Definition Pseudomonas syringae pv. syringae B728a, complete genome.
Accession NC_007005
Length 6,093,698

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The map label for this gene is yqiA [H]

Identifier: 66043817

GI number: 66043817

Start: 621807

End: 622424

Strand: Direct

Name: yqiA [H]

Synonym: Psyr_0550

Alternate gene names: 66043817

Gene position: 621807-622424 (Clockwise)

Preceding gene: 66043816

Following gene: 66043818

Centisome position: 10.2

GC content: 60.68

Gene sequence:

>618_bases
GTGACGAGCGACACACCTTCACTGCTATACATCCATGGCTTGAACAGCTCGAACCTGTCGAGAAAGGCCTGTCAGCTCAG
CGCGCTGATGAAATCCCTGGGTCTGGCTGATCGTCTGCAAGTCCCTGAACTGCATCACCATCCGCGTCAGGCCATGCTCC
AGCTTGAAGCGGCCATCACGGCGCTGGGACGGCCATTACTGGTCGGCAGCTCCCTCGGCGGCTACTATGCGACTCATTTG
GCGCAGCGGCACGGCCTCAAGGCGGTGCTGATCAACCCGGCAGTCAATCCGCATCAGCTGTTCGACGGGTTTCTCGGCGT
GCAACAGAACCTGTACACCGGCGAGCAGTGGCAGTTGACCGAAGACCATATTCGGGCGCTGGCCGAGCTGGAGGTACCCG
CGCCGCAGGATCCGCAGCAGTTTCAGGTGTGGTTGCAGACCGGTGACGAGACGCTCGATTATCGTCGTGCCGAGAAGTTT
TACCGCAGCTGCGCCTTGCGTATTCAGGCGGGCGGCGACCACAGCTTTCAGGGCTTTGCCGAGCACATGCCAGCACTGCT
GACCGTTGCCGGATTTGCCCCCGATCTGTTGCAGAAGATCGATCTGTCGGCGCTGTAG

Upstream 100 bases:

>100_bases
ACCGGCTATTGATCGGGCAGGCGGATACGTTTCCGGTGAGGTGCTGTAGCGCAAGTCCCTGTAAACTACACGGCTTTGCC
TTGCACCCGGGAGCAACAGC

Downstream 100 bases:

>100_bases
GTGATCGATGCCCGGTCACATGAATGCAAGAACATTGAACCCCCGAAATTCCATGAAAGATTGATATCGAGAACCCATGG
CCAATCCCAGCGCTAGCTCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 205; Mature: 204

Protein sequence:

>205_residues
MTSDTPSLLYIHGLNSSNLSRKACQLSALMKSLGLADRLQVPELHHHPRQAMLQLEAAITALGRPLLVGSSLGGYYATHL
AQRHGLKAVLINPAVNPHQLFDGFLGVQQNLYTGEQWQLTEDHIRALAELEVPAPQDPQQFQVWLQTGDETLDYRRAEKF
YRSCALRIQAGGDHSFQGFAEHMPALLTVAGFAPDLLQKIDLSAL

Sequences:

>Translated_205_residues
MTSDTPSLLYIHGLNSSNLSRKACQLSALMKSLGLADRLQVPELHHHPRQAMLQLEAAITALGRPLLVGSSLGGYYATHL
AQRHGLKAVLINPAVNPHQLFDGFLGVQQNLYTGEQWQLTEDHIRALAELEVPAPQDPQQFQVWLQTGDETLDYRRAEKF
YRSCALRIQAGGDHSFQGFAEHMPALLTVAGFAPDLLQKIDLSAL
>Mature_204_residues
TSDTPSLLYIHGLNSSNLSRKACQLSALMKSLGLADRLQVPELHHHPRQAMLQLEAAITALGRPLLVGSSLGGYYATHLA
QRHGLKAVLINPAVNPHQLFDGFLGVQQNLYTGEQWQLTEDHIRALAELEVPAPQDPQQFQVWLQTGDETLDYRRAEKFY
RSCALRIQAGGDHSFQGFAEHMPALLTVAGFAPDLLQKIDLSAL

Specific function: Displays esterase activity toward palmitoyl-CoA and pNP- butyrate [H]

COG id: COG3150

COG function: function code R; Predicted esterase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789409, Length=188, Percent_Identity=39.3617021276596, Blast_Score=128, Evalue=2e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008886 [H]

Pfam domain/function: PF05728 UPF0227 [H]

EC number: NA

Molecular weight: Translated: 22657; Mature: 22526

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSDTPSLLYIHGLNSSNLSRKACQLSALMKSLGLADRLQVPELHHHPRQAMLQLEAAIT
CCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCHHHCCCCHHHCCHHHHHHHHHHHHH
ALGRPLLVGSSLGGYYATHLAQRHGLKAVLINPAVNPHQLFDGFLGVQQNLYTGEQWQLT
HHCCCEEECCCCCHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCEEC
EDHIRALAELEVPAPQDPQQFQVWLQTGDETLDYRRAEKFYRSCALRIQAGGDHSFQGFA
HHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHEEEECCCCCCHHHHH
EHMPALLTVAGFAPDLLQKIDLSAL
HHHHHHHHHHCCCHHHHHHHCCCCC
>Mature Secondary Structure 
TSDTPSLLYIHGLNSSNLSRKACQLSALMKSLGLADRLQVPELHHHPRQAMLQLEAAIT
CCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCHHHCCCCHHHCCHHHHHHHHHHHHH
ALGRPLLVGSSLGGYYATHLAQRHGLKAVLINPAVNPHQLFDGFLGVQQNLYTGEQWQLT
HHCCCEEECCCCCHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCEEC
EDHIRALAELEVPAPQDPQQFQVWLQTGDETLDYRRAEKFYRSCALRIQAGGDHSFQGFA
HHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHEEEECCCCCCHHHHH
EHMPALLTVAGFAPDLLQKIDLSAL
HHHHHHHHHHCCCHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]