Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
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Accession | NC_007005 |
Length | 6,093,698 |
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The map label for this gene is icc [H]
Identifier: 66043816
GI number: 66043816
Start: 620912
End: 621718
Strand: Direct
Name: icc [H]
Synonym: Psyr_0549
Alternate gene names: 66043816
Gene position: 620912-621718 (Clockwise)
Preceding gene: 66043815
Following gene: 66043817
Centisome position: 10.19
GC content: 60.22
Gene sequence:
>807_bases TTGCCGAGCGCAGCCCTTTCGTCGTCAGTTTTGCTGGTCCAGCTATCCGACAGCCACTTGTTCGCCGAGGCGGACGGTGC ATTGTTGGGTATGAGCACCCGCGACAGTCTGGAAAAAGTCGTTGATCGAGTGCTGGCCGAGCAGCCACACATCGATCTTG TGGTCGCCAGCGGCGATATCTCCCAAGACGGCAGCGTCGAGTCTTACGAAGCGTTTCGTCGGATAAGCGGGCGGATCGAT GCGCCAGCGCGCTGGTTCGCCGGTAATCACGACGAACTGCCGCAGATGGAGCAGGTTGCGCAGCATAACGGGCTGCTCGA CCCTGTGGTGGATATCGGTCAATGGCGGGTGACGCTGCTGGATTCGGCGGTGCCTGGTTCGGTGCCGGGTTTTCTCGCGG ACACGCAATTGCAGTTGCTGGAGCAGTCGCTGAGCGAAGCGCCTGATCGGCATCATCTGATCTGTTTGCACCATCACCCG GTCGCTATTGGTTGTGAGTGGATGGCGCCGATCGGCTTGCGCAATGCCGATGCGTTATTTTCTGTGCTCGATCGTTTTGC ACAGGTTCGCGCCATACTGTGGGGACATGTGCATCAGGAGTTCGACCAGATGCGTAACGGTGTGCGCCTGCTGGCGTCGC CTTCGACCTGCATTCAATTCGCCCCGGGCAGTGCCGATTTCAAGGTGGACACCACGGCGCCGGGCTATCGCTGGCTGCGA CTGCACGACGATGGACGGCTGGAAACGGCTGTTTCCCGAGTGGTCGGCCTGGAATTCGAGGTCGATTACGGCGGCACCGG CTATTGA
Upstream 100 bases:
>100_bases TCAGCAAATGTGACCAAATGCTCGTCCGTACGCACATTCCCGGTTTACCCGCCCGTTGCCGCATCACATAATCGCGCTGA ATCCTCTCTGGGAGACGGTC
Downstream 100 bases:
>100_bases TCGGGCAGGCGGATACGTTTCCGGTGAGGTGCTGTAGCGCAAGTCCCTGTAAACTACACGGCTTTGCCTTGCACCCGGGA GCAACAGCGTGACGAGCGAC
Product: metallophosphoesterase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 268; Mature: 267
Protein sequence:
>268_residues MPSAALSSSVLLVQLSDSHLFAEADGALLGMSTRDSLEKVVDRVLAEQPHIDLVVASGDISQDGSVESYEAFRRISGRID APARWFAGNHDELPQMEQVAQHNGLLDPVVDIGQWRVTLLDSAVPGSVPGFLADTQLQLLEQSLSEAPDRHHLICLHHHP VAIGCEWMAPIGLRNADALFSVLDRFAQVRAILWGHVHQEFDQMRNGVRLLASPSTCIQFAPGSADFKVDTTAPGYRWLR LHDDGRLETAVSRVVGLEFEVDYGGTGY
Sequences:
>Translated_268_residues MPSAALSSSVLLVQLSDSHLFAEADGALLGMSTRDSLEKVVDRVLAEQPHIDLVVASGDISQDGSVESYEAFRRISGRID APARWFAGNHDELPQMEQVAQHNGLLDPVVDIGQWRVTLLDSAVPGSVPGFLADTQLQLLEQSLSEAPDRHHLICLHHHP VAIGCEWMAPIGLRNADALFSVLDRFAQVRAILWGHVHQEFDQMRNGVRLLASPSTCIQFAPGSADFKVDTTAPGYRWLR LHDDGRLETAVSRVVGLEFEVDYGGTGY >Mature_267_residues PSAALSSSVLLVQLSDSHLFAEADGALLGMSTRDSLEKVVDRVLAEQPHIDLVVASGDISQDGSVESYEAFRRISGRIDA PARWFAGNHDELPQMEQVAQHNGLLDPVVDIGQWRVTLLDSAVPGSVPGFLADTQLQLLEQSLSEAPDRHHLICLHHHPV AIGCEWMAPIGLRNADALFSVLDRFAQVRAILWGHVHQEFDQMRNGVRLLASPSTCIQFAPGSADFKVDTTAPGYRWLRL HDDGRLETAVSRVVGLEFEVDYGGTGY
Specific function: Affects the expression of the lacZ gene [H]
COG id: COG1409
COG function: function code R; Predicted phosphohydrolases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789410, Length=264, Percent_Identity=44.6969696969697, Blast_Score=202, Evalue=1e-53,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013622 - InterPro: IPR004843 - ProDom: PD587589 [H]
Pfam domain/function: PF00149 Metallophos; PF08413 Metallophos_C [H]
EC number: NA
Molecular weight: Translated: 29351; Mature: 29220
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSAALSSSVLLVQLSDSHLFAEADGALLGMSTRDSLEKVVDRVLAEQPHIDLVVASGDI CCCCCCCCCEEEEEECCCEEEEECCCCEEECCCHHHHHHHHHHHHHCCCCEEEEEECCCC SQDGSVESYEAFRRISGRIDAPARWFAGNHDELPQMEQVAQHNGLLDPVVDIGQWRVTLL CCCCCHHHHHHHHHHCCCCCCCHHHCCCCCCCCHHHHHHHHHCCCCCHHHHCCCEEEEEE DSAVPGSVPGFLADTQLQLLEQSLSEAPDRHHLICLHHHPVAIGCEWMAPIGLRNADALF CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEECEEECCCCCCCHHHHH SVLDRFAQVRAILWGHVHQEFDQMRNGVRLLASPSTCIQFAPGSADFKVDTTAPGYRWLR HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCEEEECCCCCCEEEECCCCCEEEEE LHDDGRLETAVSRVVGLEFEVDYGGTGY ECCCCCHHHHHHHHHCCEEEECCCCCCC >Mature Secondary Structure PSAALSSSVLLVQLSDSHLFAEADGALLGMSTRDSLEKVVDRVLAEQPHIDLVVASGDI CCCCCCCCEEEEEECCCEEEEECCCCEEECCCHHHHHHHHHHHHHCCCCEEEEEECCCC SQDGSVESYEAFRRISGRIDAPARWFAGNHDELPQMEQVAQHNGLLDPVVDIGQWRVTLL CCCCCHHHHHHHHHHCCCCCCCHHHCCCCCCCCHHHHHHHHHCCCCCHHHHCCCEEEEEE DSAVPGSVPGFLADTQLQLLEQSLSEAPDRHHLICLHHHPVAIGCEWMAPIGLRNADALF CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEECEEECCCCCCCHHHHH SVLDRFAQVRAILWGHVHQEFDQMRNGVRLLASPSTCIQFAPGSADFKVDTTAPGYRWLR HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCEEEECCCCCCEEEECCCCCEEEEE LHDDGRLETAVSRVVGLEFEVDYGGTGY ECCCCCHHHHHHHHHCCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]