Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
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Accession | NC_007005 |
Length | 6,093,698 |
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The map label for this gene is ygjP [H]
Identifier: 66043777
GI number: 66043777
Start: 566818
End: 567342
Strand: Direct
Name: ygjP [H]
Synonym: Psyr_0510
Alternate gene names: 66043777
Gene position: 566818-567342 (Clockwise)
Preceding gene: 66043776
Following gene: 66043778
Centisome position: 9.3
GC content: 59.62
Gene sequence:
>525_bases ATGACTGCATCCAGCCCTGCTCCGCTCAAATACCTGCAGGCCTATCCGCAGGCCCTGCAGGATCAGGTGCAGCAGCTGAT TGCCGAGGATCGTCTGGCGGATTACCTTGAGCAGCGCTACCCCGCGCGGCATCAGGTCCAGAGCGACAAGGCCCTTTACG CCTATGCGCTGGCGCTCAAGCAGGATCACCTGCGCAACGCGCCAGCCATCAAGAAGGTTCTTTTCGACAATCGTCTCGAC CTGACCCACCGCGCGCTGGGCCTGCACACCAAGATATCCAGAGTGCAGGGCGGCAAGCTCAAGGCCAGTAACGAGATCCG TGTGGCCGCGCTGTTCAAGGAAGCGCCGCCAGAGTTTCTGAAAATGATCGTCGTGCACGAGCTGGCTCACTTTCGTGAGT CGGATCACAACAAGGCCTTCTACCAGTTGTGCGAGCACATGTTGCCCGGTTATCACCAATTGGAGTTCGATTTGCGCGTG TACCTGACGTACCGCGATCTGCAGGCCGCGCGAGCGCCATGCTGA
Upstream 100 bases:
>100_bases CGGAAGATGCGTTGCGCTTTCCCGGGCACTTTGATGTGGCGGGCTTCAGGCAAACCAGATTGTTGTAGAATGGCGTTTTT CGATCTCATGCAAAGGCCCC
Downstream 100 bases:
>100_bases GCCAGGCACTGAAAAAGGATTCGACGATGCAGGTCAGCAAGACCAAAAGCAGTTTCTATCGCCGCCTGTACGTGGCGTAT CTGATCGATTCACAGATCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 174; Mature: 173
Protein sequence:
>174_residues MTASSPAPLKYLQAYPQALQDQVQQLIAEDRLADYLEQRYPARHQVQSDKALYAYALALKQDHLRNAPAIKKVLFDNRLD LTHRALGLHTKISRVQGGKLKASNEIRVAALFKEAPPEFLKMIVVHELAHFRESDHNKAFYQLCEHMLPGYHQLEFDLRV YLTYRDLQAARAPC
Sequences:
>Translated_174_residues MTASSPAPLKYLQAYPQALQDQVQQLIAEDRLADYLEQRYPARHQVQSDKALYAYALALKQDHLRNAPAIKKVLFDNRLD LTHRALGLHTKISRVQGGKLKASNEIRVAALFKEAPPEFLKMIVVHELAHFRESDHNKAFYQLCEHMLPGYHQLEFDLRV YLTYRDLQAARAPC >Mature_173_residues TASSPAPLKYLQAYPQALQDQVQQLIAEDRLADYLEQRYPARHQVQSDKALYAYALALKQDHLRNAPAIKKVLFDNRLDL THRALGLHTKISRVQGGKLKASNEIRVAALFKEAPPEFLKMIVVHELAHFRESDHNKAFYQLCEHMLPGYHQLEFDLRVY LTYRDLQAARAPC
Specific function: Unknown
COG id: COG1451
COG function: function code R; Predicted metal-dependent hydrolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082207, Length=157, Percent_Identity=60.5095541401274, Blast_Score=199, Evalue=9e-53,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002725 [H]
Pfam domain/function: PF01863 DUF45 [H]
EC number: NA
Molecular weight: Translated: 20066; Mature: 19935
Theoretical pI: Translated: 9.24; Mature: 9.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTASSPAPLKYLQAYPQALQDQVQQLIAEDRLADYLEQRYPARHQVQSDKALYAYALALK CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHH QDHLRNAPAIKKVLFDNRLDLTHRALGLHTKISRVQGGKLKASNEIRVAALFKEAPPEFL HHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCHHHH KMIVVHELAHFRESDHNKAFYQLCEHMLPGYHQLEFDLRVYLTYRDLQAARAPC HHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEEEEEEEEEEEHHHHHHCCCC >Mature Secondary Structure TASSPAPLKYLQAYPQALQDQVQQLIAEDRLADYLEQRYPARHQVQSDKALYAYALALK CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHH QDHLRNAPAIKKVLFDNRLDLTHRALGLHTKISRVQGGKLKASNEIRVAALFKEAPPEFL HHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCHHHH KMIVVHELAHFRESDHNKAFYQLCEHMLPGYHQLEFDLRVYLTYRDLQAARAPC HHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEEEEEEEEEEEHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]