Definition Corynebacterium glutamicum ATCC 13032, complete genome.
Accession NC_006958
Length 3,282,708

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The map label for this gene is panD

Identifier: 62389029

GI number: 62389029

Start: 147571

End: 147981

Strand: Reverse

Name: panD

Synonym: cg0172

Alternate gene names: 62389029

Gene position: 147981-147571 (Counterclockwise)

Preceding gene: 62389031

Following gene: 62389026

Centisome position: 4.51

GC content: 53.28

Gene sequence:

>411_bases
ATGCTGCGCACCATCCTCGGAAGTAAGATTCACCGAGCCACTGTCACTCAAGCTGATCTAGATTATGTTGGCTCTGTAAC
CATCGACGCCGACCTGGTTCACGCCGCCGGATTGATCGAAGGCGAAAAAGTTGCCATCGTAGACATCACCAACGGCGCTC
GTCTGGAAACTTATGTCATTGTGGGCGACGCCGGAACGGGCAATATTTGCATCAATGGTGCCGCTGCACACCTTATTAAT
CCTGGCGATCTTGTGATCATCATGAGCTACCTTCAGGCAACTGATGCGGAAGCCAAGGCGTATGAGCCAAAGATTGTGCA
CGTGGACGCCGACAACCGCATCGTTGCGCTCGGCAACGATCTTGCGGAAGCACTACCTGGATCCGGGCTTTTGACGTCGA
GAAGCATTTAG

Upstream 100 bases:

>100_bases
ACGCGGGGGTTGTTGCCGGATCGAAATATTCCTTTCCTTGTCATCTCACGCTATGATTTCTAAAACTTGCAGGACAACCC
CCATAAGGACACCACAGGAC

Downstream 100 bases:

>100_bases
CGTTTTAGCTCGCCAATATTGCTGCCGGCCTCGTTGAAAATGGTCATGGTGGCATCGGTGACGGTGGCGGTGTGCATCTG
GGACAGCCAATCGTTGACGC

Product: aspartate alpha-decarboxylase

Products: NA

Alternate protein names: Aspartate alpha-decarboxylase

Number of amino acids: Translated: 136; Mature: 136

Protein sequence:

>136_residues
MLRTILGSKIHRATVTQADLDYVGSVTIDADLVHAAGLIEGEKVAIVDITNGARLETYVIVGDAGTGNICINGAAAHLIN
PGDLVIIMSYLQATDAEAKAYEPKIVHVDADNRIVALGNDLAEALPGSGLLTSRSI

Sequences:

>Translated_136_residues
MLRTILGSKIHRATVTQADLDYVGSVTIDADLVHAAGLIEGEKVAIVDITNGARLETYVIVGDAGTGNICINGAAAHLIN
PGDLVIIMSYLQATDAEAKAYEPKIVHVDADNRIVALGNDLAEALPGSGLLTSRSI
>Mature_136_residues
MLRTILGSKIHRATVTQADLDYVGSVTIDADLVHAAGLIEGEKVAIVDITNGARLETYVIVGDAGTGNICINGAAAHLIN
PGDLVIIMSYLQATDAEAKAYEPKIVHVDADNRIVALGNDLAEALPGSGLLTSRSI

Specific function: Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine

COG id: COG0853

COG function: function code H; Aspartate 1-decarboxylase

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the panD family

Homologues:

Organism=Escherichia coli, GI1786323, Length=126, Percent_Identity=42.8571428571429, Blast_Score=112, Evalue=8e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PAND_CORGB (A4QAD0)

Other databases:

- EMBL:   AP009044
- RefSeq:   YP_001137079.1
- ProteinModelPortal:   A4QAD0
- SMR:   A4QAD0
- STRING:   A4QAD0
- GeneID:   4993400
- GenomeReviews:   AP009044_GR
- KEGG:   cgt:cgR_0214
- eggNOG:   COG0853
- HOGENOM:   HBG302821
- OMA:   LYSKIHR
- ProtClustDB:   PRK05449
- GO:   GO:0005737
- GO:   GO:0005488
- HAMAP:   MF_00446
- InterPro:   IPR009010
- InterPro:   IPR003190
- Gene3D:   G3DSA:2.40.40.20
- PANTHER:   PTHR21012
- PIRSF:   PIRSF006246
- ProDom:   PD009294
- TIGRFAMs:   TIGR00223

Pfam domain/function: PF02261 Asp_decarbox; SSF50692 Asp_decarb_fold

EC number: =4.1.1.11

Molecular weight: Translated: 14147; Mature: 14147

Theoretical pI: Translated: 4.50; Mature: 4.50

Prosite motif: NA

Important sites: ACT_SITE 25-25 ACT_SITE 58-58 BINDING 57-57

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRTILGSKIHRATVTQADLDYVGSVTIDADLVHAAGLIEGEKVAIVDITNGARLETYVI
CCCCHHCCCCCEEEECCCCCCCEEEEEECHHHHEECCCCCCCEEEEEEECCCCEEEEEEE
VGDAGTGNICINGAAAHLINPGDLVIIMSYLQATDAEAKAYEPKIVHVDADNRIVALGND
EECCCCCCEEEECCEEEEECCCCEEEEEEHHHCCCCCCCCCCCEEEEECCCCEEEEECCC
LAEALPGSGLLTSRSI
HHHHCCCCCCEEECCC
>Mature Secondary Structure
MLRTILGSKIHRATVTQADLDYVGSVTIDADLVHAAGLIEGEKVAIVDITNGARLETYVI
CCCCHHCCCCCEEEECCCCCCCEEEEEECHHHHEECCCCCCCEEEEEEECCCCEEEEEEE
VGDAGTGNICINGAAAHLINPGDLVIIMSYLQATDAEAKAYEPKIVHVDADNRIVALGND
EECCCCCCEEEECCEEEEECCCCEEEEEEHHHCCCCCCCCCCCEEEEECCCCEEEEECCC
LAEALPGSGLLTSRSI
HHHHCCCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA