Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
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Accession | NC_007005 |
Length | 6,093,698 |
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The map label for this gene is 66043713
Identifier: 66043713
GI number: 66043713
Start: 483306
End: 484106
Strand: Direct
Name: 66043713
Synonym: Psyr_0446
Alternate gene names: NA
Gene position: 483306-484106 (Clockwise)
Preceding gene: 66043712
Following gene: 66043714
Centisome position: 7.93
GC content: 64.17
Gene sequence:
>801_bases ATGAGTCATTCACAACGGGGTTTGAACTGGTTCAACGCCTTGAGCGCAGGTGCCCGTGAAGTCACTGGCCTGCCTGCCTC ACTCAAGGTGGCGGATGGCGTGCTGGGCGAGCAGCCGGTGCGTTTTCTGGCCGTGATTGCCGATACCGACAACTGCTTTC CCCGGGCACGTCAGGGCGAAGTCGGCCTGCTGGAAGGCTGGGGCCTGGCCAAAGCGGTGGACGAGGCTATCGAGCAGGAT CGCGACCGCGCCGAAAAGCGCGCACTGATTGCCATCGTCGACGTCCCGAGCCAGGCCTACGGGCGTCGCGAGGAAGCGCT CGGTATCCATCAGGCACTGGCCGGGGCTGTGGACAGTTATGCGCGAGCACGTCTGGCCGGGCATCCGGTGATCGGCCTGT TGGTCGGCAAAGCGATGTCCGGCGCATTTCTGGCCCACGGCTATCAGGCCAATCGATTGATCGCGCTGCGTGATCCCGGC GTGATGGTGCATGCGATGGGCAAGGCTTCGGCAGCCCGCGTAACCCTGCGCAGCGTCGAGGATCTGGAAAAGCTCGCCGC CAGCATTCCGCCGATGGCTTACGACATTGACAGCTACGCCAGCCTCGGTCTGTTGTGGGAAACCCTGACGGTCAAGCAGA TCGAACAGCCCGCTGCGGATGACCTGGTTCAGGTGCGCAACGTGCTGAGCAGTGCGATCAAGGACGTACAGGCCCGCGGC GTCGATCTGAGCAGCCGCCTGGGCGCGAGCAACCGTGCGGCGTCGGTCAATGTGCGCCAGTTGCTGCGGGCGCAATGGTG A
Upstream 100 bases:
>100_bases GCAGTCAGTACCCACTGTTCCTGCAACGTCTGGCCAGCCTCGACACTGAACCGCAAATCGATCCGCAAAGCGTGCGCACC CTCTATCAAGGAGCCCGGTC
Downstream 100 bases:
>100_bases TCAGCAACACGGGTGCAGTGCTGCCCCATGATTTGTTGTGGGGCATGCCGCTGACTGCGTTGCCGGACGATGCGCCCAAA TGGGCGGTCGAGGCCGTGCT
Product: malonate decarboxylase gamma subunit
Products: NA
Alternate protein names: Malonate Decarboxylase Subunit Gamma; Malonate Decarboxylase Beta Subunit; LOW QUALITY PROTEIN Malonate Decarboxylase Gamma Subunit; Malonate Decarboxylase Subunit Beta/Gamma; Malonate Decarboxylase Subunit MdcE; Beta Subunit Of Malonate Decarboxylase; Subunit Beta Of Malonate Decarboxylase
Number of amino acids: Translated: 266; Mature: 265
Protein sequence:
>266_residues MSHSQRGLNWFNALSAGAREVTGLPASLKVADGVLGEQPVRFLAVIADTDNCFPRARQGEVGLLEGWGLAKAVDEAIEQD RDRAEKRALIAIVDVPSQAYGRREEALGIHQALAGAVDSYARARLAGHPVIGLLVGKAMSGAFLAHGYQANRLIALRDPG VMVHAMGKASAARVTLRSVEDLEKLAASIPPMAYDIDSYASLGLLWETLTVKQIEQPAADDLVQVRNVLSSAIKDVQARG VDLSSRLGASNRAASVNVRQLLRAQW
Sequences:
>Translated_266_residues MSHSQRGLNWFNALSAGAREVTGLPASLKVADGVLGEQPVRFLAVIADTDNCFPRARQGEVGLLEGWGLAKAVDEAIEQD RDRAEKRALIAIVDVPSQAYGRREEALGIHQALAGAVDSYARARLAGHPVIGLLVGKAMSGAFLAHGYQANRLIALRDPG VMVHAMGKASAARVTLRSVEDLEKLAASIPPMAYDIDSYASLGLLWETLTVKQIEQPAADDLVQVRNVLSSAIKDVQARG VDLSSRLGASNRAASVNVRQLLRAQW >Mature_265_residues SHSQRGLNWFNALSAGAREVTGLPASLKVADGVLGEQPVRFLAVIADTDNCFPRARQGEVGLLEGWGLAKAVDEAIEQDR DRAEKRALIAIVDVPSQAYGRREEALGIHQALAGAVDSYARARLAGHPVIGLLVGKAMSGAFLAHGYQANRLIALRDPGV MVHAMGKASAARVTLRSVEDLEKLAASIPPMAYDIDSYASLGLLWETLTVKQIEQPAADDLVQVRNVLSSAIKDVQARGV DLSSRLGASNRAASVNVRQLLRAQW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28449; Mature: 28318
Theoretical pI: Translated: 8.46; Mature: 8.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHSQRGLNWFNALSAGAREVTGLPASLKVADGVLGEQPVRFLAVIADTDNCFPRARQGE CCCCCCCHHHHHHHHCCCHHHCCCCCHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCC VGLLEGWGLAKAVDEAIEQDRDRAEKRALIAIVDVPSQAYGRREEALGIHQALAGAVDSY EEEECCCCHHHHHHHHHHHHHHHHHHCEEEEEEECCCHHHCCHHHHHHHHHHHHHHHHHH ARARLAGHPVIGLLVGKAMSGAFLAHGYQANRLIALRDPGVMVHAMGKASAARVTLRSVE HHHHHCCCCHHHHHHHHHHCCHHHHCCCCCCEEEEEECCCEEEEECCCCHHHHHHHHHHH DLEKLAASIPPMAYDIDSYASLGLLWETLTVKQIEQPAADDLVQVRNVLSSAIKDVQARG HHHHHHHHCCCCEECHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCC VDLSSRLGASNRAASVNVRQLLRAQW CCHHHHCCCCCCCCHHHHHHHHHCCC >Mature Secondary Structure SHSQRGLNWFNALSAGAREVTGLPASLKVADGVLGEQPVRFLAVIADTDNCFPRARQGE CCCCCCHHHHHHHHCCCHHHCCCCCHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCC VGLLEGWGLAKAVDEAIEQDRDRAEKRALIAIVDVPSQAYGRREEALGIHQALAGAVDSY EEEECCCCHHHHHHHHHHHHHHHHHHCEEEEEEECCCHHHCCHHHHHHHHHHHHHHHHHH ARARLAGHPVIGLLVGKAMSGAFLAHGYQANRLIALRDPGVMVHAMGKASAARVTLRSVE HHHHHCCCCHHHHHHHHHHCCHHHHCCCCCCEEEEEECCCEEEEECCCCHHHHHHHHHHH DLEKLAASIPPMAYDIDSYASLGLLWETLTVKQIEQPAADDLVQVRNVLSSAIKDVQARG HHHHHHHHCCCCEECHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCC VDLSSRLGASNRAASVNVRQLLRAQW CCHHHHCCCCCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA