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The map label for this gene is ydfG [C]

Identifier: 62389086

GI number: 62389086

Start: 209208

End: 209969

Strand: Reverse

Name: ydfG [C]

Synonym: cg0237

Alternate gene names: 62389086

Gene position: 209969-209208 (Counterclockwise)

Preceding gene: 62389087

Following gene: 62389085

Centisome position: 6.4

GC content: 57.09

Gene sequence:

>762_bases
ATGCTTAACGCAGTGGGCAAAGCCCAAAACATTCTCCTTCTTGGTGGAACCTCTGAGATCGGTATTTCCATTGTCTCCCG
CTTCCTCAAGCAGGGTCCATCCCATGTGACCTTGGCAGCGCGTAAAGATTCCCCACGCGTGGACGCAGCAGTCGCAGAGA
TCAAAGCAGCTGGCGCTGCTTCCGTTGCTGTTGTTGATTTCGATGCGCTCGACACCGAATCCCACCCTGCAGCCATCGAC
GCAGCCTTTGAAAACGGCGACGTTGACGTAGCAATCGTGGCTTTCGGCATCCTCGGCGACAACGAAGCACAGTGGCGCGA
CCAAGCACTAGCAGTGGAAGCAACCACCGTGAACTACACCGCCGGCGTTTCCGTAGGTGTACTGCTGGGCCAGAAATTTG
AGCAGCAGGGCCACGGCACCATCGTGGCATTGTCCTCTGTGGCAGGCCAGCGAGTCCGCCGCTCCAACTTTGTCTACGGC
TCCGCCAAGGCAGGTTTCGACGGTTTCTACACCCAGCTCGGCGAAGCCCTGCGTGGATCCGGTGCCAACGTATTGGTGGT
TCGCCCAGGCCAGGTACGCACCAAGATGTCCGCAGATGGTGGCGAAGCCCCACTGACCGTCAACCGCGAAGACGTGGCAG
ATGCTGTTTATGATGCAGTGGTGAACAAGAAGGACATCATCTTTGTCCACCCACTGTTCCAGTACGTCTCTTTTGCGTTC
CAATTCATTCCGCGAGCAATCTTCCGCAAGCTGCCGTTCTAA

Upstream 100 bases:

>100_bases
GCTGGTTGAAGACTCGAAATGAGATCGACCCAACCGGAGTCTTTGCATCTGACATGTCCCGCCGACTTGAGCTTTCTTAA
GAAAGGGCTTGAACTAAACA

Downstream 100 bases:

>100_bases
CGGAAGTTACGGAAGTTACGCGACCCGCCGTCCTCAAAATTTTTAAAGGATGGCGGGTTTTACATATGGCAAGCTCTGAA
AGCAGATAGCACGTGAGACT

Product: short chain dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 253; Mature: 253

Protein sequence:

>253_residues
MLNAVGKAQNILLLGGTSEIGISIVSRFLKQGPSHVTLAARKDSPRVDAAVAEIKAAGAASVAVVDFDALDTESHPAAID
AAFENGDVDVAIVAFGILGDNEAQWRDQALAVEATTVNYTAGVSVGVLLGQKFEQQGHGTIVALSSVAGQRVRRSNFVYG
SAKAGFDGFYTQLGEALRGSGANVLVVRPGQVRTKMSADGGEAPLTVNREDVADAVYDAVVNKKDIIFVHPLFQYVSFAF
QFIPRAIFRKLPF

Sequences:

>Translated_253_residues
MLNAVGKAQNILLLGGTSEIGISIVSRFLKQGPSHVTLAARKDSPRVDAAVAEIKAAGAASVAVVDFDALDTESHPAAID
AAFENGDVDVAIVAFGILGDNEAQWRDQALAVEATTVNYTAGVSVGVLLGQKFEQQGHGTIVALSSVAGQRVRRSNFVYG
SAKAGFDGFYTQLGEALRGSGANVLVVRPGQVRTKMSADGGEAPLTVNREDVADAVYDAVVNKKDIIFVHPLFQYVSFAF
QFIPRAIFRKLPF
>Mature_253_residues
MLNAVGKAQNILLLGGTSEIGISIVSRFLKQGPSHVTLAARKDSPRVDAAVAEIKAAGAASVAVVDFDALDTESHPAAID
AAFENGDVDVAIVAFGILGDNEAQWRDQALAVEATTVNYTAGVSVGVLLGQKFEQQGHGTIVALSSVAGQRVRRSNFVYG
SAKAGFDGFYTQLGEALRGSGANVLVVRPGQVRTKMSADGGEAPLTVNREDVADAVYDAVVNKKDIIFVHPLFQYVSFAF
QFIPRAIFRKLPF

Specific function: Involved in the epimerization of decaprenylphosphoryl ribose (DPR) to decaprenylphosphoryl arabinose (DPA) a precursor for arabinan synthesis in mycobacterial cell wall biosynthesis. Probably catalyzes the reduction of at C-2 of decaprenylphosphoryl 2-ket

COG id: COG1028

COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

None

Paralogues:

None

Copy number: 1300 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 26723; Mature: 26723

Theoretical pI: Translated: 6.13; Mature: 6.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNAVGKAQNILLLGGTSEIGISIVSRFLKQGPSHVTLAARKDSPRVDAAVAEIKAAGAA
CCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHCCCC
SVAVVDFDALDTESHPAAIDAAFENGDVDVAIVAFGILGDNEAQWRDQALAVEATTVNYT
EEEEEEECCCCCCCCCCEEEEEECCCCEEEEEEEEEEECCCCHHHCCCEEEEEEEEEEEE
AGVSVGVLLGQKFEQQGHGTIVALSSVAGQRVRRSNFVYGSAKAGFDGFYTQLGEALRGS
CCCHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHCC
GANVLVVRPGQVRTKMSADGGEAPLTVNREDVADAVYDAVVNKKDIIFVHPLFQYVSFAF
CCEEEEECCCCEEEEECCCCCCCCEEECHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHH
QFIPRAIFRKLPF
HHHHHHHHHHCCC
>Mature Secondary Structure
MLNAVGKAQNILLLGGTSEIGISIVSRFLKQGPSHVTLAARKDSPRVDAAVAEIKAAGAA
CCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHCCCC
SVAVVDFDALDTESHPAAIDAAFENGDVDVAIVAFGILGDNEAQWRDQALAVEATTVNYT
EEEEEEECCCCCCCCCCEEEEEECCCCEEEEEEEEEEECCCCHHHCCCEEEEEEEEEEEE
AGVSVGVLLGQKFEQQGHGTIVALSSVAGQRVRRSNFVYGSAKAGFDGFYTQLGEALRGS
CCCHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHCC
GANVLVVRPGQVRTKMSADGGEAPLTVNREDVADAVYDAVVNKKDIIFVHPLFQYVSFAF
CCEEEEECCCCEEEEECCCCCCCCEEECHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHH
QFIPRAIFRKLPF
HHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]