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The map label for this gene is tnp9a(ISCg9a)

Identifier: 62389924

GI number: 62389924

Start: 1090001

End: 1091209

Strand: Reverse

Name: tnp9a(ISCg9a)

Synonym: cg1178

Alternate gene names: NA

Gene position: 1091209-1090001 (Counterclockwise)

Preceding gene: 62389930

Following gene: 62389923

Centisome position: 33.24

GC content: 58.56

Gene sequence:

>1209_bases
ATGGCCTATGACTTCGTCATTGGAATGGACGTCGGCAAATACTTCCACCACGCCTGCGTCCTCGATCCCCAGGGCAGACA
AGTCCTATCCAAACGCATCAACCAACACGAAGGCTCGCTACGCAAGCTCTTCGACAAATTCCTGGCCAATGACGCCGAGG
TCCTTGTCGTCGTCGATCAGCCCAACAACATCGGCAGGCTAACCGTCGCAGTCGCCCAAGCAATGGGAGCCGACGTTCGC
TACCTCCCCGGGCTTGCCATGCGACAACTTTCACGTATCCACGTCGGCAACTCCAAGACCGATGTACGGGACGCTTATGT
CATCGCCCATGCCGGCCTCAACCTTCCGGATGCCCTGCGTAGCGTCGACCGCGTTGAGGAAGTCTTCCTCCAGCTGAAAG
TCCTCAACGGTATCGACGAAGACCTCGCCCGCGCCTACACACGCCTGATCAACCAGATGCAATCCGCGCTCGTGGGCACC
TACCCCGCATTCGAACATGTCCTGCGTGGGCAGATGATTCACCGCAAGTGGATTCTCCACCTTCTGGCGAAATACGGTGG
CCCCACCAAGATTCGACGCGTCGGCAAAGCACGGCTGGCAGCTTTCGCACGTGGTCACAGGGCACGTAATCCTGAGCCAG
TTATCGATGCCATGCTTGCTGCGATCCACGGCCAGACGGTATCCATCGCCGGCGCAGAATACGCGGAACTTGGCGTAGCA
ATGTCCGCCAAAGATGCACTAGCCAAGCTGGAGCACCGCAAAGAGATTGAAGGCCAGGTACTCGAGCTGATCCAGGACAT
TCCTCAGACCGAGATTCTCTTGTCCATGCCCGGCATCGGCCCACGTAGCGCCGCGCAAATCCTTATGACCGTCGGCGATA
TGTCCGACTTTCCCGATGCAGCGCACCTGGCGTCCTATGCAGGCCTGTCGCCGCAGACAAATCAGTCGGGAACGTCGATC
ATGTCGAATTCGCCCAACCGGGCCGGCAACAAGAAATTGAAGAACGCCCTATGGCAGTCGTCTTTTGCATCGATCAGATT
CCACGAGCGTTCCCGGCAATTCTATGAACGAAAACGCAACGAAGGCAAAAGACACAACGCCGCAGTCGTCGCGCTCGCAC
GCCGACGCCTCAACGTCCTCTTCGCCATGATGCGCAGCGGAGAGCTCTACAGAGACATCCCCACAGCCCAGGAGGCCGCA
GCGGCCTAG

Upstream 100 bases:

>100_bases
TCTCACAGTAATGTGGATGCCAGCACAAGTATGTCCGACCACCCCAGCGATGAAGCGTAAATAATCCAACTCCCTACTCA
TCGCTAGGAGGCACAGACTC

Downstream 100 bases:

>100_bases
CCCCTACAAGCCCCGAAGCCGATTGTGCAGGAAGCCCAATCGGCTCTTCAGCATGCCCGAAAACAACATCCGCAGCGTGA
AGCAGAACCCCTTCACACCC

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 402; Mature: 401

Protein sequence:

>402_residues
MAYDFVIGMDVGKYFHHACVLDPQGRQVLSKRINQHEGSLRKLFDKFLANDAEVLVVVDQPNNIGRLTVAVAQAMGADVR
YLPGLAMRQLSRIHVGNSKTDVRDAYVIAHAGLNLPDALRSVDRVEEVFLQLKVLNGIDEDLARAYTRLINQMQSALVGT
YPAFEHVLRGQMIHRKWILHLLAKYGGPTKIRRVGKARLAAFARGHRARNPEPVIDAMLAAIHGQTVSIAGAEYAELGVA
MSAKDALAKLEHRKEIEGQVLELIQDIPQTEILLSMPGIGPRSAAQILMTVGDMSDFPDAAHLASYAGLSPQTNQSGTSI
MSNSPNRAGNKKLKNALWQSSFASIRFHERSRQFYERKRNEGKRHNAAVVALARRRLNVLFAMMRSGELYRDIPTAQEAA
AA

Sequences:

>Translated_402_residues
MAYDFVIGMDVGKYFHHACVLDPQGRQVLSKRINQHEGSLRKLFDKFLANDAEVLVVVDQPNNIGRLTVAVAQAMGADVR
YLPGLAMRQLSRIHVGNSKTDVRDAYVIAHAGLNLPDALRSVDRVEEVFLQLKVLNGIDEDLARAYTRLINQMQSALVGT
YPAFEHVLRGQMIHRKWILHLLAKYGGPTKIRRVGKARLAAFARGHRARNPEPVIDAMLAAIHGQTVSIAGAEYAELGVA
MSAKDALAKLEHRKEIEGQVLELIQDIPQTEILLSMPGIGPRSAAQILMTVGDMSDFPDAAHLASYAGLSPQTNQSGTSI
MSNSPNRAGNKKLKNALWQSSFASIRFHERSRQFYERKRNEGKRHNAAVVALARRRLNVLFAMMRSGELYRDIPTAQEAA
AA
>Mature_401_residues
AYDFVIGMDVGKYFHHACVLDPQGRQVLSKRINQHEGSLRKLFDKFLANDAEVLVVVDQPNNIGRLTVAVAQAMGADVRY
LPGLAMRQLSRIHVGNSKTDVRDAYVIAHAGLNLPDALRSVDRVEEVFLQLKVLNGIDEDLARAYTRLINQMQSALVGTY
PAFEHVLRGQMIHRKWILHLLAKYGGPTKIRRVGKARLAAFARGHRARNPEPVIDAMLAAIHGQTVSIAGAEYAELGVAM
SAKDALAKLEHRKEIEGQVLELIQDIPQTEILLSMPGIGPRSAAQILMTVGDMSDFPDAAHLASYAGLSPQTNQSGTSIM
SNSPNRAGNKKLKNALWQSSFASIRFHERSRQFYERKRNEGKRHNAAVVALARRRLNVLFAMMRSGELYRDIPTAQEAAA
A

Specific function: Unknown

COG id: COG3547

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003346
- InterPro:   IPR002525 [H]

Pfam domain/function: PF02371 Transposase_20; PF01548 Transposase_9 [H]

EC number: NA

Molecular weight: Translated: 44469; Mature: 44338

Theoretical pI: Translated: 10.28; Mature: 10.28

Prosite motif: PS00217 SUGAR_TRANSPORT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYDFVIGMDVGKYFHHACVLDPQGRQVLSKRINQHEGSLRKLFDKFLANDAEVLVVVDQ
CCEEEEEECHHHHHHHHHHEECCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEEEEC
PNNIGRLTVAVAQAMGADVRYLPGLAMRQLSRIHVGNSKTDVRDAYVIAHAGLNLPDALR
CCCCCHHHHHHHHHHCCCCHHCCCHHHHHHHHHHCCCCCCCHHHHEEEEECCCCCHHHHH
SVDRVEEVFLQLKVLNGIDEDLARAYTRLINQMQSALVGTYPAFEHVLRGQMIHRKWILH
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
LLAKYGGPTKIRRVGKARLAAFARGHRARNPEPVIDAMLAAIHGQTVSIAGAEYAELGVA
HHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCEEEECCCHHHHHCCH
MSAKDALAKLEHRKEIEGQVLELIQDIPQTEILLSMPGIGPRSAAQILMTVGDMSDFPDA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCH
AHLASYAGLSPQTNQSGTSIMSNSPNRAGNKKLKNALWQSSFASIRFHERSRQFYERKRN
HHHHHHCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
EGKRHNAAVVALARRRLNVLFAMMRSGELYRDIPTAQEAAAA
CCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHCCC
>Mature Secondary Structure 
AYDFVIGMDVGKYFHHACVLDPQGRQVLSKRINQHEGSLRKLFDKFLANDAEVLVVVDQ
CEEEEEECHHHHHHHHHHEECCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEEEEC
PNNIGRLTVAVAQAMGADVRYLPGLAMRQLSRIHVGNSKTDVRDAYVIAHAGLNLPDALR
CCCCCHHHHHHHHHHCCCCHHCCCHHHHHHHHHHCCCCCCCHHHHEEEEECCCCCHHHHH
SVDRVEEVFLQLKVLNGIDEDLARAYTRLINQMQSALVGTYPAFEHVLRGQMIHRKWILH
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
LLAKYGGPTKIRRVGKARLAAFARGHRARNPEPVIDAMLAAIHGQTVSIAGAEYAELGVA
HHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCEEEECCCHHHHHCCH
MSAKDALAKLEHRKEIEGQVLELIQDIPQTEILLSMPGIGPRSAAQILMTVGDMSDFPDA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCH
AHLASYAGLSPQTNQSGTSIMSNSPNRAGNKKLKNALWQSSFASIRFHERSRQFYERKRN
HHHHHHCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
EGKRHNAAVVALARRRLNVLFAMMRSGELYRDIPTAQEAAAA
CCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2821490; 12000953 [H]