| Definition | Chlamydophila abortus S26/3, complete genome. |
|---|---|
| Accession | NC_004552 |
| Length | 1,144,377 |
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The map label for this gene is yhgN [C]
Identifier: 62185331
GI number: 62185331
Start: 832807
End: 833415
Strand: Direct
Name: yhgN [C]
Synonym: CAB718
Alternate gene names: 62185331
Gene position: 832807-833415 (Clockwise)
Preceding gene: 62185329
Following gene: 62185332
Centisome position: 72.77
GC content: 41.05
Gene sequence:
>609_bases ATGGACACTTTTTATTCTTTATTACCTCAAGCTTGTATACTATTGCTGGCGACGGATGCCTTAACTAATGTGTTAGTGTT AAATCACGTACTAGCGCGTTACTCAAGAAAAGAACGGTTGTCACTATTAGTACGAGAAAGTCTGTTCGCTCTTTTTAGCA TGTTTGCTTTATATGAAGCCGCCGTGGGCACCTTGTATGTATTAAAAACTCCTCTATGTGCAATACAAGTTGTAGGAGGC ATTGCCGTCACATTGACAAGCATGAGGGCTATTTTAAACCTAAGTAAAGAAAATAGTTGGAAAGGTTTTACGACTCCCTC CGCTCTATCTATGGTAACGCCCATCGCTTTACCTCTAATGATCGGTCCTTCTTGGCTAGCAGCTTGTTGCATTTTGATAG GGAAACGTTACAGCTTCGCTTCCATTTCTCTTATTCTTATTCTTTCTTGGGTCTTTATTTCTCTAACCACTATAATCTTA CAAGTTTTTGTCAGCGGAGGAAAAGATAAGGCAAAGGTACTCCTTGCTACCCAAACAGTACTTGGTCTCTTCGCAACGAT CGTGGGTACCCAACTACTCATGTCCGGACTACAACTCGCCTTCTTATAA
Upstream 100 bases:
>100_bases TATCGATCATAAGATATTTTAGATCCTATTTGTCATGTTTCTTCGCACTTTAGTTGATTACCTTGAAAAATAATAGCCCT AGCATATAAAAATTCTTCCC
Downstream 100 bases:
>100_bases AAGAGACATTTTATGCTAACTCTCATCAATCTTAGCTTATTATTTTACGTACTTTTTGATTCTCCTGGATCTATCCCTGT TTTCGTATCTCTGTTAAAGC
Product: putative transmembrane protein
Products: NA
Alternate protein names: Transmembrane Protein
Number of amino acids: Translated: 202; Mature: 202
Protein sequence:
>202_residues MDTFYSLLPQACILLLATDALTNVLVLNHVLARYSRKERLSLLVRESLFALFSMFALYEAAVGTLYVLKTPLCAIQVVGG IAVTLTSMRAILNLSKENSWKGFTTPSALSMVTPIALPLMIGPSWLAACCILIGKRYSFASISLILILSWVFISLTTIIL QVFVSGGKDKAKVLLATQTVLGLFATIVGTQLLMSGLQLAFL
Sequences:
>Translated_202_residues MDTFYSLLPQACILLLATDALTNVLVLNHVLARYSRKERLSLLVRESLFALFSMFALYEAAVGTLYVLKTPLCAIQVVGG IAVTLTSMRAILNLSKENSWKGFTTPSALSMVTPIALPLMIGPSWLAACCILIGKRYSFASISLILILSWVFISLTTIIL QVFVSGGKDKAKVLLATQTVLGLFATIVGTQLLMSGLQLAFL >Mature_202_residues MDTFYSLLPQACILLLATDALTNVLVLNHVLARYSRKERLSLLVRESLFALFSMFALYEAAVGTLYVLKTPLCAIQVVGG IAVTLTSMRAILNLSKENSWKGFTTPSALSMVTPIALPLMIGPSWLAACCILIGKRYSFASISLILILSWVFISLTTIIL QVFVSGGKDKAKVLLATQTVLGLFATIVGTQLLMSGLQLAFL
Specific function: Unknown
COG id: COG2095
COG function: function code U; Multiple antibiotic transporter
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21878; Mature: 21878
Theoretical pI: Translated: 9.77; Mature: 9.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTFYSLLPQACILLLATDALTNVLVLNHVLARYSRKERLSLLVRESLFALFSMFALYEA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVGTLYVLKTPLCAIQVVGGIAVTLTSMRAILNLSKENSWKGFTTPSALSMVTPIALPLM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHH IGPSWLAACCILIGKRYSFASISLILILSWVFISLTTIILQVFVSGGKDKAKVLLATQTV CCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH LGLFATIVGTQLLMSGLQLAFL HHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MDTFYSLLPQACILLLATDALTNVLVLNHVLARYSRKERLSLLVRESLFALFSMFALYEA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVGTLYVLKTPLCAIQVVGGIAVTLTSMRAILNLSKENSWKGFTTPSALSMVTPIALPLM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHH IGPSWLAACCILIGKRYSFASISLILILSWVFISLTTIILQVFVSGGKDKAKVLLATQTV CCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH LGLFATIVGTQLLMSGLQLAFL HHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA