Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
---|---|
Accession | NC_007005 |
Length | 6,093,698 |
Click here to switch to the map view.
The map label for this gene is yqiA [H]
Identifier: 66043817
GI number: 66043817
Start: 621807
End: 622424
Strand: Direct
Name: yqiA [H]
Synonym: Psyr_0550
Alternate gene names: 66043817
Gene position: 621807-622424 (Clockwise)
Preceding gene: 66043816
Following gene: 66043818
Centisome position: 10.2
GC content: 60.68
Gene sequence:
>618_bases GTGACGAGCGACACACCTTCACTGCTATACATCCATGGCTTGAACAGCTCGAACCTGTCGAGAAAGGCCTGTCAGCTCAG CGCGCTGATGAAATCCCTGGGTCTGGCTGATCGTCTGCAAGTCCCTGAACTGCATCACCATCCGCGTCAGGCCATGCTCC AGCTTGAAGCGGCCATCACGGCGCTGGGACGGCCATTACTGGTCGGCAGCTCCCTCGGCGGCTACTATGCGACTCATTTG GCGCAGCGGCACGGCCTCAAGGCGGTGCTGATCAACCCGGCAGTCAATCCGCATCAGCTGTTCGACGGGTTTCTCGGCGT GCAACAGAACCTGTACACCGGCGAGCAGTGGCAGTTGACCGAAGACCATATTCGGGCGCTGGCCGAGCTGGAGGTACCCG CGCCGCAGGATCCGCAGCAGTTTCAGGTGTGGTTGCAGACCGGTGACGAGACGCTCGATTATCGTCGTGCCGAGAAGTTT TACCGCAGCTGCGCCTTGCGTATTCAGGCGGGCGGCGACCACAGCTTTCAGGGCTTTGCCGAGCACATGCCAGCACTGCT GACCGTTGCCGGATTTGCCCCCGATCTGTTGCAGAAGATCGATCTGTCGGCGCTGTAG
Upstream 100 bases:
>100_bases ACCGGCTATTGATCGGGCAGGCGGATACGTTTCCGGTGAGGTGCTGTAGCGCAAGTCCCTGTAAACTACACGGCTTTGCC TTGCACCCGGGAGCAACAGC
Downstream 100 bases:
>100_bases GTGATCGATGCCCGGTCACATGAATGCAAGAACATTGAACCCCCGAAATTCCATGAAAGATTGATATCGAGAACCCATGG CCAATCCCAGCGCTAGCTCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 205; Mature: 204
Protein sequence:
>205_residues MTSDTPSLLYIHGLNSSNLSRKACQLSALMKSLGLADRLQVPELHHHPRQAMLQLEAAITALGRPLLVGSSLGGYYATHL AQRHGLKAVLINPAVNPHQLFDGFLGVQQNLYTGEQWQLTEDHIRALAELEVPAPQDPQQFQVWLQTGDETLDYRRAEKF YRSCALRIQAGGDHSFQGFAEHMPALLTVAGFAPDLLQKIDLSAL
Sequences:
>Translated_205_residues MTSDTPSLLYIHGLNSSNLSRKACQLSALMKSLGLADRLQVPELHHHPRQAMLQLEAAITALGRPLLVGSSLGGYYATHL AQRHGLKAVLINPAVNPHQLFDGFLGVQQNLYTGEQWQLTEDHIRALAELEVPAPQDPQQFQVWLQTGDETLDYRRAEKF YRSCALRIQAGGDHSFQGFAEHMPALLTVAGFAPDLLQKIDLSAL >Mature_204_residues TSDTPSLLYIHGLNSSNLSRKACQLSALMKSLGLADRLQVPELHHHPRQAMLQLEAAITALGRPLLVGSSLGGYYATHLA QRHGLKAVLINPAVNPHQLFDGFLGVQQNLYTGEQWQLTEDHIRALAELEVPAPQDPQQFQVWLQTGDETLDYRRAEKFY RSCALRIQAGGDHSFQGFAEHMPALLTVAGFAPDLLQKIDLSAL
Specific function: Displays esterase activity toward palmitoyl-CoA and pNP- butyrate [H]
COG id: COG3150
COG function: function code R; Predicted esterase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789409, Length=188, Percent_Identity=39.3617021276596, Blast_Score=128, Evalue=2e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008886 [H]
Pfam domain/function: PF05728 UPF0227 [H]
EC number: NA
Molecular weight: Translated: 22657; Mature: 22526
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSDTPSLLYIHGLNSSNLSRKACQLSALMKSLGLADRLQVPELHHHPRQAMLQLEAAIT CCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCHHHCCCCHHHCCHHHHHHHHHHHHH ALGRPLLVGSSLGGYYATHLAQRHGLKAVLINPAVNPHQLFDGFLGVQQNLYTGEQWQLT HHCCCEEECCCCCHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCEEC EDHIRALAELEVPAPQDPQQFQVWLQTGDETLDYRRAEKFYRSCALRIQAGGDHSFQGFA HHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHEEEECCCCCCHHHHH EHMPALLTVAGFAPDLLQKIDLSAL HHHHHHHHHHCCCHHHHHHHCCCCC >Mature Secondary Structure TSDTPSLLYIHGLNSSNLSRKACQLSALMKSLGLADRLQVPELHHHPRQAMLQLEAAIT CCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCHHHCCCCHHHCCHHHHHHHHHHHHH ALGRPLLVGSSLGGYYATHLAQRHGLKAVLINPAVNPHQLFDGFLGVQQNLYTGEQWQLT HHCCCEEECCCCCHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCEEC EDHIRALAELEVPAPQDPQQFQVWLQTGDETLDYRRAEKFYRSCALRIQAGGDHSFQGFA HHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHEEEECCCCCCHHHHH EHMPALLTVAGFAPDLLQKIDLSAL HHHHHHHHHHCCCHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]