Click here to switch to the map view.

The map label for this gene is 62185524

Identifier: 62185524

GI number: 62185524

Start: 1078348

End: 1079670

Strand: Direct

Name: 62185524

Synonym: CAB924

Alternate gene names: NA

Gene position: 1078348-1079670 (Clockwise)

Preceding gene: 62185523

Following gene: 62185526

Centisome position: 94.23

GC content: 46.94

Gene sequence:

>1323_bases
ATGACATCAGGAGTTAGTGGAAATAACAGTGCTGATCCTTCATTAGCTGCTCAGCTTGCACAAAATGCCAGTTTAGCAGC
TACTAAAGCTCAAGGACAAGGTAAAACAGGGAATACACAAGGTGCGCAAGAAGAGGTCGCCGCAGGTTTTGAGGATCTGA
TTCAAGAAACTCAAACTCAGGGAACTTCTAAAAAAGAAGCCTCTTCGCAAACATCAAAAAGTTCTAAAACTGATAAATCT
GAAAAATCCTCCTCTTCTACGTCGGTATCCAGTGCTTCGAGTACTGTTACAGCTCAAGCGGTGAAAGGGCCTAAAGGACT
GCAACAAAATAACTATGAGCTCCCACAACTTCCCACGCCCGAGAATACAGAAGTCAATGGTGTGGTGATTAAAAAAGGGA
TGGGAACTCTTGCCCTCTTGGGATTAATTATGACACTACTGGCACAAGCGAGTGCAAAATCCTGGTCTTCACAGTTCCAA
CAACAAAACCAGGCTATCCAAAACCAAGTAGCTATGGCTCCAGAAATCGGAAACGCGATTCGAACTCAAGCGAATCACCA
AGCTGCGGCTACAGAAGCTCAAGCTAAACAAAGCATGATCTCGGGTATTGTAAATATCGTAGGTTTTGCTGTTGCCGTTG
GTGGTGGTATCCTGTCTGCAGCAAAAAGCTTAGGGGGATTAAAATCTGCAGCTTTTGCAAAAGAAACCGCGGGTGCTGCT
GGATCCGCAGCCAGCTCTGCAGCATCTCAAGCTTCAAAAATGGCTACAGATGCCGCGAGCACAGCAGCTAAAACAGCAAC
ATCGGCGGCATCCACTGCTGCGGGTTCTGCTGCTCAAGGCGCAGCAAAAGCAGCCGCAGGATTGGCAGACGACATGGCCA
GTGCTGCTGCAAAAGCTACAGCAGGTGCTGCAGGAAAAAGCGGTGGTCTATTTGGTAAAGCTTTAAATACCCCAGGATGG
AAAGACAAAATTGCCCGAGGTATGAACGTAGTCAAAACTCAGGGGGGTCGTGCTGCAGCTTTCGCTGGTAGAGCCCTTTC
GACATCTATGCAAATGTCTCAGATGGTTCACGCACTTACCGCAGGTATTGATGGGATCGTTGGGGGCGTTATGGGTGCCG
AAATCGCTCACCACCAAAAACAAGCCGGTATGGCGGAAGCTCATGCTGAAGAATTGAAACAATTGTCTTCTATTCAGAGC
CAATATGCAGGACAAGCTCAACAGCTTCAAGAGCAGTCACAACAAAGCTTCAACTCTGCTTTGCAAACTCTACAAAATAT
AGCGGACTCTCAAACACAAACAACTTCTGCAATCTTTAGCTAA

Upstream 100 bases:

>100_bases
CAACTAAATTGGGTGCTCAAATTGCTAAAGCCTTCCAAGCTATTAGCTCAGGCTTAGCATCAGCAGTATAAAAATTATTT
ATTAAGGGGACATTTTTGCT

Downstream 100 bases:

>100_bases
TATAGCTTTTCTTCTTCGGATAAGCAAAAGGGCTCAATGCATATTGAGCCCTTGTTTATGTAAATCCGCTTTACATTAAG
AAACAATGTAGCCTTGGCGA

Product: putative inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 440; Mature: 439

Protein sequence:

>440_residues
MTSGVSGNNSADPSLAAQLAQNASLAATKAQGQGKTGNTQGAQEEVAAGFEDLIQETQTQGTSKKEASSQTSKSSKTDKS
EKSSSSTSVSSASSTVTAQAVKGPKGLQQNNYELPQLPTPENTEVNGVVIKKGMGTLALLGLIMTLLAQASAKSWSSQFQ
QQNQAIQNQVAMAPEIGNAIRTQANHQAAATEAQAKQSMISGIVNIVGFAVAVGGGILSAAKSLGGLKSAAFAKETAGAA
GSAASSAASQASKMATDAASTAAKTATSAASTAAGSAAQGAAKAAAGLADDMASAAAKATAGAAGKSGGLFGKALNTPGW
KDKIARGMNVVKTQGGRAAAFAGRALSTSMQMSQMVHALTAGIDGIVGGVMGAEIAHHQKQAGMAEAHAEELKQLSSIQS
QYAGQAQQLQEQSQQSFNSALQTLQNIADSQTQTTSAIFS

Sequences:

>Translated_440_residues
MTSGVSGNNSADPSLAAQLAQNASLAATKAQGQGKTGNTQGAQEEVAAGFEDLIQETQTQGTSKKEASSQTSKSSKTDKS
EKSSSSTSVSSASSTVTAQAVKGPKGLQQNNYELPQLPTPENTEVNGVVIKKGMGTLALLGLIMTLLAQASAKSWSSQFQ
QQNQAIQNQVAMAPEIGNAIRTQANHQAAATEAQAKQSMISGIVNIVGFAVAVGGGILSAAKSLGGLKSAAFAKETAGAA
GSAASSAASQASKMATDAASTAAKTATSAASTAAGSAAQGAAKAAAGLADDMASAAAKATAGAAGKSGGLFGKALNTPGW
KDKIARGMNVVKTQGGRAAAFAGRALSTSMQMSQMVHALTAGIDGIVGGVMGAEIAHHQKQAGMAEAHAEELKQLSSIQS
QYAGQAQQLQEQSQQSFNSALQTLQNIADSQTQTTSAIFS
>Mature_439_residues
TSGVSGNNSADPSLAAQLAQNASLAATKAQGQGKTGNTQGAQEEVAAGFEDLIQETQTQGTSKKEASSQTSKSSKTDKSE
KSSSSTSVSSASSTVTAQAVKGPKGLQQNNYELPQLPTPENTEVNGVVIKKGMGTLALLGLIMTLLAQASAKSWSSQFQQ
QNQAIQNQVAMAPEIGNAIRTQANHQAAATEAQAKQSMISGIVNIVGFAVAVGGGILSAAKSLGGLKSAAFAKETAGAAG
SAASSAASQASKMATDAASTAAKTATSAASTAAGSAAQGAAKAAAGLADDMASAAAKATAGAAGKSGGLFGKALNTPGWK
DKIARGMNVVKTQGGRAAAFAGRALSTSMQMSQMVHALTAGIDGIVGGVMGAEIAHHQKQAGMAEAHAEELKQLSSIQSQ
YAGQAQQLQEQSQQSFNSALQTLQNIADSQTQTTSAIFS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the chlamydial CPn_0808/CT579/TC_0868 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006972 [H]

Pfam domain/function: PF04888 SseC [H]

EC number: NA

Molecular weight: Translated: 43881; Mature: 43750

Theoretical pI: Translated: 10.03; Mature: 10.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSGVSGNNSADPSLAAQLAQNASLAATKAQGQGKTGNTQGAQEEVAAGFEDLIQETQTQ
CCCCCCCCCCCCHHHHHHHHHCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHC
GTSKKEASSQTSKSSKTDKSEKSSSSTSVSSASSTVTAQAVKGPKGLQQNNYELPQLPTP
CCCHHHHHHHHHHCCCCCHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
ENTEVNGVVIKKGMGTLALLGLIMTLLAQASAKSWSSQFQQQNQAIQNQVAMAPEIGNAI
CCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH
RTQANHQAAATEAQAKQSMISGIVNIVGFAVAVGGGILSAAKSLGGLKSAAFAKETAGAA
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCC
GSAASSAASQASKMATDAASTAAKTATSAASTAAGSAAQGAAKAAAGLADDMASAAAKAT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
AGAAGKSGGLFGKALNTPGWKDKIARGMNVVKTQGGRAAAFAGRALSTSMQMSQMVHALT
HCCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
AGIDGIVGGVMGAEIAHHQKQAGMAEAHAEELKQLSSIQSQYAGQAQQLQEQSQQSFNSA
HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
LQTLQNIADSQTQTTSAIFS
HHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TSGVSGNNSADPSLAAQLAQNASLAATKAQGQGKTGNTQGAQEEVAAGFEDLIQETQTQ
CCCCCCCCCCCHHHHHHHHHCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHC
GTSKKEASSQTSKSSKTDKSEKSSSSTSVSSASSTVTAQAVKGPKGLQQNNYELPQLPTP
CCCHHHHHHHHHHCCCCCHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
ENTEVNGVVIKKGMGTLALLGLIMTLLAQASAKSWSSQFQQQNQAIQNQVAMAPEIGNAI
CCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH
RTQANHQAAATEAQAKQSMISGIVNIVGFAVAVGGGILSAAKSLGGLKSAAFAKETAGAA
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCC
GSAASSAASQASKMATDAASTAAKTATSAASTAAGSAAQGAAKAAAGLADDMASAAAKAT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
AGAAGKSGGLFGKALNTPGWKDKIARGMNVVKTQGGRAAAFAGRALSTSMQMSQMVHALT
HCCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
AGIDGIVGGVMGAEIAHHQKQAGMAEAHAEELKQLSSIQSQYAGQAQQLQEQSQQSFNSA
HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
LQTLQNIADSQTQTTSAIFS
HHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10684935 [H]