| Definition | Chlamydophila abortus S26/3, complete genome. |
|---|---|
| Accession | NC_004552 |
| Length | 1,144,377 |
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The map label for this gene is yhgN [C]
Identifier: 62185332
GI number: 62185332
Start: 833428
End: 834036
Strand: Direct
Name: yhgN [C]
Synonym: CAB719
Alternate gene names: 62185332
Gene position: 833428-834036 (Clockwise)
Preceding gene: 62185331
Following gene: 62185333
Centisome position: 72.83
GC content: 36.95
Gene sequence:
>609_bases ATGCTAACTCTCATCAATCTTAGCTTATTATTTTACGTACTTTTTGATTCTCCTGGATCTATCCCTGTTTTCGTATCTCT GTTAAAGCGCTTTTCTGCCAAAAGGCAACAACGCATCATTCTCAGAGAATGTATTTTTGCTCTTGTTACCCTAATACTTT TTGTTACTTTCGGAAGAAAATTCTTCCACTTTCTTGACATTTCCTTGTACGCATTTCAATTTATTGGAGGCGTTCTACTG TTCTCCGTCTCATTAAAAATGATGCTTGTACCCCCACCAGTAGAATCCGACTCATCTGAACCACAATCCGAGCCCATCTT CTTTCCCCTGGCTTTCCCTGTAATCACTGGCCCTGCTGTAATTACTTCTTTACTCAGCTATATGGAAGAAGCTTTGTTAT CTAAAGAAATTATTTTCAGTGCTATGATCATTGCTTGGGTACTTTCCGTATTTACTTTATTAAGTTCGAGCTTTTTTAAT CACATTCTGGGATCTTCAGGCTTAGTCGCCTTAGAAAGATTATTCAGCATCGCGTTATTATTAATGTCGGCAAACCTCAT GCTTAAAGGTATTTCAATAGCATTTAATATAGGATTTTATATTCAGTAG
Upstream 100 bases:
>100_bases CCTTGCTACCCAAACAGTACTTGGTCTCTTCGCAACGATCGTGGGTACCCAACTACTCATGTCCGGACTACAACTCGCCT TCTTATAAAAGAGACATTTT
Downstream 100 bases:
>100_bases TGTAGATAAATGAAAAGAAATGATCCCTGCTGGTGTGGAAGCAAACGTAAATGGAAATATTGCCATCCTCTGGCCCCTAA ACTATCTTGGGAACAACAAA
Product: putative transmembrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 202; Mature: 202
Protein sequence:
>202_residues MLTLINLSLLFYVLFDSPGSIPVFVSLLKRFSAKRQQRIILRECIFALVTLILFVTFGRKFFHFLDISLYAFQFIGGVLL FSVSLKMMLVPPPVESDSSEPQSEPIFFPLAFPVITGPAVITSLLSYMEEALLSKEIIFSAMIIAWVLSVFTLLSSSFFN HILGSSGLVALERLFSIALLLMSANLMLKGISIAFNIGFYIQ
Sequences:
>Translated_202_residues MLTLINLSLLFYVLFDSPGSIPVFVSLLKRFSAKRQQRIILRECIFALVTLILFVTFGRKFFHFLDISLYAFQFIGGVLL FSVSLKMMLVPPPVESDSSEPQSEPIFFPLAFPVITGPAVITSLLSYMEEALLSKEIIFSAMIIAWVLSVFTLLSSSFFN HILGSSGLVALERLFSIALLLMSANLMLKGISIAFNIGFYIQ >Mature_202_residues MLTLINLSLLFYVLFDSPGSIPVFVSLLKRFSAKRQQRIILRECIFALVTLILFVTFGRKFFHFLDISLYAFQFIGGVLL FSVSLKMMLVPPPVESDSSEPQSEPIFFPLAFPVITGPAVITSLLSYMEEALLSKEIIFSAMIIAWVLSVFTLLSSSFFN HILGSSGLVALERLFSIALLLMSANLMLKGISIAFNIGFYIQ
Specific function: Unknown
COG id: COG2095
COG function: function code U; Multiple antibiotic transporter
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0056 (marC) family [H]
Homologues:
Organism=Escherichia coli, GI1789842, Length=195, Percent_Identity=31.7948717948718, Blast_Score=104, Evalue=5e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002771 [H]
Pfam domain/function: PF01914 MarC [H]
EC number: NA
Molecular weight: Translated: 22565; Mature: 22565
Theoretical pI: Translated: 8.46; Mature: 8.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTLINLSLLFYVLFDSPGSIPVFVSLLKRFSAKRQQRIILRECIFALVTLILFVTFGRK CEEEHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FFHFLDISLYAFQFIGGVLLFSVSLKMMLVPPPVESDSSEPQSEPIFFPLAFPVITGPAV HHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCEEEEHHHHHHCCHHH ITSLLSYMEEALLSKEIIFSAMIIAWVLSVFTLLSSSFFNHILGSSGLVALERLFSIALL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH LMSANLMLKGISIAFNIGFYIQ HHHHHHHHHHHHHEEEECEEEC >Mature Secondary Structure MLTLINLSLLFYVLFDSPGSIPVFVSLLKRFSAKRQQRIILRECIFALVTLILFVTFGRK CEEEHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FFHFLDISLYAFQFIGGVLLFSVSLKMMLVPPPVESDSSEPQSEPIFFPLAFPVITGPAV HHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCEEEEHHHHHHCCHHH ITSLLSYMEEALLSKEIIFSAMIIAWVLSVFTLLSSSFFNHILGSSGLVALERLFSIALL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH LMSANLMLKGISIAFNIGFYIQ HHHHHHHHHHHHHEEEECEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 10192388; 10684935; 10871362 [H]