| Definition | Corynebacterium glutamicum ATCC 13032, complete genome. |
|---|---|
| Accession | NC_006958 |
| Length | 3,282,708 |
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The map label for this gene is tap [H]
Identifier: 62390066
GI number: 62390066
Start: 1238010
End: 1239593
Strand: Reverse
Name: tap [H]
Synonym: cg1332
Alternate gene names: 62390066
Gene position: 1239593-1238010 (Counterclockwise)
Preceding gene: 62390069
Following gene: 62390061
Centisome position: 37.76
GC content: 58.27
Gene sequence:
>1584_bases ATGCCCCGTTCGACAATAAAAAGGGTAGTAGCAGTTCTTGCCGCCTCGACTGCGCTTAGCCCCTTTTTGGTATCAATGCC CACTGCAGCAGCGCAAGAAAACATCCGCTGGGAAGAATGCCCACCTCAGGTAGATATTGCCTCCGCTCAATGTGGCAGCA TCGACGTGCCCATGCACTATTCTGATCCCTCACTTGGCGATATCAGCGTGGGCTTTGTCAAGGTCCCTGCCCAAGGCGAA AAGCACGGCACCATCTTCGGTAACTCCGGTGGCCCTGGTGGCGATGCCTATAGCTTCTTCGGCAGCCAATCCATGAACTG GCCAGAAGCCATGTACCAAAACTACGACCTCGTTGCAGTGCAGCCTCGCGGAATGGTCGGCTCCACACCGGTTAACTGCG ACAACATCGCACCAGGATACGATTTCCTCTCGCTGCTCACCCGCGAAGGCGCTTTCGTTAAAGAATCCTGCGAGATCGGC ACCCCCGGCTACACCTCCAGCCTGACCACCGACAACACCGCCAACGACTGGGAGCGCGTCCGCCAAGCACTTGGCGATGA CAAGATCTCCATCTTCGGACTGTCCTACGGAACCTACCTCGGATCGGTCTACGCCACCCGCTACCCACAGCACACCGACA AGGTTGTCCTCGATTCCGCAATGGCGCCCAGCCTGGCATGGAACGGCATCATGGCCTCCCAAGAACAGGGCTACAAAAAC TCCCTCAACGACTTCTTCACCTGGGTTGCAGAAAACAACGACACGTATGGCCTCGGCACTACCCCACTAGCCGTGTACCA AAACTGGTCAAACAAGATCGTCGCCGAAACCGGAACCAACCCAACCGTTGCTCCACCACCAGCACAAGTTGGCGATGTCC CACCAGCATTCGCATGGGCCGGCCAAGCAGGCGCAGACATGATGACCGCCACCAACCCAACCTCCGTGCAACTCCAGGGC CTTGCCACCCAGCTCCTAAACCCTGGATCCAACCAGTCACTGAGCCCTCTGCTCAACGTCACCCGCGCCTACATCCCACA GCCATCAACCTGGCCCATGCTCGCAGGCGCCATCTCAGGGCAAACACCCATCCCTGACGTAACTGACACCGGCGACGACC CATACGTCATCGAAAGCATCAACGCCAGCGTCAACATGCAGCGCATGGTCATGTGCAACGAAAACACCGTCGCACCAGAC CCAGTAGCAATGGCACGCATGGCCTGGACAAGCATGGTCACCGGCGACGTCTTTGACATTTACTCCGTTAAATTCAGCTC CGGACAAGCCTGCTCCGGCATCACCCCAACAAGCGGCCGCCAGCCAACCGACGGATCTCAACTAGCAGTCCAACCACTAC TCCTCCAGGGAACCAGCGACCCACAAACCCCATACTGGACCCACAACGAGCTTGCCGACGCCATGAACGCCCACGTGGTC ACCGTCAACGGACCAGGACACGGCCAATCCATCGGCGGCACCAACCAAGCAATCAACGACATTGTTGTGGACTACCTCCG CACCGGACACACCGACGCCACCTGGGTCGAAGGCAACACACCCACCCCAATTACGGCTGGCTAA
Upstream 100 bases:
>100_bases TACTTATAACAAATCCCTGCCTTTTTAATGAAAAATCATTGGTCTCTGTATATGCTTTTTGGGGTAACTGACCCAGAAAA CAAACGTCCTTGGAGCCGTA
Downstream 100 bases:
>100_bases TTGCTTTCCACTTAGTAGATGGTGATAGAATCACACCGTTGTCATCACCCACTAAAGGAGATGGTGACGGTTCGCCTCCG TAGCTCAGTGGATAGAGCAC
Product: hydrolase
Products: NA
Alternate protein names: Tap [H]
Number of amino acids: Translated: 527; Mature: 526
Protein sequence:
>527_residues MPRSTIKRVVAVLAASTALSPFLVSMPTAAAQENIRWEECPPQVDIASAQCGSIDVPMHYSDPSLGDISVGFVKVPAQGE KHGTIFGNSGGPGGDAYSFFGSQSMNWPEAMYQNYDLVAVQPRGMVGSTPVNCDNIAPGYDFLSLLTREGAFVKESCEIG TPGYTSSLTTDNTANDWERVRQALGDDKISIFGLSYGTYLGSVYATRYPQHTDKVVLDSAMAPSLAWNGIMASQEQGYKN SLNDFFTWVAENNDTYGLGTTPLAVYQNWSNKIVAETGTNPTVAPPPAQVGDVPPAFAWAGQAGADMMTATNPTSVQLQG LATQLLNPGSNQSLSPLLNVTRAYIPQPSTWPMLAGAISGQTPIPDVTDTGDDPYVIESINASVNMQRMVMCNENTVAPD PVAMARMAWTSMVTGDVFDIYSVKFSSGQACSGITPTSGRQPTDGSQLAVQPLLLQGTSDPQTPYWTHNELADAMNAHVV TVNGPGHGQSIGGTNQAINDIVVDYLRTGHTDATWVEGNTPTPITAG
Sequences:
>Translated_527_residues MPRSTIKRVVAVLAASTALSPFLVSMPTAAAQENIRWEECPPQVDIASAQCGSIDVPMHYSDPSLGDISVGFVKVPAQGE KHGTIFGNSGGPGGDAYSFFGSQSMNWPEAMYQNYDLVAVQPRGMVGSTPVNCDNIAPGYDFLSLLTREGAFVKESCEIG TPGYTSSLTTDNTANDWERVRQALGDDKISIFGLSYGTYLGSVYATRYPQHTDKVVLDSAMAPSLAWNGIMASQEQGYKN SLNDFFTWVAENNDTYGLGTTPLAVYQNWSNKIVAETGTNPTVAPPPAQVGDVPPAFAWAGQAGADMMTATNPTSVQLQG LATQLLNPGSNQSLSPLLNVTRAYIPQPSTWPMLAGAISGQTPIPDVTDTGDDPYVIESINASVNMQRMVMCNENTVAPD PVAMARMAWTSMVTGDVFDIYSVKFSSGQACSGITPTSGRQPTDGSQLAVQPLLLQGTSDPQTPYWTHNELADAMNAHVV TVNGPGHGQSIGGTNQAINDIVVDYLRTGHTDATWVEGNTPTPITAG >Mature_526_residues PRSTIKRVVAVLAASTALSPFLVSMPTAAAQENIRWEECPPQVDIASAQCGSIDVPMHYSDPSLGDISVGFVKVPAQGEK HGTIFGNSGGPGGDAYSFFGSQSMNWPEAMYQNYDLVAVQPRGMVGSTPVNCDNIAPGYDFLSLLTREGAFVKESCEIGT PGYTSSLTTDNTANDWERVRQALGDDKISIFGLSYGTYLGSVYATRYPQHTDKVVLDSAMAPSLAWNGIMASQEQGYKNS LNDFFTWVAENNDTYGLGTTPLAVYQNWSNKIVAETGTNPTVAPPPAQVGDVPPAFAWAGQAGADMMTATNPTSVQLQGL ATQLLNPGSNQSLSPLLNVTRAYIPQPSTWPMLAGAISGQTPIPDVTDTGDDPYVIESINASVNMQRMVMCNENTVAPDP VAMARMAWTSMVTGDVFDIYSVKFSSGQACSGITPTSGRQPTDGSQLAVQPLLLQGTSDPQTPYWTHNELADAMNAHVVT VNGPGHGQSIGGTNQAINDIVVDYLRTGHTDATWVEGNTPTPITAG
Specific function: Cleaves tripeptides from the N-termini of proteins. Does not cleave mono- or dipeptides, or N-terminally blocked peptides [H]
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S33 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013595 [H]
Pfam domain/function: PF08386 Abhydrolase_4 [H]
EC number: NA
Molecular weight: Translated: 55956; Mature: 55825
Theoretical pI: Translated: 4.18; Mature: 4.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRSTIKRVVAVLAASTALSPFLVSMPTAAAQENIRWEECPPQVDIASAQCGSIDVPMHY CCHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHCCCHHCCCCCCEECCCCCCCEECCEEC SDPSLGDISVGFVKVPAQGEKHGTIFGNSGGPGGDAYSFFGSQSMNWPEAMYQNYDLVAV CCCCCCCEEEEEEECCCCCCCCCEEEECCCCCCCCHHHHCCCCCCCCHHHHHCCCCEEEE QPRGMVGSTPVNCDNIAPGYDFLSLLTREGAFVKESCEIGTPGYTSSLTTDNTANDWERV CCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCCHHHHHHH RQALGDDKISIFGLSYGTYLGSVYATRYPQHTDKVVLDSAMAPSLAWNGIMASQEQGYKN HHHHCCCCEEEEEEEHHHHHHHHHHHCCCCCCCCEEHHHHCCCCHHHCCEECCCCCCCHH SLNDFFTWVAENNDTYGLGTTPLAVYQNWSNKIVAETGTNPTVAPPPAQVGDVPPAFAWA HHHHHEEEEECCCCEECCCCCCHHEEECCCCEEEEECCCCCCCCCCCCCCCCCCCHHHCC GQAGADMMTATNPTSVQLQGLATQLLNPGSNQSLSPLLNVTRAYIPQPSTWPMLAGAISG CCCCCCCEECCCCCCEEEHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHCCC QTPIPDVTDTGDDPYVIESINASVNMQRMVMCNENTVAPDPVAMARMAWTSMVTGDVFDI CCCCCCCCCCCCCCEEEEECCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEE YSVKFSSGQACSGITPTSGRQPTDGSQLAVQPLLLQGTSDPQTPYWTHNELADAMNAHVV EEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCHHHHHHHHCCEEE TVNGPGHGQSIGGTNQAINDIVVDYLRTGHTDATWVEGNTPTPITAG EECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCC >Mature Secondary Structure PRSTIKRVVAVLAASTALSPFLVSMPTAAAQENIRWEECPPQVDIASAQCGSIDVPMHY CHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHCCCHHCCCCCCEECCCCCCCEECCEEC SDPSLGDISVGFVKVPAQGEKHGTIFGNSGGPGGDAYSFFGSQSMNWPEAMYQNYDLVAV CCCCCCCEEEEEEECCCCCCCCCEEEECCCCCCCCHHHHCCCCCCCCHHHHHCCCCEEEE QPRGMVGSTPVNCDNIAPGYDFLSLLTREGAFVKESCEIGTPGYTSSLTTDNTANDWERV CCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCCHHHHHHH RQALGDDKISIFGLSYGTYLGSVYATRYPQHTDKVVLDSAMAPSLAWNGIMASQEQGYKN HHHHCCCCEEEEEEEHHHHHHHHHHHCCCCCCCCEEHHHHCCCCHHHCCEECCCCCCCHH SLNDFFTWVAENNDTYGLGTTPLAVYQNWSNKIVAETGTNPTVAPPPAQVGDVPPAFAWA HHHHHEEEEECCCCEECCCCCCHHEEECCCCEEEEECCCCCCCCCCCCCCCCCCCHHHCC GQAGADMMTATNPTSVQLQGLATQLLNPGSNQSLSPLLNVTRAYIPQPSTWPMLAGAISG CCCCCCCEECCCCCCEEEHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHCCC QTPIPDVTDTGDDPYVIESINASVNMQRMVMCNENTVAPDPVAMARMAWTSMVTGDVFDI CCCCCCCCCCCCCCEEEEECCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEE YSVKFSSGQACSGITPTSGRQPTDGSQLAVQPLLLQGTSDPQTPYWTHNELADAMNAHVV EEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCHHHHHHHHCCEEE TVNGPGHGQSIGGTNQAINDIVVDYLRTGHTDATWVEGNTPTPITAG EECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12000953 [H]