| Definition | Chlamydophila abortus S26/3, complete genome. |
|---|---|
| Accession | NC_004552 |
| Length | 1,144,377 |
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The map label for this gene is 62185312
Identifier: 62185312
GI number: 62185312
Start: 810331
End: 811371
Strand: Direct
Name: 62185312
Synonym: CAB699
Alternate gene names: NA
Gene position: 810331-811371 (Clockwise)
Preceding gene: 62185311
Following gene: 62185317
Centisome position: 70.81
GC content: 42.07
Gene sequence:
>1041_bases ATGCGTATAGCAGTTTTAGGAGCAGGATATGCCGGGCTTTCTGTAACTTGGCATTTACTGCTGCATTCTCAGGGAACAGC AACTATTGATCTTTTTGATCCTGTACCTTTAGGTCATGGGGCTTCGGGATTGTCTTCAGGTCTCCTCCACGGATTTACTG GGAAAAAAGCGATTAAACCTCCCCTCGCCGATTTAGGAATTACCTCTACGCATAGCTTAATCACAGAAGCTAGCAAAGCA TTACATACCCCTATTGTTCTTTCCCGTGGGATCATCCGCCCAGCAGTAGACAATGAACAGGCGGAGATTTTTATGAAGCG TGTCGAGGAGTTTCCTCAAGAACTCGAGTGGTGGGAGAAAGCACGTTGTGAAATGACTGTCCCCGGTATTGTTTCTGATC TCGGAGCTTTGTTCATAAAGAACGGTGTAACCATAAATAATAACGCTTATATTAATGGTCTCTGGGATGCTTGTGCTAAT CTTGGCACCCAGTTTTACGATGAGCTTATAGAAAATCTCTCTGATATTGAAGAGTTTTATGAGCATATTATCGTTACACC AGGAGCGAATGCCCATTTCCTTCCCGAATTACAAAAACTCCCCTTATCCAACGTAAAAGGCCAGCTTATAGAAATTGCCT GGCCTAAGGATCTGGCTATACCACAATTCAGCATCAATGGCCGGAAGTATATGGTAGCAAACACAGAAAACCATACCTGT ATTTTAGGATCTACTTTCGAACATAATCAACCCGAAATTGTTCCTGACGAAAATGTTGCCTATAATGAAATTATGCCTCC TGCTCTCTCCCTATTTCCAGCTCTTAAAGATGCGACTATCCTGAATTATTATGCGGGGATGCGTTCATCAAGCTCGACAC GTTTACCCTTGATTAGTAGGGTAAAAGAAAACCTTTGGTTCCTAGGAGGTTTAGGATCCAAAGGTCTACTTTATCATGGC CTTACCGGAGATATGCTAGCTCAAGCTGTTTTAAAACAATCTACAGCTTATATAGCTAAAGAGTTTCTATTTACTCTTTA A
Upstream 100 bases:
>100_bases AATCACCCTTTGGGAGAGGCCTTTGCGCCTCTCTCATTTATCCTCAGGGGAGATATAGAGTGAATTTCTAAATTCAGATC CTAGATTTCAAGGTAGACTT
Downstream 100 bases:
>100_bases TCAGATGGTCTTGAGAGGTTTGCTTCATTAAGTAAAAGTCAAAAGAGAAGTTAAAGAAAAAAGAAAGAGCTGGTGTAAGA ATCAAAGCTATGGGCATGAC
Product: putative oxidoreductase
Products: NA
Alternate protein names: FAD Dependent Oxidoreductase; Oxidoreductase; Glycine Dehyrogenase; Glycine Oxidase; DadA Family Oxidoreductase
Number of amino acids: Translated: 346; Mature: 346
Protein sequence:
>346_residues MRIAVLGAGYAGLSVTWHLLLHSQGTATIDLFDPVPLGHGASGLSSGLLHGFTGKKAIKPPLADLGITSTHSLITEASKA LHTPIVLSRGIIRPAVDNEQAEIFMKRVEEFPQELEWWEKARCEMTVPGIVSDLGALFIKNGVTINNNAYINGLWDACAN LGTQFYDELIENLSDIEEFYEHIIVTPGANAHFLPELQKLPLSNVKGQLIEIAWPKDLAIPQFSINGRKYMVANTENHTC ILGSTFEHNQPEIVPDENVAYNEIMPPALSLFPALKDATILNYYAGMRSSSSTRLPLISRVKENLWFLGGLGSKGLLYHG LTGDMLAQAVLKQSTAYIAKEFLFTL
Sequences:
>Translated_346_residues MRIAVLGAGYAGLSVTWHLLLHSQGTATIDLFDPVPLGHGASGLSSGLLHGFTGKKAIKPPLADLGITSTHSLITEASKA LHTPIVLSRGIIRPAVDNEQAEIFMKRVEEFPQELEWWEKARCEMTVPGIVSDLGALFIKNGVTINNNAYINGLWDACAN LGTQFYDELIENLSDIEEFYEHIIVTPGANAHFLPELQKLPLSNVKGQLIEIAWPKDLAIPQFSINGRKYMVANTENHTC ILGSTFEHNQPEIVPDENVAYNEIMPPALSLFPALKDATILNYYAGMRSSSSTRLPLISRVKENLWFLGGLGSKGLLYHG LTGDMLAQAVLKQSTAYIAKEFLFTL >Mature_346_residues MRIAVLGAGYAGLSVTWHLLLHSQGTATIDLFDPVPLGHGASGLSSGLLHGFTGKKAIKPPLADLGITSTHSLITEASKA LHTPIVLSRGIIRPAVDNEQAEIFMKRVEEFPQELEWWEKARCEMTVPGIVSDLGALFIKNGVTINNNAYINGLWDACAN LGTQFYDELIENLSDIEEFYEHIIVTPGANAHFLPELQKLPLSNVKGQLIEIAWPKDLAIPQFSINGRKYMVANTENHTC ILGSTFEHNQPEIVPDENVAYNEIMPPALSLFPALKDATILNYYAGMRSSSSTRLPLISRVKENLWFLGGLGSKGLLYHG LTGDMLAQAVLKQSTAYIAKEFLFTL
Specific function: Unknown
COG id: COG0665
COG function: function code E; Glycine/D-amino acid oxidases (deaminating)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37953; Mature: 37953
Theoretical pI: Translated: 5.75; Mature: 5.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIAVLGAGYAGLSVTWHLLLHSQGTATIDLFDPVPLGHGASGLSSGLLHGFTGKKAIKP CEEEEEECCCCHHHEEEEEEEECCCCEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCCCC PLADLGITSTHSLITEASKALHTPIVLSRGIIRPAVDNEQAEIFMKRVEEFPQELEWWEK CHHHCCCCCHHHHHHHHHHHHCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH ARCEMTVPGIVSDLGALFIKNGVTINNNAYINGLWDACANLGTQFYDELIENLSDIEEFY CCCCEECCHHHHHHHHHHHHCCEEECCCCEECHHHHHHHHCCHHHHHHHHHHHHHHHHHH EHIIVTPGANAHFLPELQKLPLSNVKGQLIEIAWPKDLAIPQFSINGRKYMVANTENHTC HHEEECCCCCCCCCCHHHHCCCCCCCCCEEEEECCCCCCCCEEECCCCEEEEEECCCCEE ILGSTFEHNQPEIVPDENVAYNEIMPPALSLFPALKDATILNYYAGMRSSSSTRLPLISR EEECCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH VKENLWFLGGLGSKGLLYHGLTGDMLAQAVLKQSTAYIAKEFLFTL HHHCEEEEECCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRIAVLGAGYAGLSVTWHLLLHSQGTATIDLFDPVPLGHGASGLSSGLLHGFTGKKAIKP CEEEEEECCCCHHHEEEEEEEECCCCEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCCCC PLADLGITSTHSLITEASKALHTPIVLSRGIIRPAVDNEQAEIFMKRVEEFPQELEWWEK CHHHCCCCCHHHHHHHHHHHHCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH ARCEMTVPGIVSDLGALFIKNGVTINNNAYINGLWDACANLGTQFYDELIENLSDIEEFY CCCCEECCHHHHHHHHHHHHCCEEECCCCEECHHHHHHHHCCHHHHHHHHHHHHHHHHHH EHIIVTPGANAHFLPELQKLPLSNVKGQLIEIAWPKDLAIPQFSINGRKYMVANTENHTC HHEEECCCCCCCCCCHHHHCCCCCCCCCEEEEECCCCCCCCEEECCCCEEEEEECCCCEE ILGSTFEHNQPEIVPDENVAYNEIMPPALSLFPALKDATILNYYAGMRSSSSTRLPLISR EEECCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH VKENLWFLGGLGSKGLLYHGLTGDMLAQAVLKQSTAYIAKEFLFTL HHHCEEEEECCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA