Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
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Accession | NC_007005 |
Length | 6,093,698 |
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The map label for this gene is hflK [H]
Identifier: 66043841
GI number: 66043841
Start: 652290
End: 653492
Strand: Direct
Name: hflK [H]
Synonym: Psyr_0574
Alternate gene names: 66043841
Gene position: 652290-653492 (Clockwise)
Preceding gene: 66043840
Following gene: 66043842
Centisome position: 10.7
GC content: 59.93
Gene sequence:
>1203_bases ATGGCTTGGAATGAGCCGGGTGGCAACTCGAATAATCAAGATCCCTGGGGTGGCAAACGCCGTGGCGGCGACCGCAAGGG ACCACCTGATCTCGACGAGGCCTTCCGTAAGCTGCAGGAAAGCCTGAAGGGGTTGTTCGGCGGCGGTAACAAACGCGGCA GCGATGGCGGCAGCAGTGGCAGTGGTGGCGGTTCAGGCAAGGGCGGTGGCTTCGGTCTGCTCGGCATCGGGCTTGTCGTA CTCGTCGCTTTCTGGCTGTATAGCGCTATCTATGTGGTCGACGAGCAAGAGCAGGCTGTCGTGCTGCGTTTTGGTCAGTA CCACGAGACCGTGGGCCCGGGCCTTAACATCTACTTCCCGCCGTTCGATCGCAAGTACATGGAGAACGTGACTCGCGAGC GCGCCTACAGCAAGCAGGGCCAGATGCTCACCGAAGACGAGAACATCGTCGAAGTGCCGCTGACCGTGCAGTACAAGATC AGCGATCTTCAGGCGTTCGTGCTGAACGTCGATCAGCCTGAAATCAGCCTGCAGCACGCGACTGAAAGTGCGTTGCGTCA TGTCGTGGGTTCCACGGCGATGGATCAGGTCCTGACTGAAGGCCGCGAACTGATGGCCAGCGAAATCAAGGAGCGTCTGC AACGCTTCCTCGATACCTACCGCACCGGTATCACCGTGACCCAGGTGAACGTGCAGAGCGCCGCCGCGCCGCGTGAAGTG CAGGAAGCCTTTGATGACGTGATTCGCGCCCGTGAAGACGAGCAGCGTGCACGTAACCAGGCTGAAAGCTACGCCAATGG TGTGATCCCGGAAGCCCGTGGTCAGGCTCAGCGTATTCTTGAAGATGCCAACGGTTATCGCGATGAAGTGGTTTCGCGCG CCAAGGGTGAGGCGGATCGCTTTACCAAACTGGTTGCCGAGTACCGCAAGGCACCTGAAGTCACCCGCCAGCGTCTGTAT CTGGACACCATGCAGGAAGTCTTCAGCAACACCAGCAAGGTGCTCGTGACCGGCGACAAGGGGCAGAACAACCTGCTTTA CCTGCCGCTCGACAAGATGATCGAAAGCAGCCGCAGCGGTACCGGCAATGGCTCCAATTCAGGTACGCCATCGCAGTCAG CCAATGATGCTGCCGCTGCTGCCGCCGCCCGGGCGACTGAGGCTCAGCAGCGTGGTGAAGTACGTACCAGGGAGACTCGC TGA
Upstream 100 bases:
>100_bases ATAAAAGCACGAGAAAGCCGTTGTACGGCTTTCCCGAGCATTCTGTAGCATTGGTCGGCGCGCCGCGGGCGCGTCTTTGC TTTATCAGATGGAGAGCGCT
Downstream 100 bases:
>100_bases TGAGTAACAAATCACTGATCACCCTTATTGTCGGCGTGGTACTGGCGGTCATTGCCTGGAACAGCTTCTACATAGTGTCC CAGACCGAACGCGCTGTTCT
Product: HflK
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 400; Mature: 399
Protein sequence:
>400_residues MAWNEPGGNSNNQDPWGGKRRGGDRKGPPDLDEAFRKLQESLKGLFGGGNKRGSDGGSSGSGGGSGKGGGFGLLGIGLVV LVAFWLYSAIYVVDEQEQAVVLRFGQYHETVGPGLNIYFPPFDRKYMENVTRERAYSKQGQMLTEDENIVEVPLTVQYKI SDLQAFVLNVDQPEISLQHATESALRHVVGSTAMDQVLTEGRELMASEIKERLQRFLDTYRTGITVTQVNVQSAAAPREV QEAFDDVIRAREDEQRARNQAESYANGVIPEARGQAQRILEDANGYRDEVVSRAKGEADRFTKLVAEYRKAPEVTRQRLY LDTMQEVFSNTSKVLVTGDKGQNNLLYLPLDKMIESSRSGTGNGSNSGTPSQSANDAAAAAAARATEAQQRGEVRTRETR
Sequences:
>Translated_400_residues MAWNEPGGNSNNQDPWGGKRRGGDRKGPPDLDEAFRKLQESLKGLFGGGNKRGSDGGSSGSGGGSGKGGGFGLLGIGLVV LVAFWLYSAIYVVDEQEQAVVLRFGQYHETVGPGLNIYFPPFDRKYMENVTRERAYSKQGQMLTEDENIVEVPLTVQYKI SDLQAFVLNVDQPEISLQHATESALRHVVGSTAMDQVLTEGRELMASEIKERLQRFLDTYRTGITVTQVNVQSAAAPREV QEAFDDVIRAREDEQRARNQAESYANGVIPEARGQAQRILEDANGYRDEVVSRAKGEADRFTKLVAEYRKAPEVTRQRLY LDTMQEVFSNTSKVLVTGDKGQNNLLYLPLDKMIESSRSGTGNGSNSGTPSQSANDAAAAAAARATEAQQRGEVRTRETR >Mature_399_residues AWNEPGGNSNNQDPWGGKRRGGDRKGPPDLDEAFRKLQESLKGLFGGGNKRGSDGGSSGSGGGSGKGGGFGLLGIGLVVL VAFWLYSAIYVVDEQEQAVVLRFGQYHETVGPGLNIYFPPFDRKYMENVTRERAYSKQGQMLTEDENIVEVPLTVQYKIS DLQAFVLNVDQPEISLQHATESALRHVVGSTAMDQVLTEGRELMASEIKERLQRFLDTYRTGITVTQVNVQSAAAPREVQ EAFDDVIRAREDEQRARNQAESYANGVIPEARGQAQRILEDANGYRDEVVSRAKGEADRFTKLVAEYRKAPEVTRQRLYL DTMQEVFSNTSKVLVTGDKGQNNLLYLPLDKMIESSRSGTGNGSNSGTPSQSANDAAAAAAARATEAQQRGEVRTRETR
Specific function: HflC and HflK could encode or regulate a protease [H]
COG id: COG0330
COG function: function code O; Membrane protease subunits, stomatin/prohibitin homologs
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the band 7/mec-2 family. HflK subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790616, Length=380, Percent_Identity=42.3684210526316, Blast_Score=262, Evalue=3e-71, Organism=Escherichia coli, GI1786697, Length=256, Percent_Identity=26.5625, Blast_Score=65, Evalue=9e-12, Organism=Drosophila melanogaster, GI281365664, Length=185, Percent_Identity=27.5675675675676, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI62484274, Length=195, Percent_Identity=27.6923076923077, Blast_Score=67, Evalue=3e-11, Organism=Drosophila melanogaster, GI62484448, Length=185, Percent_Identity=27.5675675675676, Blast_Score=66, Evalue=5e-11, Organism=Drosophila melanogaster, GI24657857, Length=185, Percent_Identity=27.5675675675676, Blast_Score=65, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001107 - InterPro: IPR010201 - InterPro: IPR020980 - InterPro: IPR001972 [H]
Pfam domain/function: PF01145 Band_7; PF12221 HflK_N [H]
EC number: NA
Molecular weight: Translated: 43876; Mature: 43745
Theoretical pI: Translated: 5.25; Mature: 5.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAWNEPGGNSNNQDPWGGKRRGGDRKGPPDLDEAFRKLQESLKGLFGGGNKRGSDGGSSG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC SGGGSGKGGGFGLLGIGLVVLVAFWLYSAIYVVDEQEQAVVLRFGQYHETVGPGLNIYFP CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCEEHHHHHHHHHHHCCCCEEEEC PFDRKYMENVTRERAYSKQGQMLTEDENIVEVPLTVQYKISDLQAFVLNVDQPEISLQHA CCCHHHHHHHHHHHHHHHCCCEEECCCCEEEECEEEEEEHHHHHHHHEECCCCCHHHHHH TESALRHVVGSTAMDQVLTEGRELMASEIKERLQRFLDTYRTGITVTQVNVQSAAAPREV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHCCHHHH QEAFDDVIRAREDEQRARNQAESYANGVIPEARGQAQRILEDANGYRDEVVSRAKGEADR HHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCHHH FTKLVAEYRKAPEVTRQRLYLDTMQEVFSNTSKVLVTGDKGQNNLLYLPLDKMIESSRSG HHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEECHHHHHHHCCCC TGNGSNSGTPSQSANDAAAAAAARATEAQQRGEVRTRETR CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure AWNEPGGNSNNQDPWGGKRRGGDRKGPPDLDEAFRKLQESLKGLFGGGNKRGSDGGSSG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC SGGGSGKGGGFGLLGIGLVVLVAFWLYSAIYVVDEQEQAVVLRFGQYHETVGPGLNIYFP CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCEEHHHHHHHHHHHCCCCEEEEC PFDRKYMENVTRERAYSKQGQMLTEDENIVEVPLTVQYKISDLQAFVLNVDQPEISLQHA CCCHHHHHHHHHHHHHHHCCCEEECCCCEEEECEEEEEEHHHHHHHHEECCCCCHHHHHH TESALRHVVGSTAMDQVLTEGRELMASEIKERLQRFLDTYRTGITVTQVNVQSAAAPREV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHCCHHHH QEAFDDVIRAREDEQRARNQAESYANGVIPEARGQAQRILEDANGYRDEVVSRAKGEADR HHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCHHH FTKLVAEYRKAPEVTRQRLYLDTMQEVFSNTSKVLVTGDKGQNNLLYLPLDKMIESSRSG HHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEECHHHHHHHCCCC TGNGSNSGTPSQSANDAAAAAAARATEAQQRGEVRTRETR CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Hydrolase; Acting on peptide bonds (Peptidases) [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]