Definition Pseudomonas syringae pv. syringae B728a, complete genome.
Accession NC_007005
Length 6,093,698

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The map label for this gene is ygjP [H]

Identifier: 66043777

GI number: 66043777

Start: 566818

End: 567342

Strand: Direct

Name: ygjP [H]

Synonym: Psyr_0510

Alternate gene names: 66043777

Gene position: 566818-567342 (Clockwise)

Preceding gene: 66043776

Following gene: 66043778

Centisome position: 9.3

GC content: 59.62

Gene sequence:

>525_bases
ATGACTGCATCCAGCCCTGCTCCGCTCAAATACCTGCAGGCCTATCCGCAGGCCCTGCAGGATCAGGTGCAGCAGCTGAT
TGCCGAGGATCGTCTGGCGGATTACCTTGAGCAGCGCTACCCCGCGCGGCATCAGGTCCAGAGCGACAAGGCCCTTTACG
CCTATGCGCTGGCGCTCAAGCAGGATCACCTGCGCAACGCGCCAGCCATCAAGAAGGTTCTTTTCGACAATCGTCTCGAC
CTGACCCACCGCGCGCTGGGCCTGCACACCAAGATATCCAGAGTGCAGGGCGGCAAGCTCAAGGCCAGTAACGAGATCCG
TGTGGCCGCGCTGTTCAAGGAAGCGCCGCCAGAGTTTCTGAAAATGATCGTCGTGCACGAGCTGGCTCACTTTCGTGAGT
CGGATCACAACAAGGCCTTCTACCAGTTGTGCGAGCACATGTTGCCCGGTTATCACCAATTGGAGTTCGATTTGCGCGTG
TACCTGACGTACCGCGATCTGCAGGCCGCGCGAGCGCCATGCTGA

Upstream 100 bases:

>100_bases
CGGAAGATGCGTTGCGCTTTCCCGGGCACTTTGATGTGGCGGGCTTCAGGCAAACCAGATTGTTGTAGAATGGCGTTTTT
CGATCTCATGCAAAGGCCCC

Downstream 100 bases:

>100_bases
GCCAGGCACTGAAAAAGGATTCGACGATGCAGGTCAGCAAGACCAAAAGCAGTTTCTATCGCCGCCTGTACGTGGCGTAT
CTGATCGATTCACAGATCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 174; Mature: 173

Protein sequence:

>174_residues
MTASSPAPLKYLQAYPQALQDQVQQLIAEDRLADYLEQRYPARHQVQSDKALYAYALALKQDHLRNAPAIKKVLFDNRLD
LTHRALGLHTKISRVQGGKLKASNEIRVAALFKEAPPEFLKMIVVHELAHFRESDHNKAFYQLCEHMLPGYHQLEFDLRV
YLTYRDLQAARAPC

Sequences:

>Translated_174_residues
MTASSPAPLKYLQAYPQALQDQVQQLIAEDRLADYLEQRYPARHQVQSDKALYAYALALKQDHLRNAPAIKKVLFDNRLD
LTHRALGLHTKISRVQGGKLKASNEIRVAALFKEAPPEFLKMIVVHELAHFRESDHNKAFYQLCEHMLPGYHQLEFDLRV
YLTYRDLQAARAPC
>Mature_173_residues
TASSPAPLKYLQAYPQALQDQVQQLIAEDRLADYLEQRYPARHQVQSDKALYAYALALKQDHLRNAPAIKKVLFDNRLDL
THRALGLHTKISRVQGGKLKASNEIRVAALFKEAPPEFLKMIVVHELAHFRESDHNKAFYQLCEHMLPGYHQLEFDLRVY
LTYRDLQAARAPC

Specific function: Unknown

COG id: COG1451

COG function: function code R; Predicted metal-dependent hydrolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082207, Length=157, Percent_Identity=60.5095541401274, Blast_Score=199, Evalue=9e-53,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002725 [H]

Pfam domain/function: PF01863 DUF45 [H]

EC number: NA

Molecular weight: Translated: 20066; Mature: 19935

Theoretical pI: Translated: 9.24; Mature: 9.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTASSPAPLKYLQAYPQALQDQVQQLIAEDRLADYLEQRYPARHQVQSDKALYAYALALK
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHH
QDHLRNAPAIKKVLFDNRLDLTHRALGLHTKISRVQGGKLKASNEIRVAALFKEAPPEFL
HHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCHHHH
KMIVVHELAHFRESDHNKAFYQLCEHMLPGYHQLEFDLRVYLTYRDLQAARAPC
HHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEEEEEEEEEEEHHHHHHCCCC
>Mature Secondary Structure 
TASSPAPLKYLQAYPQALQDQVQQLIAEDRLADYLEQRYPARHQVQSDKALYAYALALK
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHH
QDHLRNAPAIKKVLFDNRLDLTHRALGLHTKISRVQGGKLKASNEIRVAALFKEAPPEFL
HHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCHHHH
KMIVVHELAHFRESDHNKAFYQLCEHMLPGYHQLEFDLRVYLTYRDLQAARAPC
HHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEEEEEEEEEEEHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]