| Definition | Corynebacterium glutamicum ATCC 13032, complete genome. |
|---|---|
| Accession | NC_006958 |
| Length | 3,282,708 |
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The map label for this gene is lip
Identifier: 62390365
GI number: 62390365
Start: 1561901
End: 1563217
Strand: Reverse
Name: lip
Synonym: cg1676
Alternate gene names: NA
Gene position: 1563217-1561901 (Counterclockwise)
Preceding gene: 62390367
Following gene: 62390364
Centisome position: 47.62
GC content: 57.78
Gene sequence:
>1317_bases GTGGCCGATATGGGCTACACCAACCTCAACGACACACGGGTCTTGCGCGCCGGGTCATGTGATGCCTGGTGGCGCACGAT GTCTCCGCTAGTGCAGCAGGGAAGTGAGGCAGTCTTTCGGCGCATCATGGGTCTCTCGCGGCGTCCTGATCGGAAACCTG GCTTTGACGATGTCCCACATTTCGGCGCAGCTGTTCGAGTTCCCGGTCTAAAACACGGCACGTTGGTCAATGCTGCACCC TTGAAAGTTTTGGGCGCACGGGGCGAGCCCAACCCCGCGAGTTCGTACCGTTTTGAATACATCACCGGTGATTCCGCAGG TCGAGCCATCACTGCGACCGGCGCTGTCCTCTTTTCCACACGCCCCTGGACAACCGGCCCGCGTCCCGCGATCGCCATGG CTCCATCCACCCAAGGCGTCGCACAGCACTGCGATCCCTCCCACACCTGCGCCATCGGACTCAACGCATTCTATGACAAA CCCTTCGACGCAATCATTGCTTACGAACTCCCCGTCATCCTCTGGTTTCTAGCTCACGGACTTGACGTTGTGTTCATCGA TTACCCCCGCGACCCCGCAACCGGCGTCCAATACTATTGCGATTCCATCGCTGCAGCTAAATCGCTTCTCGACGCCGTCC TCGCCTCCAGACAACTCGGCCTTTCACCGGAAGCACCGCTTGGCCTGTGGGGATTCTCCCAAGGAGGCGGCGCCACTGGC TGGGCTGCACAATTGCAGGATTACGCACCTGATGTCCGCCCAAAGGCAGCGGTCGTGGGCGCTCCACCAGTGGATCTCTT CCGCGTCTTGGACACTGTCGACGGCGGATTGCTCACCGGAGTGATTGCCTACGCCATCGCGGGACTTGCAGTGAACTCTT CAGAGATGTTTGAGGAAATCATGTCGGTGTTAAATGAACGCGGAGTCAGTGATGTGCTGAAAAATATCACCAGCTGCGCG GGAGGTTCCTTGTTGGCCAGTGGCTACTCGTCTTCCCGCGGGTGGACACATCAGGGCACGCCGCTGGCAGACATTCTGGA CGATCTGCCACTTGTTGTCGCTGAGTTTGGGAAGCAAAAGCTGGGTCGTGTGGCGCCAGAAATCCCAGTGCTGTTGTGGG GCTCTAAAAATGATGATGTCATTCCCATTGATCCCATTAGGGAATTGCGTGATAGCTGGGCGGACAAGGGTACGCCATTG ACCTGGCATGAATCCCAAGCGCCGCGTGTGCCAGGACGCACAGGTCTCAACCATTTCGGGCCCTATTTTAGAAACCTGGA AAAGTACTCGGGATGGCTCATAGATCATCTTGTCTGA
Upstream 100 bases:
>100_bases GGAAAAGAAACCGTACCCACAGACACACCAGAATTAACAGAAACAGACTGAAAAACAACATCGCTCGACATGCGCGTAAT CCTAACCCGCGCACACTAAT
Downstream 100 bases:
>100_bases GTGCCGTTTTAAAGGCTCGGATTCTCTCGATGTCCACTGGTGTGGGGTGCGCGCTTTTAAGCCTGGAGAAGCGATTCTAG AGGGGGTCGAATTTTAGGTC
Product: hypothetical protein
Products: diacylglycerol; carboxylate
Alternate protein names: NA
Number of amino acids: Translated: 438; Mature: 437
Protein sequence:
>438_residues MADMGYTNLNDTRVLRAGSCDAWWRTMSPLVQQGSEAVFRRIMGLSRRPDRKPGFDDVPHFGAAVRVPGLKHGTLVNAAP LKVLGARGEPNPASSYRFEYITGDSAGRAITATGAVLFSTRPWTTGPRPAIAMAPSTQGVAQHCDPSHTCAIGLNAFYDK PFDAIIAYELPVILWFLAHGLDVVFIDYPRDPATGVQYYCDSIAAAKSLLDAVLASRQLGLSPEAPLGLWGFSQGGGATG WAAQLQDYAPDVRPKAAVVGAPPVDLFRVLDTVDGGLLTGVIAYAIAGLAVNSSEMFEEIMSVLNERGVSDVLKNITSCA GGSLLASGYSSSRGWTHQGTPLADILDDLPLVVAEFGKQKLGRVAPEIPVLLWGSKNDDVIPIDPIRELRDSWADKGTPL TWHESQAPRVPGRTGLNHFGPYFRNLEKYSGWLIDHLV
Sequences:
>Translated_438_residues MADMGYTNLNDTRVLRAGSCDAWWRTMSPLVQQGSEAVFRRIMGLSRRPDRKPGFDDVPHFGAAVRVPGLKHGTLVNAAP LKVLGARGEPNPASSYRFEYITGDSAGRAITATGAVLFSTRPWTTGPRPAIAMAPSTQGVAQHCDPSHTCAIGLNAFYDK PFDAIIAYELPVILWFLAHGLDVVFIDYPRDPATGVQYYCDSIAAAKSLLDAVLASRQLGLSPEAPLGLWGFSQGGGATG WAAQLQDYAPDVRPKAAVVGAPPVDLFRVLDTVDGGLLTGVIAYAIAGLAVNSSEMFEEIMSVLNERGVSDVLKNITSCA GGSLLASGYSSSRGWTHQGTPLADILDDLPLVVAEFGKQKLGRVAPEIPVLLWGSKNDDVIPIDPIRELRDSWADKGTPL TWHESQAPRVPGRTGLNHFGPYFRNLEKYSGWLIDHLV >Mature_437_residues ADMGYTNLNDTRVLRAGSCDAWWRTMSPLVQQGSEAVFRRIMGLSRRPDRKPGFDDVPHFGAAVRVPGLKHGTLVNAAPL KVLGARGEPNPASSYRFEYITGDSAGRAITATGAVLFSTRPWTTGPRPAIAMAPSTQGVAQHCDPSHTCAIGLNAFYDKP FDAIIAYELPVILWFLAHGLDVVFIDYPRDPATGVQYYCDSIAAAKSLLDAVLASRQLGLSPEAPLGLWGFSQGGGATGW AAQLQDYAPDVRPKAAVVGAPPVDLFRVLDTVDGGLLTGVIAYAIAGLAVNSSEMFEEIMSVLNERGVSDVLKNITSCAG GSLLASGYSSSRGWTHQGTPLADILDDLPLVVAEFGKQKLGRVAPEIPVLLWGSKNDDVIPIDPIRELRDSWADKGTPLT WHESQAPRVPGRTGLNHFGPYFRNLEKYSGWLIDHLV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AB hydrolase superfamily. Lipase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005152 [H]
Pfam domain/function: PF03583 LIP [H]
EC number: 3.1.1.3
Molecular weight: Translated: 47106; Mature: 46975
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADMGYTNLNDTRVLRAGSCDAWWRTMSPLVQQGSEAVFRRIMGLSRRPDRKPGFDDVPH CCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCC FGAAVRVPGLKHGTLVNAAPLKVLGARGEPNPASSYRFEYITGDSAGRAITATGAVLFST CCCEEECCCCCCCCEECCCCHHEEECCCCCCCCCCEEEEEEECCCCCCEEEECCEEEEEC RPWTTGPRPAIAMAPSTQGVAQHCDPSHTCAIGLNAFYDKPFDAIIAYELPVILWFLAHG CCCCCCCCCEEEECCCCCHHHHHCCCCCEEEEECHHHHCCCHHHHHHHHHHHHHHHHHCC LDVVFIDYPRDPATGVQYYCDSIAAAKSLLDAVLASRQLGLSPEAPLGLWGFSQGGGATG CEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCH WAAQLQDYAPDVRPKAAVVGAPPVDLFRVLDTVDGGLLTGVIAYAIAGLAVNSSEMFEEI HHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHH MSVLNERGVSDVLKNITSCAGGSLLASGYSSSRGWTHQGTPLADILDDLPLVVAEFGKQK HHHHHHCCHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH LGRVAPEIPVLLWGSKNDDVIPIDPIRELRDSWADKGTPLTWHESQAPRVPGRTGLNHFG HHHCCCCCCEEEECCCCCCEECCCHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCHHHH PYFRNLEKYSGWLIDHLV HHHHHHHHHCCHHHHHCC >Mature Secondary Structure ADMGYTNLNDTRVLRAGSCDAWWRTMSPLVQQGSEAVFRRIMGLSRRPDRKPGFDDVPH CCCCCCCCCCCEEEECCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCC FGAAVRVPGLKHGTLVNAAPLKVLGARGEPNPASSYRFEYITGDSAGRAITATGAVLFST CCCEEECCCCCCCCEECCCCHHEEECCCCCCCCCCEEEEEEECCCCCCEEEECCEEEEEC RPWTTGPRPAIAMAPSTQGVAQHCDPSHTCAIGLNAFYDKPFDAIIAYELPVILWFLAHG CCCCCCCCCEEEECCCCCHHHHHCCCCCEEEEECHHHHCCCHHHHHHHHHHHHHHHHHCC LDVVFIDYPRDPATGVQYYCDSIAAAKSLLDAVLASRQLGLSPEAPLGLWGFSQGGGATG CEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCH WAAQLQDYAPDVRPKAAVVGAPPVDLFRVLDTVDGGLLTGVIAYAIAGLAVNSSEMFEEI HHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHH MSVLNERGVSDVLKNITSCAGGSLLASGYSSSRGWTHQGTPLADILDDLPLVVAEFGKQK HHHHHHCCHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH LGRVAPEIPVLLWGSKNDDVIPIDPIRELRDSWADKGTPLTWHESQAPRVPGRTGLNHFG HHHCCCCCCEEEECCCCCCEECCCHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCHHHH PYFRNLEKYSGWLIDHLV HHHHHHHHHCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: triacylglycerol; H2O
Specific reaction: triacylglycerol + H2O = diacylglycerol + a carboxylate
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]