Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
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Accession | NC_007005 |
Length | 6,093,698 |
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The map label for this gene is 66043791
Identifier: 66043791
GI number: 66043791
Start: 586426
End: 587160
Strand: Direct
Name: 66043791
Synonym: Psyr_0524
Alternate gene names: NA
Gene position: 586426-587160 (Clockwise)
Preceding gene: 66043790
Following gene: 66043792
Centisome position: 9.62
GC content: 58.78
Gene sequence:
>735_bases ATGGCGGGCTGGAAGCTCGAGCCCGAGTACGCGTTCCTGGAACAGGAATTCGGTAGCCTGGATGCCGTATTTGCCCTGCA GGGACAGCAGTTGACCCGCGACCCGCTGTCCGACGTCATTCGCGTCGAGCGCGCCGGGGTTTACTACTACGTCAAACGCT ACGTGGGCGCGGGCAAGGGCCTACGTCGCTATATGGGCAAGCCGAGGGTCAAGTCCGAATGGCAGAACCTCAAGCGCTTT GCCAAATGGGGCATTCCCACCGCAGAAGTCGTGGCCTGGGGGCTGGAGCGCAACGGCGCGGCGTATGATCGCGGCGCACT GATCACGCGAGGCTTGCCGAACACTGAAGACTTGTCGGCACTGGCGCAACGCAAGGATCCGCGACTGGCCGACCGCCACT GGGTCGATGCAGTCAGTCGCCAATTGGCTGCCTTTACCCGGATCATGCACGACAACCATTTCACGCATAACGATTTGAAA TGGCGCAACCTGTTGGTCGATAACGAGGGCAAGCTGTTTTTCATCGATTGCCCCAATGGTGCATTCTGGTGGAGCTTCAT GCTGCGCTATCGGATCACCAAGGATCTGGCCTGCCTGGACAAGGTCGCCAAGTATCATTTGTCAGCCACCCAGCGCCTGC GCTTCTACCTGCAATACCGCCAGCGAACGCGTTTGAACGCCTCCGACAAGAAACGTATTCGACATATCGTCAGCTTTTTC GAGGGCCGTGAATGA
Upstream 100 bases:
>100_bases TGCGCGAAATCCTGCTCAAGGAAGCGACGTTGCTGACCTGGCTGGATAAAAAAGCCGACAAGTTGTATCAGCGCAAAGTG CGCTACGGAGACGCTCTCTG
Downstream 100 bases:
>100_bases GCGTTTTTATTGCCAGTGCCGACCAGCCTTTACTGGCGCGTCACAACCTGGCTGATTTTGAATCGCTTTGGAACATCAGG CTTGATGCGGTCGATGAGCC
Product: lipopolysaccharide kinase
Products: NA
Alternate protein names: Lipopolysaccharide Kinase; Serine/Threonine Protein Kinase; Mn2+-Dependent Serine/Threonine Protein Kinase
Number of amino acids: Translated: 244; Mature: 243
Protein sequence:
>244_residues MAGWKLEPEYAFLEQEFGSLDAVFALQGQQLTRDPLSDVIRVERAGVYYYVKRYVGAGKGLRRYMGKPRVKSEWQNLKRF AKWGIPTAEVVAWGLERNGAAYDRGALITRGLPNTEDLSALAQRKDPRLADRHWVDAVSRQLAAFTRIMHDNHFTHNDLK WRNLLVDNEGKLFFIDCPNGAFWWSFMLRYRITKDLACLDKVAKYHLSATQRLRFYLQYRQRTRLNASDKKRIRHIVSFF EGRE
Sequences:
>Translated_244_residues MAGWKLEPEYAFLEQEFGSLDAVFALQGQQLTRDPLSDVIRVERAGVYYYVKRYVGAGKGLRRYMGKPRVKSEWQNLKRF AKWGIPTAEVVAWGLERNGAAYDRGALITRGLPNTEDLSALAQRKDPRLADRHWVDAVSRQLAAFTRIMHDNHFTHNDLK WRNLLVDNEGKLFFIDCPNGAFWWSFMLRYRITKDLACLDKVAKYHLSATQRLRFYLQYRQRTRLNASDKKRIRHIVSFF EGRE >Mature_243_residues AGWKLEPEYAFLEQEFGSLDAVFALQGQQLTRDPLSDVIRVERAGVYYYVKRYVGAGKGLRRYMGKPRVKSEWQNLKRFA KWGIPTAEVVAWGLERNGAAYDRGALITRGLPNTEDLSALAQRKDPRLADRHWVDAVSRQLAAFTRIMHDNHFTHNDLKW RNLLVDNEGKLFFIDCPNGAFWWSFMLRYRITKDLACLDKVAKYHLSATQRLRFYLQYRQRTRLNASDKKRIRHIVSFFE GRE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28650; Mature: 28519
Theoretical pI: Translated: 10.42; Mature: 10.42
Prosite motif: PS00108 PROTEIN_KINASE_ST
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGWKLEPEYAFLEQEFGSLDAVFALQGQQLTRDPLSDVIRVERAGVYYYVKRYVGAGKG CCCCCCCCHHHHHHHHHCCHHEEEEECCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHH LRRYMGKPRVKSEWQNLKRFAKWGIPTAEVVAWGLERNGAAYDRGALITRGLPNTEDLSA HHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCEEECCCCCHHHHHH LAQRKDPRLADRHWVDAVSRQLAAFTRIMHDNHFTHNDLKWRNLLVDNEGKLFFIDCPNG HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHEEEECCCCEEEEECCCC AFWWSFMLRYRITKDLACLDKVAKYHLSATQRLRFYLQYRQRTRLNASDKKRIRHIVSFF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH EGRE CCCC >Mature Secondary Structure AGWKLEPEYAFLEQEFGSLDAVFALQGQQLTRDPLSDVIRVERAGVYYYVKRYVGAGKG CCCCCCCHHHHHHHHHCCHHEEEEECCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHH LRRYMGKPRVKSEWQNLKRFAKWGIPTAEVVAWGLERNGAAYDRGALITRGLPNTEDLSA HHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCEEECCCCCHHHHHH LAQRKDPRLADRHWVDAVSRQLAAFTRIMHDNHFTHNDLKWRNLLVDNEGKLFFIDCPNG HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHEEEECCCCEEEEECCCC AFWWSFMLRYRITKDLACLDKVAKYHLSATQRLRFYLQYRQRTRLNASDKKRIRHIVSFF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH EGRE CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA