| Definition | Chlamydophila abortus S26/3, complete genome. |
|---|---|
| Accession | NC_004552 |
| Length | 1,144,377 |
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The map label for this gene is 62185256
Identifier: 62185256
GI number: 62185256
Start: 739569
End: 740852
Strand: Direct
Name: 62185256
Synonym: CAB643
Alternate gene names: NA
Gene position: 739569-740852 (Clockwise)
Preceding gene: 62185255
Following gene: 62185257
Centisome position: 64.63
GC content: 36.68
Gene sequence:
>1284_bases ATGGATTTGGAAAAAATGATCGATTTCTTTTCTCGTTTTTTCATTCGTAATTGGCTGAGGAAAGTGGTGTCTTTGGGCTT TGCCATCATCATTTGGGTTCTCGTTGGGCAGACAGTAACGGTTACTCGTACGTTAAATAATATTCCTGTGCGTATTATTG ACCTCAATCCAGATCAAACTGTCTTAGGACTACAAAGTAACGGGTTATTAGATAAAAAAGTCTCGTTAACGATTACAGGA AATAAAAATACAGTTCATGATCTTCGCCCCACAAACTTGGAAGTCGTTATTAGTGCTACAGGACATTCAGAAAGTTGGAT AGCCGCTATTGATAAGTACAACCTTGTCAGTCTTGATGGGGAAACTAATATCCGTCGAGATATTCAAAGTGTTTCTACTG ATGATATTTTTATTCGCCTTACACAATATGTAACCGAAGATATTACCGTAACGATTACGACTCCTGTAGGTAGTCCTCCT AAAGGTTACGAATACTTAGATGTTTGGCCAAAATATCTTATTCAGAAAGTGAGCGGTCCTAAAGAATATGTCAACGCCCT TAAAGATCAAGGACTGGAGCTCACGTTCAATCTCAATAAGGTATCTTTTGAAGAATTAGAAAGGAATCGTATTGCTCAAG GGAATCATGATGAAATTATCTTTCCTATTCCTGAGGAATGGAAGAAAATTCTCATACCTTTTGGGAATACAAATACATAT GAAAACCTCAATGATCCTCAAGCGGATTTTTTACGTTTATTATTTTTAAAACAGGAATTTATTCCTCTAAATCTTAATCT CCCTGTTTTACTCTTCTTCCCTGTTAAATACAGCAACACGTTCAATCCTTTAGCCTATACGTTAGAGCCTTCCCACCCCA TTATTCTTAATCAGGGTATTTATCAAATTAATATCCCTCTGTATGTGAAAGATGTAAGTAAACTGTTCTTAGATGTCGTA AAAAATAACATTGCTTTAGCAGTTGTTATGGCTCCTCCACATGAGAATAACTCTGTCAATTGGGCTGTAGAGTTTATAGA TGAAAAGACTCTCGAGGACACCTTCGTTCAAGCCATCATGGCGCAAGAACATGGCATTCTTCATGACTTTGCTTTGATTG ACGAAACAGGAATACGTCATCGCTTCCGTGAATACCTAAGAAAACTTACCTTATTTGGCAAAGATGGATTTCCATTAAAC CTTTCTGCAGAGATTTCTCATAACAAGGTGATTATTCGTTCAAAACCTACAGAAACCTCAAAACTACATAAAAAAGATTG GTAG
Upstream 100 bases:
>100_bases GCGATGGCATTTTGACTCGTGGAGTCAAGATGGATAGATTTAAAGCTGTGCTGAGAAGTATCCTTACTCTCAAAGAACAA AAACATAAACCCTTTAGCTC
Downstream 100 bases:
>100_bases GAATTTCGTTATCTCTACCGCGTAATATTTATAACTCACAGCTTAAATAAGCATAAAAATTATAAAAACAGTTGTCAGAG TTATTGAGACTATTATAGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 427; Mature: 427
Protein sequence:
>427_residues MDLEKMIDFFSRFFIRNWLRKVVSLGFAIIIWVLVGQTVTVTRTLNNIPVRIIDLNPDQTVLGLQSNGLLDKKVSLTITG NKNTVHDLRPTNLEVVISATGHSESWIAAIDKYNLVSLDGETNIRRDIQSVSTDDIFIRLTQYVTEDITVTITTPVGSPP KGYEYLDVWPKYLIQKVSGPKEYVNALKDQGLELTFNLNKVSFEELERNRIAQGNHDEIIFPIPEEWKKILIPFGNTNTY ENLNDPQADFLRLLFLKQEFIPLNLNLPVLLFFPVKYSNTFNPLAYTLEPSHPIILNQGIYQINIPLYVKDVSKLFLDVV KNNIALAVVMAPPHENNSVNWAVEFIDEKTLEDTFVQAIMAQEHGILHDFALIDETGIRHRFREYLRKLTLFGKDGFPLN LSAEISHNKVIIRSKPTETSKLHKKDW
Sequences:
>Translated_427_residues MDLEKMIDFFSRFFIRNWLRKVVSLGFAIIIWVLVGQTVTVTRTLNNIPVRIIDLNPDQTVLGLQSNGLLDKKVSLTITG NKNTVHDLRPTNLEVVISATGHSESWIAAIDKYNLVSLDGETNIRRDIQSVSTDDIFIRLTQYVTEDITVTITTPVGSPP KGYEYLDVWPKYLIQKVSGPKEYVNALKDQGLELTFNLNKVSFEELERNRIAQGNHDEIIFPIPEEWKKILIPFGNTNTY ENLNDPQADFLRLLFLKQEFIPLNLNLPVLLFFPVKYSNTFNPLAYTLEPSHPIILNQGIYQINIPLYVKDVSKLFLDVV KNNIALAVVMAPPHENNSVNWAVEFIDEKTLEDTFVQAIMAQEHGILHDFALIDETGIRHRFREYLRKLTLFGKDGFPLN LSAEISHNKVIIRSKPTETSKLHKKDW >Mature_427_residues MDLEKMIDFFSRFFIRNWLRKVVSLGFAIIIWVLVGQTVTVTRTLNNIPVRIIDLNPDQTVLGLQSNGLLDKKVSLTITG NKNTVHDLRPTNLEVVISATGHSESWIAAIDKYNLVSLDGETNIRRDIQSVSTDDIFIRLTQYVTEDITVTITTPVGSPP KGYEYLDVWPKYLIQKVSGPKEYVNALKDQGLELTFNLNKVSFEELERNRIAQGNHDEIIFPIPEEWKKILIPFGNTNTY ENLNDPQADFLRLLFLKQEFIPLNLNLPVLLFFPVKYSNTFNPLAYTLEPSHPIILNQGIYQINIPLYVKDVSKLFLDVV KNNIALAVVMAPPHENNSVNWAVEFIDEKTLEDTFVQAIMAQEHGILHDFALIDETGIRHRFREYLRKLTLFGKDGFPLN LSAEISHNKVIIRSKPTETSKLHKKDW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48971; Mature: 48971
Theoretical pI: Translated: 6.20; Mature: 6.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLEKMIDFFSRFFIRNWLRKVVSLGFAIIIWVLVGQTVTVTRTLNNIPVRIIDLNPDQT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCEEEEECCCCCE VLGLQSNGLLDKKVSLTITGNKNTVHDLRPTNLEVVISATGHSESWIAAIDKYNLVSLDG EEEECCCCCCCCEEEEEEECCCCEECCCCCCCEEEEEEECCCCCCEEEEECCCEEEEECC ETNIRRDIQSVSTDDIFIRLTQYVTEDITVTITTPVGSPPKGYEYLDVWPKYLIQKVSGP CCHHHHHHHHCCCCHHEEEEEHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCH KEYVNALKDQGLELTFNLNKVSFEELERNRIAQGNHDEIIFPIPEEWKKILIPFGNTNTY HHHHHHHHHCCEEEEEEECCCCHHHHHHHHCCCCCCCEEEECCCHHCEEEEEECCCCCCC ENLNDPQADFLRLLFLKQEFIPLNLNLPVLLFFPVKYSNTFNPLAYTLEPSHPIILNQGI CCCCCCHHHHHHHHHHHHHCEEECCCCCEEEEEEEECCCCCCCEEEEECCCCCEEEECCE YQINIPLYVKDVSKLFLDVVKNNIALAVVMAPPHENNSVNWAVEFIDEKTLEDTFVQAIM EEEECCEEEHHHHHHHHHHHCCCEEEEEEECCCCCCCCEEEEEEEECHHHHHHHHHHHHH AQEHGILHDFALIDETGIRHRFREYLRKLTLFGKDGFPLNLSAEISHNKVIIRSKPTETS HHCCCCEEHHHHHCCCCHHHHHHHHHHHHHEECCCCCCEEEEEEECCCEEEEECCCCCHH KLHKKDW CCCCCCC >Mature Secondary Structure MDLEKMIDFFSRFFIRNWLRKVVSLGFAIIIWVLVGQTVTVTRTLNNIPVRIIDLNPDQT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCEEEEECCCCCE VLGLQSNGLLDKKVSLTITGNKNTVHDLRPTNLEVVISATGHSESWIAAIDKYNLVSLDG EEEECCCCCCCCEEEEEEECCCCEECCCCCCCEEEEEEECCCCCCEEEEECCCEEEEECC ETNIRRDIQSVSTDDIFIRLTQYVTEDITVTITTPVGSPPKGYEYLDVWPKYLIQKVSGP CCHHHHHHHHCCCCHHEEEEEHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCH KEYVNALKDQGLELTFNLNKVSFEELERNRIAQGNHDEIIFPIPEEWKKILIPFGNTNTY HHHHHHHHHCCEEEEEEECCCCHHHHHHHHCCCCCCCEEEECCCHHCEEEEEECCCCCCC ENLNDPQADFLRLLFLKQEFIPLNLNLPVLLFFPVKYSNTFNPLAYTLEPSHPIILNQGI CCCCCCHHHHHHHHHHHHHCEEECCCCCEEEEEEEECCCCCCCEEEEECCCCCEEEECCE YQINIPLYVKDVSKLFLDVVKNNIALAVVMAPPHENNSVNWAVEFIDEKTLEDTFVQAIM EEEECCEEEHHHHHHHHHHHCCCEEEEEEECCCCCCCCEEEEEEEECHHHHHHHHHHHHH AQEHGILHDFALIDETGIRHRFREYLRKLTLFGKDGFPLNLSAEISHNKVIIRSKPTETS HHCCCCEEHHHHHCCCCHHHHHHHHHHHHHEECCCCCCEEEEEEECCCEEEEECCCCCHH KLHKKDW CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA