Definition Chlamydophila abortus S26/3, complete genome.
Accession NC_004552
Length 1,144,377

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The map label for this gene is ybbP [H]

Identifier: 62185255

GI number: 62185255

Start: 738793

End: 739587

Strand: Direct

Name: ybbP [H]

Synonym: CAB642

Alternate gene names: 62185255

Gene position: 738793-739587 (Clockwise)

Preceding gene: 62185251

Following gene: 62185256

Centisome position: 64.56

GC content: 38.99

Gene sequence:

>795_bases
ATGCCCATAGATATTACTTACTATACAACACCCTTATTAGAGATTGTTCTGATTTGGGTAGTATTAAATTATCTTTTAAA
GTTCTTTTGGGGAACTCGAGCCATGGACGTTGTCTTTGGTTTGCTAGCCTTTCTATTTCTCTTTGTTCTTGCAGACAAAC
TACATTTTCCCATTATTCGACGATTGATGCTACATGTCGTTAATGTTGCTGCTATTGTCGTTTTTATTATTTTCCAGCCA
GAAATACGGCTGGCTTTATCTCGTGTACGCTTTCATGGGAGAAAGTTTGTCATTGATTTACAGGATCAATTTATTGAGCA
TCTGACTTCATGCATTTATCAAATGTCAGAAAGACAAATTGGCGCTCTTGTTGTTCTAGAAAATAAAGATTCTTTCGATG
AATTCTTAAGCTTTTCTTCCGTAAAAATTAATGCGGACTTTTCAGAAGAACTTCTAGAAACAATTTTTGAGCCTTCTTCT
CCTCTGCATGATGGAGCTGTAATCCTCAGAGCAGAAACCATAGCCTATGCTCGTGTTGTTCTTCCCCTAGCACAAGATAC
AACACAGTTATCTCGTTCTATGGGGACTCGTCACCGCGCGGCGTTAGGGGCCAGCCAACGTACCGATGCATTGATCATCA
TTGTCTCTGAAGAGAATGGTTGTGTATCCTTATCTCGCGATGGCATTTTGACTCGTGGAGTCAAGATGGATAGATTTAAA
GCTGTGCTGAGAAGTATCCTTACTCTCAAAGAACAAAAACATAAACCCTTTAGCTCATGGATTTGGAAAAAATGA

Upstream 100 bases:

>100_bases
CTCTATATGCTACAGTAGTATATTACCTTCTTTATAGAAAGCAGTCCATTGCCATTAAGGTGAGAATCTCTCCGAGTATT
CTTAAGAAACTAGTAAAGCT

Downstream 100 bases:

>100_bases
TCGATTTCTTTTCTCGTTTTTTCATTCGTAATTGGCTGAGGAAAGTGGTGTCTTTGGGCTTTGCCATCATCATTTGGGTT
CTCGTTGGGCAGACAGTAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 264; Mature: 263

Protein sequence:

>264_residues
MPIDITYYTTPLLEIVLIWVVLNYLLKFFWGTRAMDVVFGLLAFLFLFVLADKLHFPIIRRLMLHVVNVAAIVVFIIFQP
EIRLALSRVRFHGRKFVIDLQDQFIEHLTSCIYQMSERQIGALVVLENKDSFDEFLSFSSVKINADFSEELLETIFEPSS
PLHDGAVILRAETIAYARVVLPLAQDTTQLSRSMGTRHRAALGASQRTDALIIIVSEENGCVSLSRDGILTRGVKMDRFK
AVLRSILTLKEQKHKPFSSWIWKK

Sequences:

>Translated_264_residues
MPIDITYYTTPLLEIVLIWVVLNYLLKFFWGTRAMDVVFGLLAFLFLFVLADKLHFPIIRRLMLHVVNVAAIVVFIIFQP
EIRLALSRVRFHGRKFVIDLQDQFIEHLTSCIYQMSERQIGALVVLENKDSFDEFLSFSSVKINADFSEELLETIFEPSS
PLHDGAVILRAETIAYARVVLPLAQDTTQLSRSMGTRHRAALGASQRTDALIIIVSEENGCVSLSRDGILTRGVKMDRFK
AVLRSILTLKEQKHKPFSSWIWKK
>Mature_263_residues
PIDITYYTTPLLEIVLIWVVLNYLLKFFWGTRAMDVVFGLLAFLFLFVLADKLHFPIIRRLMLHVVNVAAIVVFIIFQPE
IRLALSRVRFHGRKFVIDLQDQFIEHLTSCIYQMSERQIGALVVLENKDSFDEFLSFSSVKINADFSEELLETIFEPSSP
LHDGAVILRAETIAYARVVLPLAQDTTQLSRSMGTRHRAALGASQRTDALIIIVSEENGCVSLSRDGILTRGVKMDRFKA
VLRSILTLKEQKHKPFSSWIWKK

Specific function: Unknown

COG id: COG1624

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014046
- InterPro:   IPR003390 [H]

Pfam domain/function: PF02457 DisA_N [H]

EC number: NA

Molecular weight: Translated: 30258; Mature: 30127

Theoretical pI: Translated: 9.09; Mature: 9.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPIDITYYTTPLLEIVLIWVVLNYLLKFFWGTRAMDVVFGLLAFLFLFVLADKLHFPIIR
CCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLMLHVVNVAAIVVFIIFQPEIRLALSRVRFHGRKFVIDLQDQFIEHLTSCIYQMSERQI
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHCCCC
GALVVLENKDSFDEFLSFSSVKINADFSEELLETIFEPSSPLHDGAVILRAETIAYARVV
CEEEEEECCCCHHHHHCCCCEEECCCHHHHHHHHHHCCCCCCCCCEEEEEEHHHHHHHHH
LPLAQDTTQLSRSMGTRHRAALGASQRTDALIIIVSEENGCVSLSRDGILTRGVKMDRFK
HHHHHHHHHHHHHHCHHHHHHHCCCCCCCEEEEEEECCCCEEEECCCCCHHCCCCHHHHH
AVLRSILTLKEQKHKPFSSWIWKK
HHHHHHHHHHHHCCCCHHHHCCCC
>Mature Secondary Structure 
PIDITYYTTPLLEIVLIWVVLNYLLKFFWGTRAMDVVFGLLAFLFLFVLADKLHFPIIR
CEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLMLHVVNVAAIVVFIIFQPEIRLALSRVRFHGRKFVIDLQDQFIEHLTSCIYQMSERQI
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHCCCC
GALVVLENKDSFDEFLSFSSVKINADFSEELLETIFEPSSPLHDGAVILRAETIAYARVV
CEEEEEECCCCHHHHHCCCCEEECCCHHHHHHHHHHCCCCCCCCCEEEEEEHHHHHHHHH
LPLAQDTTQLSRSMGTRHRAALGASQRTDALIIIVSEENGCVSLSRDGILTRGVKMDRFK
HHHHHHHHHHHHHHCHHHHHHHCCCCCCCEEEEEEECCCCEEEECCCCCHHCCCCHHHHH
AVLRSILTLKEQKHKPFSSWIWKK
HHHHHHHHHHHHCCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9274029; 9384377 [H]