| Definition | Chlamydophila abortus S26/3, complete genome. |
|---|---|
| Accession | NC_004552 |
| Length | 1,144,377 |
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The map label for this gene is ybbP [H]
Identifier: 62185255
GI number: 62185255
Start: 738793
End: 739587
Strand: Direct
Name: ybbP [H]
Synonym: CAB642
Alternate gene names: 62185255
Gene position: 738793-739587 (Clockwise)
Preceding gene: 62185251
Following gene: 62185256
Centisome position: 64.56
GC content: 38.99
Gene sequence:
>795_bases ATGCCCATAGATATTACTTACTATACAACACCCTTATTAGAGATTGTTCTGATTTGGGTAGTATTAAATTATCTTTTAAA GTTCTTTTGGGGAACTCGAGCCATGGACGTTGTCTTTGGTTTGCTAGCCTTTCTATTTCTCTTTGTTCTTGCAGACAAAC TACATTTTCCCATTATTCGACGATTGATGCTACATGTCGTTAATGTTGCTGCTATTGTCGTTTTTATTATTTTCCAGCCA GAAATACGGCTGGCTTTATCTCGTGTACGCTTTCATGGGAGAAAGTTTGTCATTGATTTACAGGATCAATTTATTGAGCA TCTGACTTCATGCATTTATCAAATGTCAGAAAGACAAATTGGCGCTCTTGTTGTTCTAGAAAATAAAGATTCTTTCGATG AATTCTTAAGCTTTTCTTCCGTAAAAATTAATGCGGACTTTTCAGAAGAACTTCTAGAAACAATTTTTGAGCCTTCTTCT CCTCTGCATGATGGAGCTGTAATCCTCAGAGCAGAAACCATAGCCTATGCTCGTGTTGTTCTTCCCCTAGCACAAGATAC AACACAGTTATCTCGTTCTATGGGGACTCGTCACCGCGCGGCGTTAGGGGCCAGCCAACGTACCGATGCATTGATCATCA TTGTCTCTGAAGAGAATGGTTGTGTATCCTTATCTCGCGATGGCATTTTGACTCGTGGAGTCAAGATGGATAGATTTAAA GCTGTGCTGAGAAGTATCCTTACTCTCAAAGAACAAAAACATAAACCCTTTAGCTCATGGATTTGGAAAAAATGA
Upstream 100 bases:
>100_bases CTCTATATGCTACAGTAGTATATTACCTTCTTTATAGAAAGCAGTCCATTGCCATTAAGGTGAGAATCTCTCCGAGTATT CTTAAGAAACTAGTAAAGCT
Downstream 100 bases:
>100_bases TCGATTTCTTTTCTCGTTTTTTCATTCGTAATTGGCTGAGGAAAGTGGTGTCTTTGGGCTTTGCCATCATCATTTGGGTT CTCGTTGGGCAGACAGTAAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 264; Mature: 263
Protein sequence:
>264_residues MPIDITYYTTPLLEIVLIWVVLNYLLKFFWGTRAMDVVFGLLAFLFLFVLADKLHFPIIRRLMLHVVNVAAIVVFIIFQP EIRLALSRVRFHGRKFVIDLQDQFIEHLTSCIYQMSERQIGALVVLENKDSFDEFLSFSSVKINADFSEELLETIFEPSS PLHDGAVILRAETIAYARVVLPLAQDTTQLSRSMGTRHRAALGASQRTDALIIIVSEENGCVSLSRDGILTRGVKMDRFK AVLRSILTLKEQKHKPFSSWIWKK
Sequences:
>Translated_264_residues MPIDITYYTTPLLEIVLIWVVLNYLLKFFWGTRAMDVVFGLLAFLFLFVLADKLHFPIIRRLMLHVVNVAAIVVFIIFQP EIRLALSRVRFHGRKFVIDLQDQFIEHLTSCIYQMSERQIGALVVLENKDSFDEFLSFSSVKINADFSEELLETIFEPSS PLHDGAVILRAETIAYARVVLPLAQDTTQLSRSMGTRHRAALGASQRTDALIIIVSEENGCVSLSRDGILTRGVKMDRFK AVLRSILTLKEQKHKPFSSWIWKK >Mature_263_residues PIDITYYTTPLLEIVLIWVVLNYLLKFFWGTRAMDVVFGLLAFLFLFVLADKLHFPIIRRLMLHVVNVAAIVVFIIFQPE IRLALSRVRFHGRKFVIDLQDQFIEHLTSCIYQMSERQIGALVVLENKDSFDEFLSFSSVKINADFSEELLETIFEPSSP LHDGAVILRAETIAYARVVLPLAQDTTQLSRSMGTRHRAALGASQRTDALIIIVSEENGCVSLSRDGILTRGVKMDRFKA VLRSILTLKEQKHKPFSSWIWKK
Specific function: Unknown
COG id: COG1624
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014046 - InterPro: IPR003390 [H]
Pfam domain/function: PF02457 DisA_N [H]
EC number: NA
Molecular weight: Translated: 30258; Mature: 30127
Theoretical pI: Translated: 9.09; Mature: 9.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIDITYYTTPLLEIVLIWVVLNYLLKFFWGTRAMDVVFGLLAFLFLFVLADKLHFPIIR CCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLMLHVVNVAAIVVFIIFQPEIRLALSRVRFHGRKFVIDLQDQFIEHLTSCIYQMSERQI HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHCCCC GALVVLENKDSFDEFLSFSSVKINADFSEELLETIFEPSSPLHDGAVILRAETIAYARVV CEEEEEECCCCHHHHHCCCCEEECCCHHHHHHHHHHCCCCCCCCCEEEEEEHHHHHHHHH LPLAQDTTQLSRSMGTRHRAALGASQRTDALIIIVSEENGCVSLSRDGILTRGVKMDRFK HHHHHHHHHHHHHHCHHHHHHHCCCCCCCEEEEEEECCCCEEEECCCCCHHCCCCHHHHH AVLRSILTLKEQKHKPFSSWIWKK HHHHHHHHHHHHCCCCHHHHCCCC >Mature Secondary Structure PIDITYYTTPLLEIVLIWVVLNYLLKFFWGTRAMDVVFGLLAFLFLFVLADKLHFPIIR CEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLMLHVVNVAAIVVFIIFQPEIRLALSRVRFHGRKFVIDLQDQFIEHLTSCIYQMSERQI HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHCCCC GALVVLENKDSFDEFLSFSSVKINADFSEELLETIFEPSSPLHDGAVILRAETIAYARVV CEEEEEECCCCHHHHHCCCCEEECCCHHHHHHHHHHCCCCCCCCCEEEEEEHHHHHHHHH LPLAQDTTQLSRSMGTRHRAALGASQRTDALIIIVSEENGCVSLSRDGILTRGVKMDRFK HHHHHHHHHHHHHHCHHHHHHHCCCCCCCEEEEEEECCCCEEEECCCCCHHCCCCHHHHH AVLRSILTLKEQKHKPFSSWIWKK HHHHHHHHHHHHCCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9274029; 9384377 [H]