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The map label for this gene is yvaA [H]

Identifier: 62389061

GI number: 62389061

Start: 179690

End: 180715

Strand: Direct

Name: yvaA [H]

Synonym: cg0207

Alternate gene names: 62389061

Gene position: 179690-180715 (Clockwise)

Preceding gene: 62389060

Following gene: 62389062

Centisome position: 5.47

GC content: 57.12

Gene sequence:

>1026_bases
ATGACTATTCGAATCGGACTCGTTGGCTACGGTGTCGGCGGCAGGCTCTTTCACACCCCTTACATCCAAGCTTCTACGCA
CTGCGAATTAGTAGGCGTAGTTGCTCGTTCCGAAGGCACCAAAGCAGCCGTTGCAGAAGATCTTCCAGATGTTGCCATCG
TGGGATCGCTGACAGAACTCCTCGAACTGGGCGTCGATGCAGTGGTGATCTCCACCCCTCCAGCCACGCGCCGGGAACTG
GCCTTGGAAGCAATCAACGCAGGTGTCGCAGTGGTTGCCGATAAACCGTTTGCACCATCAGCCGCAGATGCCATGGAACT
TGTCGAAGCCGCCGAAAAGGCTGGAGTGCTGCTCAACGTCTTCCACAACAGGCGCAACGACACCCACATTGTCACGGCAC
TGGGAATCCAAGAAGAACTTGGTGCGATGCGTGGACTGGACCTGCGACTAGACCTGATCGAACCTGATTCCTTGGAGGCA
GGTCCTGAAGGTGGTTTGCTGCGCGATCTGGGCTCACACGTAGTCGATCAGACCCTGGTTCTCATGGGGCCGGCTACCTC
TGTCACCGCCCAACTTGGATCCATCGACCTTCCAGAAGGCCCAACCAACGCAAGGTTCCGCATCGTGTTGGAACATGAAT
CGGGCGCCGTATCGCACATTTCTGCCAGCAAGATTGACCGCTTGGAGTCCTGGGAAATCCGCTTGGTGGGCGAGCGCGGC
TCCTACGTATCCAACTACACCGACGTGCAGACCGTGGCGATCAAACAGGGACTTCGACCAACCAATGACCGCGAACACTG
GGGCTACGAATCGGAGGAGCGGTGGGGCACCTTGGTTACCGATGAAGGCTCAAAGGTGATTCCTTCAGCACAAGGCGATT
ACACCCGCTTCTACGATGCCTTTGCCTTGGCTGTGGAAAACGGTGGCGCAGGGCCGGTGCCTGCACGTGAAGGTGTTGCA
GTGCTCAAGGTGTTGGATGCTGTAGCCCAGAGCGCTGCGGAAAAACGCACCATTGAGTTGAGCTAA

Upstream 100 bases:

>100_bases
GTTCCTCATTCCTCTAATCGGCGCACTATCTTTGCCTCGCGACGGCGGTGCCCGAGCCTTTTCCTCCTCTTAGAAACCCA
CTTCTGAAAGGTATAAAAAC

Downstream 100 bases:

>100_bases
GGAGAAGTGCTGCTGGCTGCTAGCGGTAATTAGACGTCTGTCTCTAGGGATGCCGCATCCCGCCGGCGCTCCTAGAGTCC
GTTTGTAAAACCTAGAATTC

Product: oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 341; Mature: 340

Protein sequence:

>341_residues
MTIRIGLVGYGVGGRLFHTPYIQASTHCELVGVVARSEGTKAAVAEDLPDVAIVGSLTELLELGVDAVVISTPPATRREL
ALEAINAGVAVVADKPFAPSAADAMELVEAAEKAGVLLNVFHNRRNDTHIVTALGIQEELGAMRGLDLRLDLIEPDSLEA
GPEGGLLRDLGSHVVDQTLVLMGPATSVTAQLGSIDLPEGPTNARFRIVLEHESGAVSHISASKIDRLESWEIRLVGERG
SYVSNYTDVQTVAIKQGLRPTNDREHWGYESEERWGTLVTDEGSKVIPSAQGDYTRFYDAFALAVENGGAGPVPAREGVA
VLKVLDAVAQSAAEKRTIELS

Sequences:

>Translated_341_residues
MTIRIGLVGYGVGGRLFHTPYIQASTHCELVGVVARSEGTKAAVAEDLPDVAIVGSLTELLELGVDAVVISTPPATRREL
ALEAINAGVAVVADKPFAPSAADAMELVEAAEKAGVLLNVFHNRRNDTHIVTALGIQEELGAMRGLDLRLDLIEPDSLEA
GPEGGLLRDLGSHVVDQTLVLMGPATSVTAQLGSIDLPEGPTNARFRIVLEHESGAVSHISASKIDRLESWEIRLVGERG
SYVSNYTDVQTVAIKQGLRPTNDREHWGYESEERWGTLVTDEGSKVIPSAQGDYTRFYDAFALAVENGGAGPVPAREGVA
VLKVLDAVAQSAAEKRTIELS
>Mature_340_residues
TIRIGLVGYGVGGRLFHTPYIQASTHCELVGVVARSEGTKAAVAEDLPDVAIVGSLTELLELGVDAVVISTPPATRRELA
LEAINAGVAVVADKPFAPSAADAMELVEAAEKAGVLLNVFHNRRNDTHIVTALGIQEELGAMRGLDLRLDLIEPDSLEAG
PEGGLLRDLGSHVVDQTLVLMGPATSVTAQLGSIDLPEGPTNARFRIVLEHESGAVSHISASKIDRLESWEIRLVGERGS
YVSNYTDVQTVAIKQGLRPTNDREHWGYESEERWGTLVTDEGSKVIPSAQGDYTRFYDAFALAVENGGAGPVPAREGVAV
LKVLDAVAQSAAEKRTIELS

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Escherichia coli, GI87081947, Length=352, Percent_Identity=31.5340909090909, Blast_Score=145, Evalue=5e-36,
Organism=Escherichia coli, GI1789848, Length=336, Percent_Identity=25.297619047619, Blast_Score=103, Evalue=2e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 36230; Mature: 36099

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIRIGLVGYGVGGRLFHTPYIQASTHCELVGVVARSEGTKAAVAEDLPDVAIVGSLTEL
CEEEEEEEEECCCCEEEECCCCCCCCCEEEEEEEECCCCCCHHHHHCCCCEEHHHHHHHH
LELGVDAVVISTPPATRRELALEAINAGVAVVADKPFAPSAADAMELVEAAEKAGVLLNV
HHCCCCEEEEECCCCHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHCCEEEEE
FHNRRNDTHIVTALGIQEELGAMRGLDLRLDLIEPDSLEAGPEGGLLRDLGSHVVDQTLV
ECCCCCCCEEEEEECCHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHCEEE
LMGPATSVTAQLGSIDLPEGPTNARFRIVLEHESGAVSHISASKIDRLESWEIRLVGERG
EECCCHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCEECCHHHHHCCCCCEEEEEECCC
SYVSNYTDVQTVAIKQGLRPTNDREHWGYESEERWGTLVTDEGSKVIPSAQGDYTRFYDA
CCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCEECCCCCCCHHHHHEE
FALAVENGGAGPVPAREGVAVLKVLDAVAQSAAEKRTIELS
EEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCEEEECC
>Mature Secondary Structure 
TIRIGLVGYGVGGRLFHTPYIQASTHCELVGVVARSEGTKAAVAEDLPDVAIVGSLTEL
EEEEEEEEECCCCEEEECCCCCCCCCEEEEEEEECCCCCCHHHHHCCCCEEHHHHHHHH
LELGVDAVVISTPPATRRELALEAINAGVAVVADKPFAPSAADAMELVEAAEKAGVLLNV
HHCCCCEEEEECCCCHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHCCEEEEE
FHNRRNDTHIVTALGIQEELGAMRGLDLRLDLIEPDSLEAGPEGGLLRDLGSHVVDQTLV
ECCCCCCCEEEEEECCHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHCEEE
LMGPATSVTAQLGSIDLPEGPTNARFRIVLEHESGAVSHISASKIDRLESWEIRLVGERG
EECCCHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCEECCHHHHHCCCCCEEEEEECCC
SYVSNYTDVQTVAIKQGLRPTNDREHWGYESEERWGTLVTDEGSKVIPSAQGDYTRFYDA
CCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCEECCCCCCCHHHHHEE
FALAVENGGAGPVPAREGVAVLKVLDAVAQSAAEKRTIELS
EEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]