Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
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Accession | NC_007005 |
Length | 6,093,698 |
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The map label for this gene is 66043716
Identifier: 66043716
GI number: 66043716
Start: 485743
End: 486159
Strand: Direct
Name: 66043716
Synonym: Psyr_0449
Alternate gene names: NA
Gene position: 485743-486159 (Clockwise)
Preceding gene: 66043715
Following gene: 66043717
Centisome position: 7.97
GC content: 62.11
Gene sequence:
>417_bases ATGATTATCTACGGTGTTGCACTACTGGCCATCTGCACGCTTGCGGGCGTGATTCTCGGCGACATGCTCGGCGTTCTGCT GGGCGTGAAATCCAATGTGGGCGGGGTCGGGATCGCCATGATCCTGTTGATCTGCGCGCGCCTGTGGATGGAAAAACACG GCGGCATGAGCAAGGACTGCGAAATGGGCGTGGGTTTCTGGGGCGCGCTGTACATCCCGGTGGTGGTGGCGATGGCTGCG CAACAGAATGTCGTCACCGCGCTCAAAGGCGGGCCTGTTGCCGTTCTGGCCGCCGTCGGTTCGGTGGTGTTGTGTGCCTG CACCATTGCTTTGATCAGCCGTACCAACCGGGGCGAGCCATTGCCCAAGGAAGAGCCGCTGCTGACGCCTGAAATCGCCC CGGCCGGAGGTCGCTGA
Upstream 100 bases:
>100_bases GTCGCGCGAGGAGGGTCGCCGCACCCCATAGAGCCGCCGTGCAGCTGCTACGAAGGACAAAAACAACAACTTCAGCAATG CAAACAGAGGAATAACAACA
Downstream 100 bases:
>100_bases TATGTGGGACCTCATCGAAAAGGGACTTGAACACAACGGCCTGATCACCGCCTTCGCCTTCGTCGGCATCATCATGTGGG TCTCGGTAGTGCTTTCCAGG
Product: malonate transporter MadL subunit
Products: NA
Alternate protein names: Malonate Transporter Subunit MadL; Malonate Transporter; Malonate Carrier Protein; Malonate Transporter L Subunit; Malonate/Sodium Symporter MadL Subunit; MalonateSodium Symporter Subunit MadL; Malonate Transporter Subunit
Number of amino acids: Translated: 138; Mature: 138
Protein sequence:
>138_residues MIIYGVALLAICTLAGVILGDMLGVLLGVKSNVGGVGIAMILLICARLWMEKHGGMSKDCEMGVGFWGALYIPVVVAMAA QQNVVTALKGGPVAVLAAVGSVVLCACTIALISRTNRGEPLPKEEPLLTPEIAPAGGR
Sequences:
>Translated_138_residues MIIYGVALLAICTLAGVILGDMLGVLLGVKSNVGGVGIAMILLICARLWMEKHGGMSKDCEMGVGFWGALYIPVVVAMAA QQNVVTALKGGPVAVLAAVGSVVLCACTIALISRTNRGEPLPKEEPLLTPEIAPAGGR >Mature_138_residues MIIYGVALLAICTLAGVILGDMLGVLLGVKSNVGGVGIAMILLICARLWMEKHGGMSKDCEMGVGFWGALYIPVVVAMAA QQNVVTALKGGPVAVLAAVGSVVLCACTIALISRTNRGEPLPKEEPLLTPEIAPAGGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14097; Mature: 14097
Theoretical pI: Translated: 7.83; Mature: 7.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 8.7 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 8.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIIYGVALLAICTLAGVILGDMLGVLLGVKSNVGGVGIAMILLICARLWMEKHGGMSKDC CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCH EMGVGFWGALYIPVVVAMAAQQNVVTALKGGPVAVLAAVGSVVLCACTIALISRTNRGEP HCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC LPKEEPLLTPEIAPAGGR CCCCCCCCCCCCCCCCCC >Mature Secondary Structure MIIYGVALLAICTLAGVILGDMLGVLLGVKSNVGGVGIAMILLICARLWMEKHGGMSKDC CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCH EMGVGFWGALYIPVVVAMAAQQNVVTALKGGPVAVLAAVGSVVLCACTIALISRTNRGEP HCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC LPKEEPLLTPEIAPAGGR CCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA