Click here to switch to the map view.

The map label for this gene is 66043765

Identifier: 66043765

GI number: 66043765

Start: 540090

End: 540884

Strand: Direct

Name: 66043765

Synonym: Psyr_0498

Alternate gene names: NA

Gene position: 540090-540884 (Clockwise)

Preceding gene: 66043764

Following gene: 66043766

Centisome position: 8.86

GC content: 65.28

Gene sequence:

>795_bases
ATGAACTCACTGCAACTCGCCCGCGAGGCAGCCAGCGCCGCCCGTACCCGTTATCGCCAGGGATTCGTCGCGCCGACCGC
TGGCGAGGCGCCTGGTCTGACCCAGTGCAACATGATCACGCTGCCACGTGAATGGGCGTATGACTTTCTGCTGTTCGCAC
AGCGCAACCCGCAAGCCTGCCCGGTGCTGGATGTGACCGAGCCCGGCAGCCACACCACCCTGTTGGCCGAGCAGGCTGAT
CTGCGCACCGACCTGCCGCTGTACCGGGTCTGGCGCGACGGGCAACTGGCCGAAGAACTGAGTGATGTGAGCCACATCTG
GGCGCAGCACACCGATCTGGTCAGCTTTCTGATCGGCTGCAGCTTCACCTTCGAAACCGACCTGATGCACGCCGGCATCG
ATGTGCGCCACATCAGCGAAGGCTGCAATGTGCCGATGTACCGCAGCAACCGGGTCTGCCGCCCGGCCGGGCGCCTGCAG
GGCAACATGGTGGTGTCGATGCGCCCGATCGCGGCGGACCGGGTTGCCGAAGCAGCGCGGATCACCGGGCGCTATCCCGG
TGTGCACGGCGCGCCGGTGCATGTCGGCGAGCCTGAACTGCTCGGCATCAACGACCTGGCGAACCCTGATTTTGGTGATG
CGGTGACGATCAGGCCCGGCGAGATTCCGGTGTTCTGGGCCTGCGGCGTGACCCCGCAGGCGGTGGTCATGGCGTCCCGT
GTGCCGTTTGCGATTTCCCACGCGCCGGGCCACATGTTCATTACCGATATCCCGGACAGCTACTACCACGTATAG

Upstream 100 bases:

>100_bases
TGCATGGCGACAGCCCGGGCGCGGTGAACATCGCCCGCATCCTGAAAAACCGTTTGCACGATGCAGGCGTCACTGTCCGC
GCATTCAATCGAGGCTGATC

Downstream 100 bases:

>100_bases
GAGAGGTTCATGCGTTTCTACCCGGCCAACCTGGATGCACTCCTGGTTGAACTGTCGAATCTGGACGAGACCCTGGCCCT
GTTCGAATCGTTACAGCAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 264; Mature: 264

Protein sequence:

>264_residues
MNSLQLAREAASAARTRYRQGFVAPTAGEAPGLTQCNMITLPREWAYDFLLFAQRNPQACPVLDVTEPGSHTTLLAEQAD
LRTDLPLYRVWRDGQLAEELSDVSHIWAQHTDLVSFLIGCSFTFETDLMHAGIDVRHISEGCNVPMYRSNRVCRPAGRLQ
GNMVVSMRPIAADRVAEAARITGRYPGVHGAPVHVGEPELLGINDLANPDFGDAVTIRPGEIPVFWACGVTPQAVVMASR
VPFAISHAPGHMFITDIPDSYYHV

Sequences:

>Translated_264_residues
MNSLQLAREAASAARTRYRQGFVAPTAGEAPGLTQCNMITLPREWAYDFLLFAQRNPQACPVLDVTEPGSHTTLLAEQAD
LRTDLPLYRVWRDGQLAEELSDVSHIWAQHTDLVSFLIGCSFTFETDLMHAGIDVRHISEGCNVPMYRSNRVCRPAGRLQ
GNMVVSMRPIAADRVAEAARITGRYPGVHGAPVHVGEPELLGINDLANPDFGDAVTIRPGEIPVFWACGVTPQAVVMASR
VPFAISHAPGHMFITDIPDSYYHV
>Mature_264_residues
MNSLQLAREAASAARTRYRQGFVAPTAGEAPGLTQCNMITLPREWAYDFLLFAQRNPQACPVLDVTEPGSHTTLLAEQAD
LRTDLPLYRVWRDGQLAEELSDVSHIWAQHTDLVSFLIGCSFTFETDLMHAGIDVRHISEGCNVPMYRSNRVCRPAGRLQ
GNMVVSMRPIAADRVAEAARITGRYPGVHGAPVHVGEPELLGINDLANPDFGDAVTIRPGEIPVFWACGVTPQAVVMASR
VPFAISHAPGHMFITDIPDSYYHV

Specific function: Unknown

COG id: COG4336

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0317 family

Homologues:

Organism=Homo sapiens, GI156139135, Length=263, Percent_Identity=31.5589353612167, Blast_Score=128, Evalue=6e-30,
Organism=Homo sapiens, GI156139133, Length=265, Percent_Identity=32.0754716981132, Blast_Score=124, Evalue=8e-29,
Organism=Homo sapiens, GI156139131, Length=265, Percent_Identity=32.0754716981132, Blast_Score=124, Evalue=8e-29,
Organism=Homo sapiens, GI156139129, Length=265, Percent_Identity=32.0754716981132, Blast_Score=124, Evalue=8e-29,
Organism=Homo sapiens, GI156139137, Length=265, Percent_Identity=30.188679245283, Blast_Score=101, Evalue=9e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y498_PSEU2 (Q4ZZ54)

Other databases:

- EMBL:   CP000075
- RefSeq:   YP_233606.1
- ProteinModelPortal:   Q4ZZ54
- SMR:   Q4ZZ54
- STRING:   Q4ZZ54
- GeneID:   3365974
- GenomeReviews:   CP000075_GR
- KEGG:   psb:Psyr_0498
- NMPDR:   fig|205918.4.peg.831
- eggNOG:   COG4336
- HOGENOM:   HBG289473
- OMA:   GPMVVSM
- ProtClustDB:   PRK05463
- BioCyc:   PSYR205918:PSYR_0498-MONOMER
- HAMAP:   MF_01830
- InterPro:   IPR009906
- InterPro:   IPR016938
- PIRSF:   PIRSF029755

Pfam domain/function: PF07286 DUF1445

EC number: NA

Molecular weight: Translated: 28975; Mature: 28975

Theoretical pI: Translated: 5.97; Mature: 5.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSLQLAREAASAARTRYRQGFVAPTAGEAPGLTQCNMITLPREWAYDFLLFAQRNPQAC
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCHHHHCEEEEEECCCCCCC
PVLDVTEPGSHTTLLAEQADLRTDLPLYRVWRDGQLAEELSDVSHIWAQHTDLVSFLIGC
CEEECCCCCCCEEEEEECCCCCCCCCHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHC
SFTFETDLMHAGIDVRHISEGCNVPMYRSNRVCRPAGRLQGNMVVSMRPIAADRVAEAAR
CCEEECCHHHCCCCCEEHHCCCCCCEECCCCCCCCHHCCCCCEEEEECCCHHHHHHHHHH
ITGRYPGVHGAPVHVGEPELLGINDLANPDFGDAVTIRPGEIPVFWACGVTPQAVVMASR
HHCCCCCCCCCCEECCCCCEEECCCCCCCCCCCEEEEECCCCCEEEECCCCHHHHEECCC
VPFAISHAPGHMFITDIPDSYYHV
CCEEEECCCCEEEEEECCCHHCCC
>Mature Secondary Structure
MNSLQLAREAASAARTRYRQGFVAPTAGEAPGLTQCNMITLPREWAYDFLLFAQRNPQAC
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCHHHHCEEEEEECCCCCCC
PVLDVTEPGSHTTLLAEQADLRTDLPLYRVWRDGQLAEELSDVSHIWAQHTDLVSFLIGC
CEEECCCCCCCEEEEEECCCCCCCCCHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHC
SFTFETDLMHAGIDVRHISEGCNVPMYRSNRVCRPAGRLQGNMVVSMRPIAADRVAEAAR
CCEEECCHHHCCCCCEEHHCCCCCCEECCCCCCCCHHCCCCCEEEEECCCHHHHHHHHHH
ITGRYPGVHGAPVHVGEPELLGINDLANPDFGDAVTIRPGEIPVFWACGVTPQAVVMASR
HHCCCCCCCCCCEECCCCCEEECCCCCCCCCCCEEEEECCCCCEEEECCCCHHHHEECCC
VPFAISHAPGHMFITDIPDSYYHV
CCEEEECCCCEEEEEECCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA