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The map label for this gene is 62185476

Identifier: 62185476

GI number: 62185476

Start: 1017866

End: 1018687

Strand: Direct

Name: 62185476

Synonym: CAB874

Alternate gene names: NA

Gene position: 1017866-1018687 (Clockwise)

Preceding gene: 62185475

Following gene: 62185477

Centisome position: 88.94

GC content: 41.12

Gene sequence:

>822_bases
ATGACAATTCCATTTCAACCTGTCGCCTCTTGGGCAAACGTATCTCCAAAAGTGATGAAGAAGTTTCACAAGTTTTACTG
TGGGGGAACATTTTCCGCTGAAGATGCAGAAAGTAAAGGGGCTCATCTGATTATCGGCAGTCAAGGCCATCGCCTCATGG
GGAATTACGTCATATTCTATTGGTTGATCGATAAGGTAAATGGAAAAATTATGGACGCTAAATTCCAATATTTTGGCCAT
CCCTTTTTACTCGTCCTTGCTGAAGCTACGTGTAATTTAGTTATTGGCAAAACCTACGCACAAGCCTATAACCTTACGGT
GAACTCTATCGACACCGAACTCCGCTCTCATCCCAGCAAACCTGCCCTTCCAGAAAATAGCTCGTCTCTGTACCACAGTA
TCATCGATGCTTTGGATATTGCTGCAGAACAATGCATGGAAATTCCTCTTGAGGATGGTTCCCTTCCTCTCAAAGAATCT
TTCTTACCTTCAGAGATCGAAGACGCTAATCCTTATACTCAAGAAGCCTGGGAAGCTCTGTCCGTAGAATCACGACTACA
TGCTCTACGTACAATCACCGAAGATAAAATCTCTCCCTACGTAGCTCTTGATGGTGGTAGTGTACTTATTGAAAAACTGG
AAGGAAATATCGTAACAATTGCCTATGCAGGAAATTGTTCTGGATGTTTTTCTGCTATAGGATCTACATTGAATTCTATA
GGCCAACTTTTACGTGCCTACGTTTATTCTGAATTGCAAATTAAAGTAAATGAGGCCTCTTTAGATTTTTCTATGTCTCA
ATACTCCGACGAAACTAATTAA

Upstream 100 bases:

>100_bases
TTTCCTTTACAGAGAGAACGAAAGATGAACAGTTTACTACCTTAGGGCATGTTATCCAAGAGGGTATTGCCCACCTAAAA
TCTGCAATTGCGAGCTCCGT

Downstream 100 bases:

>100_bases
CTTTTAAAGTTCGTGAATTGTCAATAATTCGTATCTTTTGATAAAGAATAATAAAATGTTAATAACTCTATAATGATTTC
ATTATTTTTTCCTGAGGATT

Product: putative NifU-related protein

Products: NA

Alternate protein names: NifU-Like Protein; NifU Family Protein; NifU Protein Homolog; Iron-Sulfur Cluster Assembly Protein NifU; Nitrogen Fixation Related Protein NifU; NifU Protein; Nitrogen Fixation Protein NifU; Acetolactate Synthase Small Subunit; NIFU-Like Protein

Number of amino acids: Translated: 273; Mature: 272

Protein sequence:

>273_residues
MTIPFQPVASWANVSPKVMKKFHKFYCGGTFSAEDAESKGAHLIIGSQGHRLMGNYVIFYWLIDKVNGKIMDAKFQYFGH
PFLLVLAEATCNLVIGKTYAQAYNLTVNSIDTELRSHPSKPALPENSSSLYHSIIDALDIAAEQCMEIPLEDGSLPLKES
FLPSEIEDANPYTQEAWEALSVESRLHALRTITEDKISPYVALDGGSVLIEKLEGNIVTIAYAGNCSGCFSAIGSTLNSI
GQLLRAYVYSELQIKVNEASLDFSMSQYSDETN

Sequences:

>Translated_273_residues
MTIPFQPVASWANVSPKVMKKFHKFYCGGTFSAEDAESKGAHLIIGSQGHRLMGNYVIFYWLIDKVNGKIMDAKFQYFGH
PFLLVLAEATCNLVIGKTYAQAYNLTVNSIDTELRSHPSKPALPENSSSLYHSIIDALDIAAEQCMEIPLEDGSLPLKES
FLPSEIEDANPYTQEAWEALSVESRLHALRTITEDKISPYVALDGGSVLIEKLEGNIVTIAYAGNCSGCFSAIGSTLNSI
GQLLRAYVYSELQIKVNEASLDFSMSQYSDETN
>Mature_272_residues
TIPFQPVASWANVSPKVMKKFHKFYCGGTFSAEDAESKGAHLIIGSQGHRLMGNYVIFYWLIDKVNGKIMDAKFQYFGHP
FLLVLAEATCNLVIGKTYAQAYNLTVNSIDTELRSHPSKPALPENSSSLYHSIIDALDIAAEQCMEIPLEDGSLPLKESF
LPSEIEDANPYTQEAWEALSVESRLHALRTITEDKISPYVALDGGSVLIEKLEGNIVTIAYAGNCSGCFSAIGSTLNSIG
QLLRAYVYSELQIKVNEASLDFSMSQYSDETN

Specific function: Unknown

COG id: COG0822

COG function: function code C; NifU homolog involved in Fe-S cluster formation

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30067; Mature: 29936

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIPFQPVASWANVSPKVMKKFHKFYCGGTFSAEDAESKGAHLIIGSQGHRLMGNYVIFY
CCCCCHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCEECCCEEEEE
WLIDKVNGKIMDAKFQYFGHPFLLVLAEATCNLVIGKTYAQAYNLTVNSIDTELRSHPSK
EEEECCCCEEEEEEHHHHCCHHHEEEHHHHCCEEEECHHHHHHEEEHHHHHHHHHCCCCC
PALPENSSSLYHSIIDALDIAAEQCMEIPLEDGSLPLKESFLPSEIEDANPYTQEAWEAL
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCCCCCCHHHHHHHH
SVESRLHALRTITEDKISPYVALDGGSVLIEKLEGNIVTIAYAGNCSGCFSAIGSTLNSI
HHHHHHHHHHHHHHHHCCCEEEECCCCEEEEECCCCEEEEEEECCCHHHHHHHHHHHHHH
GQLLRAYVYSELQIKVNEASLDFSMSQYSDETN
HHHHHHHHHHHEEEEEECCCCCEEHHHCCCCCC
>Mature Secondary Structure 
TIPFQPVASWANVSPKVMKKFHKFYCGGTFSAEDAESKGAHLIIGSQGHRLMGNYVIFY
CCCCHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCEECCCEEEEE
WLIDKVNGKIMDAKFQYFGHPFLLVLAEATCNLVIGKTYAQAYNLTVNSIDTELRSHPSK
EEEECCCCEEEEEEHHHHCCHHHEEEHHHHCCEEEECHHHHHHEEEHHHHHHHHHCCCCC
PALPENSSSLYHSIIDALDIAAEQCMEIPLEDGSLPLKESFLPSEIEDANPYTQEAWEAL
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCCCCCCHHHHHHHH
SVESRLHALRTITEDKISPYVALDGGSVLIEKLEGNIVTIAYAGNCSGCFSAIGSTLNSI
HHHHHHHHHHHHHHHHCCCEEEECCCCEEEEECCCCEEEEEEECCCHHHHHHHHHHHHHH
GQLLRAYVYSELQIKVNEASLDFSMSQYSDETN
HHHHHHHHHHHEEEEEECCCCCEEHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA