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The map label for this gene is rmuC [H]

Identifier: 62185359

GI number: 62185359

Start: 861829

End: 863067

Strand: Direct

Name: rmuC [H]

Synonym: CAB747

Alternate gene names: 62185359

Gene position: 861829-863067 (Clockwise)

Preceding gene: 62185358

Following gene: 62185361

Centisome position: 75.31

GC content: 37.61

Gene sequence:

>1239_bases
ATGATAGACTTTTCAATAACGCATATTCTTGTTGCTTTCCTTGGCCTCAGCTTAGGGGTTGCTTTATCTTCTTATTATTA
TCGCAAGAGAGAATCTTCGTATTCCGAAGCAAGAAGAAACTTGGAACACGAAAATGAACTCTTGAAAAGTTCTTTAGAGT
TATCACGTCGTCAAGAACAACTGATGGAAGATTTCAGCAATAAACTTGCCGTATCTTCGCAATCTCTTATTAAAGAGATG
AAAGAAGAAACGAAGAGCTACTTCTCTGAGAAATCTAAAACTATTGAATCTATATTAACTCCTGTTCAGGCTACACTGAC
TGCCTTTAAGCAGAACTTAGAAACTTTCGAGACTAAACATGCTGAAGATCGAGGTTCCTTAAAAGAACAAATATCTCATC
TTCTTGCTGCAGAAAAAAAACTTGAAAAAGAAACGCAAGCCTTGACGGATATCTTAAAACATCCAGGATCACGCGGCCGT
TGGGGAGAGATTCAGTTAGAAAGAATCTTAGAGCTTTCAGGCATGCTTAAATATTGTGATTATGAAACACAAGCTACGGA
TGCTGAGGGTTCAGTACGCGCGGATATGATCATCCGTCTTCCGCACGAACGCTGTTTGGTTATTGATTCCAAGGCTCCAT
TTTCAGAAACTTATTTGTCCCAAGATACTTCTGATAAATCTGACCTGATAGGGAAAATCAAGGAGCATATCAAAACACTA
AAATCAAAAAGCTACTGGGAAAAATTTCATTATTCCCCAGAATTTGTTATTCTTTTCCTTCCTGGTGAGAGTATTTTTAA
TGATGCTCTACGTATTGCTCCTGAACTTATCGATATTGCAGCAACTTCTAATGTCATTCTATCGGGACCTTTAACACTAC
TGGCTTTATTAAAAACTGTTGCCCATACATGGAAACAAGAAAACTTAAGAGCGCAGATCCAGGAAATAGGGCAATTAGGA
AAAGAATTACACCATCGTTTACATGTAGTTTTTAACTATTTTCACAAGATTGGGAAAAATCTTAATAATACTGTGCAAAG
TTATAATGATATGTCATCTAGCTTGCAGCATAGGATATTACCCACTCTACGGAAATTCGAAGATTTAGAGATTACATCTT
CTCTACACAGAGTAGAGGATCCCTGTCCTATTCATAATCCCGCAATATCTTTTCTTCCAGGCTGCGAAGAAGATGACATC
GCTTCAGAAGATCGCCTACTCCAAGAAGATAAGCTGTAA

Upstream 100 bases:

>100_bases
TTGATCATTTTACCGAAGTATTTTTCTTAGTTTCTTGGTTATATGTTTTGGTAGCGTTCCCTATTTTTGCGATCACATAT
CAAAGAAAGACAAAACGGTT

Downstream 100 bases:

>100_bases
TACCTATAAAGCTGATTTTATCGGCAACTCTTGATCAAAGCGGCTAGCGTTATCTTGTAGCATTTCTTTCCCAGCAAAGG
AAACGAATGTTGCCTTATCT

Product: putative DNA recombination protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 412; Mature: 412

Protein sequence:

>412_residues
MIDFSITHILVAFLGLSLGVALSSYYYRKRESSYSEARRNLEHENELLKSSLELSRRQEQLMEDFSNKLAVSSQSLIKEM
KEETKSYFSEKSKTIESILTPVQATLTAFKQNLETFETKHAEDRGSLKEQISHLLAAEKKLEKETQALTDILKHPGSRGR
WGEIQLERILELSGMLKYCDYETQATDAEGSVRADMIIRLPHERCLVIDSKAPFSETYLSQDTSDKSDLIGKIKEHIKTL
KSKSYWEKFHYSPEFVILFLPGESIFNDALRIAPELIDIAATSNVILSGPLTLLALLKTVAHTWKQENLRAQIQEIGQLG
KELHHRLHVVFNYFHKIGKNLNNTVQSYNDMSSSLQHRILPTLRKFEDLEITSSLHRVEDPCPIHNPAISFLPGCEEDDI
ASEDRLLQEDKL

Sequences:

>Translated_412_residues
MIDFSITHILVAFLGLSLGVALSSYYYRKRESSYSEARRNLEHENELLKSSLELSRRQEQLMEDFSNKLAVSSQSLIKEM
KEETKSYFSEKSKTIESILTPVQATLTAFKQNLETFETKHAEDRGSLKEQISHLLAAEKKLEKETQALTDILKHPGSRGR
WGEIQLERILELSGMLKYCDYETQATDAEGSVRADMIIRLPHERCLVIDSKAPFSETYLSQDTSDKSDLIGKIKEHIKTL
KSKSYWEKFHYSPEFVILFLPGESIFNDALRIAPELIDIAATSNVILSGPLTLLALLKTVAHTWKQENLRAQIQEIGQLG
KELHHRLHVVFNYFHKIGKNLNNTVQSYNDMSSSLQHRILPTLRKFEDLEITSSLHRVEDPCPIHNPAISFLPGCEEDDI
ASEDRLLQEDKL
>Mature_412_residues
MIDFSITHILVAFLGLSLGVALSSYYYRKRESSYSEARRNLEHENELLKSSLELSRRQEQLMEDFSNKLAVSSQSLIKEM
KEETKSYFSEKSKTIESILTPVQATLTAFKQNLETFETKHAEDRGSLKEQISHLLAAEKKLEKETQALTDILKHPGSRGR
WGEIQLERILELSGMLKYCDYETQATDAEGSVRADMIIRLPHERCLVIDSKAPFSETYLSQDTSDKSDLIGKIKEHIKTL
KSKSYWEKFHYSPEFVILFLPGESIFNDALRIAPELIDIAATSNVILSGPLTLLALLKTVAHTWKQENLRAQIQEIGQLG
KELHHRLHVVFNYFHKIGKNLNNTVQSYNDMSSSLQHRILPTLRKFEDLEITSSLHRVEDPCPIHNPAISFLPGCEEDDI
ASEDRLLQEDKL

Specific function: Involved in DNA recombination [H]

COG id: COG1322

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rmuC family [H]

Homologues:

Organism=Escherichia coli, GI1790266, Length=403, Percent_Identity=26.7990074441687, Blast_Score=131, Evalue=6e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003798 [H]

Pfam domain/function: PF02646 RmuC [H]

EC number: NA

Molecular weight: Translated: 47162; Mature: 47162

Theoretical pI: Translated: 6.21; Mature: 6.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDFSITHILVAFLGLSLGVALSSYYYRKRESSYSEARRNLEHENELLKSSLELSRRQEQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHHHHHHHHH
LMEDFSNKLAVSSQSLIKEMKEETKSYFSEKSKTIESILTPVQATLTAFKQNLETFETKH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
AEDRGSLKEQISHLLAAEKKLEKETQALTDILKHPGSRGRWGEIQLERILELSGMLKYCD
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCC
YETQATDAEGSVRADMIIRLPHERCLVIDSKAPFSETYLSQDTSDKSDLIGKIKEHIKTL
CCCCCCCCCCCCCHHHHEECCCCCEEEEECCCCCHHHHHCCCCCCHHHHHHHHHHHHHHH
KSKSYWEKFHYSPEFVILFLPGESIFNDALRIAPELIDIAATSNVILSGPLTLLALLKTV
HHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
AHTWKQENLRAQIQEIGQLGKELHHRLHVVFNYFHKIGKNLNNTVQSYNDMSSSLQHRIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
PTLRKFEDLEITSSLHRVEDPCPIHNPAISFLPGCEEDDIASEDRLLQEDKL
HHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHCCC
>Mature Secondary Structure
MIDFSITHILVAFLGLSLGVALSSYYYRKRESSYSEARRNLEHENELLKSSLELSRRQEQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHHHHHHHHH
LMEDFSNKLAVSSQSLIKEMKEETKSYFSEKSKTIESILTPVQATLTAFKQNLETFETKH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
AEDRGSLKEQISHLLAAEKKLEKETQALTDILKHPGSRGRWGEIQLERILELSGMLKYCD
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCC
YETQATDAEGSVRADMIIRLPHERCLVIDSKAPFSETYLSQDTSDKSDLIGKIKEHIKTL
CCCCCCCCCCCCCHHHHEECCCCCEEEEECCCCCHHHHHCCCCCCHHHHHHHHHHHHHHH
KSKSYWEKFHYSPEFVILFLPGESIFNDALRIAPELIDIAATSNVILSGPLTLLALLKTV
HHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
AHTWKQENLRAQIQEIGQLGKELHHRLHVVFNYFHKIGKNLNNTVQSYNDMSSSLQHRIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
PTLRKFEDLEITSSLHRVEDPCPIHNPAISFLPGCEEDDIASEDRLLQEDKL
HHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10192388; 10684935; 10871362 [H]