| Definition | Chlamydophila abortus S26/3, complete genome. |
|---|---|
| Accession | NC_004552 |
| Length | 1,144,377 |
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The map label for this gene is pssA [H]
Identifier: 62185358
GI number: 62185358
Start: 861026
End: 861832
Strand: Direct
Name: pssA [H]
Synonym: CAB746
Alternate gene names: 62185358
Gene position: 861026-861832 (Clockwise)
Preceding gene: 62185354
Following gene: 62185359
Centisome position: 75.24
GC content: 40.52
Gene sequence:
>807_bases ATGGCAGAATTGGAACCAGAAATCCGAGGTAAGCGTCGAGTCGTGACTCCTAACGCTATCACTGCCTTCGGTCTCTGTTG TGGACTTTTTATTATTTTTAAGAGTGTTTTAAAGACATCATCTTCTGTAGAACTATTGCATCGTTTACAGGGGCTTTCGC TTTTGTTAATCAGTGCGATGATCGCGGATTTTTCTGATGGTGCTATTGCTCGCATTATGAAAGCGGAAAGTGCTTTCGGA GCACAATTTGATTCTCTTTCTGATGCTATAACATTCGGTATAGCGCCTCCACTCATTGCGATTAAGAGTCTGGATGGTGT GTATGCTGGGGGATTTTTTTCTTCCCTACTTTTAGTAACCTCGATCATTTACTCCCTGTGTGGAGTTTTACGGTTAGTCC GCTACAATTTGTTCTCTAAAAAACCTAACGAAACTACACGGCTTCCCTGCTTTATCGGTTTGCCGATTCCTGCTGCTGCT GCATGTGTTGTCTCTTTAGCTTTATTCATAGCCTCTGACTTTGGTACAGTACTTCCGGTACAAGTGCGTGTGACTTTGAT TTCTTTAGGTCTACTATTTATTGGAAGTCTTATGATCTCCCCGTGGAAGTTCCCGGGGCTCAAAAACCTACGTTTTAAAG TTTCTTCTTTTTTACTTGTTGTTACTACTGGTTTAGTCGCATGTTTGTTTTTCCTAGGTCTTGTTGATCATTTTACCGAA GTATTTTTCTTAGTTTCTTGGTTATATGTTTTGGTAGCGTTCCCTATTTTTGCGATCACATATCAAAGAAAGACAAAACG GTTATGA
Upstream 100 bases:
>100_bases ACATTTTTTAACTTAGATATACGATGATCTTTTTGGCAAAAACTTGTTGATTTTTGATGAATATATTATGCTATGCCTGT AACGAACTTCCGGAATTCTC
Downstream 100 bases:
>100_bases TAGACTTTTCAATAACGCATATTCTTGTTGCTTTCCTTGGCCTCAGCTTAGGGGTTGCTTTATCTTCTTATTATTATCGC AAGAGAGAATCTTCGTATTC
Product: putative phospholipid biosynthesis-related membrane protein
Products: NA
Alternate protein names: Phosphatidylserine synthase [H]
Number of amino acids: Translated: 268; Mature: 267
Protein sequence:
>268_residues MAELEPEIRGKRRVVTPNAITAFGLCCGLFIIFKSVLKTSSSVELLHRLQGLSLLLISAMIADFSDGAIARIMKAESAFG AQFDSLSDAITFGIAPPLIAIKSLDGVYAGGFFSSLLLVTSIIYSLCGVLRLVRYNLFSKKPNETTRLPCFIGLPIPAAA ACVVSLALFIASDFGTVLPVQVRVTLISLGLLFIGSLMISPWKFPGLKNLRFKVSSFLLVVTTGLVACLFFLGLVDHFTE VFFLVSWLYVLVAFPIFAITYQRKTKRL
Sequences:
>Translated_268_residues MAELEPEIRGKRRVVTPNAITAFGLCCGLFIIFKSVLKTSSSVELLHRLQGLSLLLISAMIADFSDGAIARIMKAESAFG AQFDSLSDAITFGIAPPLIAIKSLDGVYAGGFFSSLLLVTSIIYSLCGVLRLVRYNLFSKKPNETTRLPCFIGLPIPAAA ACVVSLALFIASDFGTVLPVQVRVTLISLGLLFIGSLMISPWKFPGLKNLRFKVSSFLLVVTTGLVACLFFLGLVDHFTE VFFLVSWLYVLVAFPIFAITYQRKTKRL >Mature_267_residues AELEPEIRGKRRVVTPNAITAFGLCCGLFIIFKSVLKTSSSVELLHRLQGLSLLLISAMIADFSDGAIARIMKAESAFGA QFDSLSDAITFGIAPPLIAIKSLDGVYAGGFFSSLLLVTSIIYSLCGVLRLVRYNLFSKKPNETTRLPCFIGLPIPAAAA CVVSLALFIASDFGTVLPVQVRVTLISLGLLFIGSLMISPWKFPGLKNLRFKVSSFLLVVTTGLVACLFFLGLVDHFTEV FFLVSWLYVLVAFPIFAITYQRKTKRL
Specific function: Unknown
COG id: COG1183
COG function: function code I; Phosphatidylserine synthase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDP-alcohol phosphatidyltransferase class-I family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6320864, Length=124, Percent_Identity=33.0645161290323, Blast_Score=66, Evalue=5e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004533 - InterPro: IPR000462 [H]
Pfam domain/function: PF01066 CDP-OH_P_transf [H]
EC number: =2.7.8.8 [H]
Molecular weight: Translated: 29215; Mature: 29084
Theoretical pI: Translated: 9.90; Mature: 9.90
Prosite motif: PS00379 CDP_ALCOHOL_P_TRANSF
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAELEPEIRGKRRVVTPNAITAFGLCCGLFIIFKSVLKTSSSVELLHRLQGLSLLLISAM CCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH IADFSDGAIARIMKAESAFGAQFDSLSDAITFGIAPPLIAIKSLDGVYAGGFFSSLLLVT HHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHH SIIYSLCGVLRLVRYNLFSKKPNETTRLPCFIGLPIPAAAACVVSLALFIASDFGTVLPV HHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHCCCHHHH QVRVTLISLGLLFIGSLMISPWKFPGLKNLRFKVSSFLLVVTTGLVACLFFLGLVDHFTE HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VFFLVSWLYVLVAFPIFAITYQRKTKRL HHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AELEPEIRGKRRVVTPNAITAFGLCCGLFIIFKSVLKTSSSVELLHRLQGLSLLLISAM CCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH IADFSDGAIARIMKAESAFGAQFDSLSDAITFGIAPPLIAIKSLDGVYAGGFFSSLLLVT HHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHH SIIYSLCGVLRLVRYNLFSKKPNETTRLPCFIGLPIPAAAACVVSLALFIASDFGTVLPV HHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHCCCHHHH QVRVTLISLGLLFIGSLMISPWKFPGLKNLRFKVSSFLLVVTTGLVACLFFLGLVDHFTE HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VFFLVSWLYVLVAFPIFAITYQRKTKRL HHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8002567; 9384377 [H]