blast_Score=335, Evalue=4e-92, Organism=Caenorhabditis elegans, GI25146555, Length=431, Percent_Identity=41.9953596287703, Blast_Score=334, Evalue=5e-92, Organism=Saccharomyces cerevisiae, GI6324109, Length=429, Percent_Identity=41.7249417249417, Blast_Score=331, Evalue=1e-91, Organism=Drosophila melanogaster, GI21356033, Length=425, Percent_Identity=42.1176470588235, Blast_Score=336, Evalue=2e-92,
Paralogues:
None
Copy number: 940 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018220 - InterPro: IPR001114 [H]
Pfam domain/function: PF00709 Adenylsucc_synt [H]
EC number: =6.3.4.4 [H]
Molecular weight: Translated: 46975; Mature: 46844
Theoretical pI: Translated: 5.48; Mature: 5.48
Prosite motif: PS01266 ADENYLOSUCCIN_SYN_1 ; PS00513 ADENYLOSUCCIN_SYN_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKNVVVLGTQWGDEGKGKIVDLLTEHATAVVRYQGGHNAGHTLVIDGEKTVLHLIPSGV CCCCEEEEEECCCCCCCCHHHHHHHHHCEEEEEECCCCCCCCEEEECCCCEEEEECCCHH LREGVQCLIGNGVVVAPDALLREIVKLEEKGIPVRERLRISPSCPLILSYHVALDQAREK HHHHHHEEECCCEEECCHHHHHHHHHHHHCCCCHHHHEECCCCCCEEEHHHHHHHHHHHH ARGEFKIGTTGRGIGPAYEDKVARRGLRIGDLFHRERFAAKLGELLDYHNFVLVNYYKEP HCCCEEECCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCC AIDFQKTLDECMEYADMLKPLMLDVTAALHEMRRDGKDIMFEGAQGSLLDIDHGTYPYVT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEECCCCCCCEEE SSNTTAGGIATGSGFGPMYLDYILGITKAYTTRVGSGPFPTELFDDVGAFLAKRGHEFGA CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCC TTGRARRCGWFDAVILRRAIEINSISGLCLTKLDVLDGLETINICVGYENEEGAVIDAPT CCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEEEEEEEECCCCCEEECCC DADSYLGLRPVYEQMPGWSESTLGAKTLEELPAAARAYIKRVEELVGAPIDIISTGPDRN CCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCC ETIVLRHPFG CEEEEECCCC >Mature Secondary Structure GKNVVVLGTQWGDEGKGKIVDLLTEHATAVVRYQGGHNAGHTLVIDGEKTVLHLIPSGV CCCEEEEEECCCCCCCCHHHHHHHHHCEEEEEECCCCCCCCEEEECCCCEEEEECCCHH LREGVQCLIGNGVVVAPDALLREIVKLEEKGIPVRERLRISPSCPLILSYHVALDQAREK HHHHHHEEECCCEEECCHHHHHHHHHHHHCCCCHHHHEECCCCCCEEEHHHHHHHHHHHH ARGEFKIGTTGRGIGPAYEDKVARRGLRIGDLFHRERFAAKLGELLDYHNFVLVNYYKEP HCCCEEECCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCC AIDFQKTLDECMEYADMLKPLMLDVTAALHEMRRDGKDIMFEGAQGSLLDIDHGTYPYVT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEECCCCCCCEEE SSNTTAGGIATGSGFGPMYLDYILGITKAYTTRVGSGPFPTELFDDVGAFLAKRGHEFGA CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCC TTGRARRCGWFDAVILRRAIEINSISGLCLTKLDVLDGLETINICVGYENEEGAVIDAPT CCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEEEEEEEECCCCCEEECCC DADSYLGLRPVYEQMPGWSESTLGAKTLEELPAAARAYIKRVEELVGAPIDIISTGPDRN CCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCC ETIVLRHPFG CEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA