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The map label for this gene is abrB [H]

Identifier: 62389031

GI number: 62389031

Start: 149792

End: 150931

Strand: Reverse

Name: abrB [H]

Synonym: cg0174

Alternate gene names: 62389031

Gene position: 150931-149792 (Counterclockwise)

Preceding gene: 62389032

Following gene: 62389029

Centisome position: 4.6

GC content: 57.02

Gene sequence:

>1140_bases
TTGAGCGATAAAGAACCAGACCCCCACGAACAAATTCCAGAGAAGCCATCCCGCAAGGTTATTGCACTTCGTTGGTGCAT
CGTAGCGCCGCTGTCGCTAGCCGTGGGGTGGCTTTTTACTATGTGGGGTGTGCCAGCCGCATGGATCCTCGGGGCGATCC
TTGTTGCCGGTGTATGTGCGCTGACCACAGGGCAAGATCTTCCGATGGCCAAGGGGGTGCATGTTTTTGGTCGCTCAATC
GTGGCGATGCTGGCGGCGCTGCCTTTGATTAGTTCTTCTGGTTCGGAACTTGTTCGTTTCCTCATCCCGGGTCTTGTGAT
TTCCTTTTTCACCATCGCGGTAGGCATCGTTGGTGGTTTGTTGCTGGCAAGATCCAGGCCGGAGATTTTGCCGGAAACTG
GTGTGCTGTCCATGCTGGCGGGTGGCGCGTCGGTGATGCCGATTCTGGCCCGAGAGTTGGGCGCTGATTTCCGCTATGTG
GCGCTGACGCAGTACCTCAGGTTGTTGGTTGTGTCCATGACGTTGCCGCTGGTGACGCACTTTTTCGTCCCTGGCGGGGC
GGATTTGGGATCGCCGCCTGAGAAATGGTTGGACGTGTTGAGTTTGGGAGAGTTCGGGACGTCGATAAGCGTTTTATCGC
TGCTGGTGCTCTTCGGTATTGTGCTGGCCGGCGAACCTCTCGGCAGGTTGCTGCGCTTGCCTGCCCCTGCGGTGATGGGG
CCGCTGATCCTGACCGTGCTGGTGAGTTTTGTGATTCCAGATGATCTCAGCCTGCAACCGCCAACCGTGTTTAAGATTAT
CGCGTTCATGGCGATCGGTTGGATGTGTGGCGGTGCCTTGAATATGACCGCGCTGAAGGTGTTTTCTAAGCAGCTTCCGG
CCACGTTCTTGTTTATTTTCGCGCTGCTTGCGGTGTGCGCAGGTGCGGCGGGGCTGCTCACCTGGTGGTTGGATATCAGC
TTCTTCGAGGCTTACCTAGCAACCAGCCCTGGAGCTCTGGAGACGGTGTTGGCGCTGTCCTCGGAAGGATCTGCAGGCCC
GGTGGTGGTCACGATCCAGATCATTCGACTACTGGCAATCTTGACCATCGCCGGTTTGATCCCCACGCTACTGCGACGCA
TTTTGCGTAGGGATCGTTAA

Upstream 100 bases:

>100_bases
TGCTGATCACGCCTGACTCCTATGAAGTGTTGACCGATTCCGCTGCTAAAGTGAAAGCGACATTATGAAATAAACGTGGA
TCAAGGAGTCCGGTGCCCAA

Downstream 100 bases:

>100_bases
AGGCCTTCTAGTTCAGCACCTGATCGCGCAAAATGCCCATCGGGATGCTGCCATAGGACAATGCCTTGCTGTGGAATTGC
GCCAAGGTTTGCCCCTGGCT

Product: transport protein

Products: NA

Alternate protein names: AidB regulator [H]

Number of amino acids: Translated: 379; Mature: 378

Protein sequence:

>379_residues
MSDKEPDPHEQIPEKPSRKVIALRWCIVAPLSLAVGWLFTMWGVPAAWILGAILVAGVCALTTGQDLPMAKGVHVFGRSI
VAMLAALPLISSSGSELVRFLIPGLVISFFTIAVGIVGGLLLARSRPEILPETGVLSMLAGGASVMPILARELGADFRYV
ALTQYLRLLVVSMTLPLVTHFFVPGGADLGSPPEKWLDVLSLGEFGTSISVLSLLVLFGIVLAGEPLGRLLRLPAPAVMG
PLILTVLVSFVIPDDLSLQPPTVFKIIAFMAIGWMCGGALNMTALKVFSKQLPATFLFIFALLAVCAGAAGLLTWWLDIS
FFEAYLATSPGALETVLALSSEGSAGPVVVTIQIIRLLAILTIAGLIPTLLRRILRRDR

Sequences:

>Translated_379_residues
MSDKEPDPHEQIPEKPSRKVIALRWCIVAPLSLAVGWLFTMWGVPAAWILGAILVAGVCALTTGQDLPMAKGVHVFGRSI
VAMLAALPLISSSGSELVRFLIPGLVISFFTIAVGIVGGLLLARSRPEILPETGVLSMLAGGASVMPILARELGADFRYV
ALTQYLRLLVVSMTLPLVTHFFVPGGADLGSPPEKWLDVLSLGEFGTSISVLSLLVLFGIVLAGEPLGRLLRLPAPAVMG
PLILTVLVSFVIPDDLSLQPPTVFKIIAFMAIGWMCGGALNMTALKVFSKQLPATFLFIFALLAVCAGAAGLLTWWLDIS
FFEAYLATSPGALETVLALSSEGSAGPVVVTIQIIRLLAILTIAGLIPTLLRRILRRDR
>Mature_378_residues
SDKEPDPHEQIPEKPSRKVIALRWCIVAPLSLAVGWLFTMWGVPAAWILGAILVAGVCALTTGQDLPMAKGVHVFGRSIV
AMLAALPLISSSGSELVRFLIPGLVISFFTIAVGIVGGLLLARSRPEILPETGVLSMLAGGASVMPILARELGADFRYVA
LTQYLRLLVVSMTLPLVTHFFVPGGADLGSPPEKWLDVLSLGEFGTSISVLSLLVLFGIVLAGEPLGRLLRLPAPAVMGP
LILTVLVSFVIPDDLSLQPPTVFKIIAFMAIGWMCGGALNMTALKVFSKQLPATFLFIFALLAVCAGAAGLLTWWLDISF
FEAYLATSPGALETVLALSSEGSAGPVVVTIQIIRLLAILTIAGLIPTLLRRILRRDR

Specific function: Seems to be involved in the regulation of AidB [H]

COG id: COG3180

COG function: function code R; Putative ammonia monooxygenase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AbrB family [H]

Homologues:

Organism=Escherichia coli, GI87081776, Length=344, Percent_Identity=32.5581395348837, Blast_Score=97, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017516
- InterPro:   IPR007820 [H]

Pfam domain/function: PF05145 AmoA [H]

EC number: NA

Molecular weight: Translated: 40264; Mature: 40133

Theoretical pI: Translated: 8.33; Mature: 8.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDKEPDPHEQIPEKPSRKVIALRWCIVAPLSLAVGWLFTMWGVPAAWILGAILVAGVCA
CCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
LTTGQDLPMAKGVHVFGRSIVAMLAALPLISSSGSELVRFLIPGLVISFFTIAVGIVGGL
HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLARSRPEILPETGVLSMLAGGASVMPILARELGADFRYVALTQYLRLLVVSMTLPLVTH
HHHCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
FFVPGGADLGSPPEKWLDVLSLGEFGTSISVLSLLVLFGIVLAGEPLGRLLRLPAPAVMG
HHCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHH
PLILTVLVSFVIPDDLSLQPPTVFKIIAFMAIGWMCGGALNMTALKVFSKQLPATFLFIF
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHH
ALLAVCAGAAGLLTWWLDISFFEAYLATSPGALETVLALSSEGSAGPVVVTIQIIRLLAI
HHHHHHHCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
LTIAGLIPTLLRRILRRDR
HHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SDKEPDPHEQIPEKPSRKVIALRWCIVAPLSLAVGWLFTMWGVPAAWILGAILVAGVCA
CCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
LTTGQDLPMAKGVHVFGRSIVAMLAALPLISSSGSELVRFLIPGLVISFFTIAVGIVGGL
HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLARSRPEILPETGVLSMLAGGASVMPILARELGADFRYVALTQYLRLLVVSMTLPLVTH
HHHCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
FFVPGGADLGSPPEKWLDVLSLGEFGTSISVLSLLVLFGIVLAGEPLGRLLRLPAPAVMG
HHCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHH
PLILTVLVSFVIPDDLSLQPPTVFKIIAFMAIGWMCGGALNMTALKVFSKQLPATFLFIF
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHH
ALLAVCAGAAGLLTWWLDISFFEAYLATSPGALETVLALSSEGSAGPVVVTIQIIRLLAI
HHHHHHHCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
LTIAGLIPTLLRRILRRDR
HHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503; 8002588 [H]