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The map label for this gene is yjeF [H]

Identifier: 66043834

GI number: 66043834

Start: 644229

End: 645719

Strand: Direct

Name: yjeF [H]

Synonym: Psyr_0567

Alternate gene names: 66043834

Gene position: 644229-645719 (Clockwise)

Preceding gene: 66043832

Following gene: 66043835

Centisome position: 10.57

GC content: 65.59

Gene sequence:

>1491_bases
ATGTTCGACACTAAACCTCATTTACCCGACGCGCTGTACAGCGCTGCGCAGGTCCGCGACCTCGACGCACGGCTGATTGC
GGCCGGTACACCCGGCCTGGAATTGATGCTGCGTGCCGCGCAGGCGTTGTGGCACACGCTACTTCGGCGCTGGCCTCAGG
CCAACGAGCTGACCGTATTGACCGGGCGTGGTAACAACGCCGGTGACGGGTATCTGGTGGCTGCAATGGCGCACAAGGCC
GGCTGGCAGGTCAGGGTGCTGGCCGTCGGCGACCCGGCTGCACTGACCGGTGATGCTGCGGCGGCGCATGCTGCGGCTTT
CGGTATTGATATTCAGGCATGGGCCGGGCAGTCGCTGGCCGGTGTCGTGCTGGATGCCTTGCTCGGTACCGGGCTCGACG
GCGAGGTGCGCGAGCCCTATGTCTCGGCCATCAAGGCTGTCAACGACAGTGGTCTGCCCGTCGTGGCGGCGGATATTCCG
TCTGGCTTGAGCGCAGATACCGGCCAGACGCTGGGTGTCGCGGTGCGTGCCGATGTGACCGTTACGTTCATCGGCCTCAA
ACTGGGGTTGCTGACGGGGGATGCGGCGGATCTGGTGGGTGAGCTGATTTTCGACGACCTGCGAGCAGACCCGGCGCTGG
TGGCGCAGATGCCGTTCAGCGCGAAGCGCCTCGATAAACACAACCTGCCACAACTGGCAGCGCGTCCGCGGACCGCTCAT
AAAGGCATGTTTGGCCGCGTGCTGGTCATCGGTGGCGATCACGGTTTTGGTGGTGCCGCGTTGCTCAGCGCCGAAAGCGC
CCTGCGCAGCGGTGCAGGCATGCTGACGCTGGCCACACGGCCCGAGCACGTTGCGGCCGCCCTGACGCGCATGCCGGAGA
TCATGAGCGCGGCAATTCATTCGGCCAACCAGCTGATGGGCTTGATCGAGCCAGCCAGCGTGCTGGTGGTCGGCCCCGGA
CTGGGGCAGTCGGCCTGGGGGCGCAGCCTGCTGTCGGCAGCCGCCAATGCGGATCGTCCGCAGGTGTGGGACGCCGATGC
GCTGAATATGCTGGCCGCCGGGCTGGTCAGCCTGCCCAAAGGCAGTGTCATCACCCCGCATCCGGGCGAGGCGGCACGCT
TGCTGGGCGTGGGCATCAAGGAGGTTCAGGCGGACCGGGCCGCTGCAGTACGAGCGCTGGCGCGTAAATTCGATACGGTT
TGTGTGCTCAAGGGCTCCGGCAGCCTGATTGCCGACGCGCACGGGCAACTGGCGCTGTGCGACCGCGGTCATCCGGCCAT
GGCCACTGCGGGACTGGGTGACGTGCTGGCCGGATTGATCGGTGCGCTGATGGCGCAGCATCTCAAGCCATTCGACGCGG
CCTGTCTGGCGGTATGGCTGCACGCAAGCGCCGGTCAGAAAGTCGGCGAGTACGGTCGCGGGTTGGCCGCCAGCGATATT
ATTCCTGCCATTCGTCAGTTACTGGAGGAGCTGCAACCGTGTCTGATTTAA

Upstream 100 bases:

>100_bases
CATCGGAAGTGGGAAGTACAGCAGTAATAGCGGACATGCGCAGAGAGAAACCGGGGCCAAGGTGCGTATAATTCTGCCAG
ACATCGGAGCCCATAGACGC

Downstream 100 bases:

>100_bases
CGCTGCATGTGGTTGGCGAAGAGGCAATGATGGATTTTGGTGCACGCCTGGCCAAGGTTACAGAAGGCCTTGGCGTCATC
TTTCTGGATGGCGATCTGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 496; Mature: 496

Protein sequence:

>496_residues
MFDTKPHLPDALYSAAQVRDLDARLIAAGTPGLELMLRAAQALWHTLLRRWPQANELTVLTGRGNNAGDGYLVAAMAHKA
GWQVRVLAVGDPAALTGDAAAAHAAAFGIDIQAWAGQSLAGVVLDALLGTGLDGEVREPYVSAIKAVNDSGLPVVAADIP
SGLSADTGQTLGVAVRADVTVTFIGLKLGLLTGDAADLVGELIFDDLRADPALVAQMPFSAKRLDKHNLPQLAARPRTAH
KGMFGRVLVIGGDHGFGGAALLSAESALRSGAGMLTLATRPEHVAAALTRMPEIMSAAIHSANQLMGLIEPASVLVVGPG
LGQSAWGRSLLSAAANADRPQVWDADALNMLAAGLVSLPKGSVITPHPGEAARLLGVGIKEVQADRAAAVRALARKFDTV
CVLKGSGSLIADAHGQLALCDRGHPAMATAGLGDVLAGLIGALMAQHLKPFDAACLAVWLHASAGQKVGEYGRGLAASDI
IPAIRQLLEELQPCLI

Sequences:

>Translated_496_residues
MFDTKPHLPDALYSAAQVRDLDARLIAAGTPGLELMLRAAQALWHTLLRRWPQANELTVLTGRGNNAGDGYLVAAMAHKA
GWQVRVLAVGDPAALTGDAAAAHAAAFGIDIQAWAGQSLAGVVLDALLGTGLDGEVREPYVSAIKAVNDSGLPVVAADIP
SGLSADTGQTLGVAVRADVTVTFIGLKLGLLTGDAADLVGELIFDDLRADPALVAQMPFSAKRLDKHNLPQLAARPRTAH
KGMFGRVLVIGGDHGFGGAALLSAESALRSGAGMLTLATRPEHVAAALTRMPEIMSAAIHSANQLMGLIEPASVLVVGPG
LGQSAWGRSLLSAAANADRPQVWDADALNMLAAGLVSLPKGSVITPHPGEAARLLGVGIKEVQADRAAAVRALARKFDTV
CVLKGSGSLIADAHGQLALCDRGHPAMATAGLGDVLAGLIGALMAQHLKPFDAACLAVWLHASAGQKVGEYGRGLAASDI
IPAIRQLLEELQPCLI
>Mature_496_residues
MFDTKPHLPDALYSAAQVRDLDARLIAAGTPGLELMLRAAQALWHTLLRRWPQANELTVLTGRGNNAGDGYLVAAMAHKA
GWQVRVLAVGDPAALTGDAAAAHAAAFGIDIQAWAGQSLAGVVLDALLGTGLDGEVREPYVSAIKAVNDSGLPVVAADIP
SGLSADTGQTLGVAVRADVTVTFIGLKLGLLTGDAADLVGELIFDDLRADPALVAQMPFSAKRLDKHNLPQLAARPRTAH
KGMFGRVLVIGGDHGFGGAALLSAESALRSGAGMLTLATRPEHVAAALTRMPEIMSAAIHSANQLMGLIEPASVLVVGPG
LGQSAWGRSLLSAAANADRPQVWDADALNMLAAGLVSLPKGSVITPHPGEAARLLGVGIKEVQADRAAAVRALARKFDTV
CVLKGSGSLIADAHGQLALCDRGHPAMATAGLGDVLAGLIGALMAQHLKPFDAACLAVWLHASAGQKVGEYGRGLAASDI
IPAIRQLLEELQPCLI

Specific function: Unknown

COG id: COG0063

COG function: function code G; Predicted sugar kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 YjeF N-terminal domain [H]

Homologues:

Organism=Escherichia coli, GI1790609, Length=468, Percent_Identity=42.7350427350427, Blast_Score=319, Evalue=2e-88,
Organism=Caenorhabditis elegans, GI17554656, Length=288, Percent_Identity=26.0416666666667, Blast_Score=83, Evalue=3e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017953
- InterPro:   IPR000631
- InterPro:   IPR004443 [H]

Pfam domain/function: PF01256 Carb_kinase; PF03853 YjeF_N [H]

EC number: NA

Molecular weight: Translated: 50955; Mature: 50955

Theoretical pI: Translated: 6.63; Mature: 6.63

Prosite motif: PS00217 SUGAR_TRANSPORT_2 ; PS01050 UPF0031_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFDTKPHLPDALYSAAQVRDLDARLIAAGTPGLELMLRAAQALWHTLLRRWPQANELTVL
CCCCCCCCCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEE
TGRGNNAGDGYLVAAMAHKAGWQVRVLAVGDPAALTGDAAAAHAAAFGIDIQAWAGQSLA
EECCCCCCCCEEEEEEHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHCCEEEHHCCCHHH
GVVLDALLGTGLDGEVREPYVSAIKAVNDSGLPVVAADIPSGLSADTGQTLGVAVRADVT
HHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCEEEEEEECEE
VTFIGLKLGLLTGDAADLVGELIFDDLRADPALVAQMPFSAKRLDKHNLPQLAARPRTAH
EEEEEEEEEEECCCHHHHHHHHHHHHHCCCCHHEEECCCCHHHCCCCCCCHHHCCCCHHH
KGMFGRVLVIGGDHGFGGAALLSAESALRSGAGMLTLATRPEHVAAALTRMPEIMSAAIH
CCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHH
SANQLMGLIEPASVLVVGPGLGQSAWGRSLLSAAANADRPQVWDADALNMLAAGLVSLPK
HHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCC
GSVITPHPGEAARLLGVGIKEVQADRAAAVRALARKFDTVCVLKGSGSLIADAHGQLALC
CCEECCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHCCEEEEEECCCCEEEECCCCEEEE
DRGHPAMATAGLGDVLAGLIGALMAQHLKPFDAACLAVWLHASAGQKVGEYGRGLAASDI
CCCCCCHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHCCCCCHHHH
IPAIRQLLEELQPCLI
HHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFDTKPHLPDALYSAAQVRDLDARLIAAGTPGLELMLRAAQALWHTLLRRWPQANELTVL
CCCCCCCCCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEE
TGRGNNAGDGYLVAAMAHKAGWQVRVLAVGDPAALTGDAAAAHAAAFGIDIQAWAGQSLA
EECCCCCCCCEEEEEEHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHCCEEEHHCCCHHH
GVVLDALLGTGLDGEVREPYVSAIKAVNDSGLPVVAADIPSGLSADTGQTLGVAVRADVT
HHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCEEEEEEECEE
VTFIGLKLGLLTGDAADLVGELIFDDLRADPALVAQMPFSAKRLDKHNLPQLAARPRTAH
EEEEEEEEEEECCCHHHHHHHHHHHHHCCCCHHEEECCCCHHHCCCCCCCHHHCCCCHHH
KGMFGRVLVIGGDHGFGGAALLSAESALRSGAGMLTLATRPEHVAAALTRMPEIMSAAIH
CCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHH
SANQLMGLIEPASVLVVGPGLGQSAWGRSLLSAAANADRPQVWDADALNMLAAGLVSLPK
HHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCC
GSVITPHPGEAARLLGVGIKEVQADRAAAVRALARKFDTVCVLKGSGSLIADAHGQLALC
CCEECCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHCCEEEEEECCCCEEEECCCCEEEE
DRGHPAMATAGLGDVLAGLIGALMAQHLKPFDAACLAVWLHASAGQKVGEYGRGLAASDI
CCCCCCHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHCCCCCHHHH
IPAIRQLLEELQPCLI
HHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503; 7511774 [H]