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The map label for this gene is oppA [H]

Identifier: 62185190

GI number: 62185190

Start: 651242

End: 652834

Strand: Direct

Name: oppA [H]

Synonym: CAB574

Alternate gene names: 62185190

Gene position: 651242-652834 (Clockwise)

Preceding gene: 62185189

Following gene: 62185191

Centisome position: 56.91

GC content: 40.8

Gene sequence:

>1593_bases
ATGCACAAATTCCTAACCCCCATTCTATCGGTTATTCTATTTCTGGGAATTTCATCGCTATGCACAAGTTGCTATAGACA
TACTTCTAAACACCAGAACTCTCTAAAAATAGCGATGAGCCACGATCCTATGTCTTTAGACCCGAGAAGTGCTTGCCTAA
GTAAAGATATCTCTATAGCCCAAGCTCTCTATGAAGGTCTTGTGAGGGAACGTTCTGCAGGTCCTGAGCTCGCTCTTGCA
CAGTATTACACAGTATCCAACGACCAAACAGTCTATACTTTTTATCTTAAAGAGGCTTCATGGAGTAATGGAGATCCTGT
AACTGCTTATGATTTCGAAGAATCCATAAAACAAATTCATAAGCTCGAAGTGGCTTGCTCATCAAATTTTCTTCTCAGTG
TGATTAAAAATTCGCATGCTGTGATGAGTAAACAGATGCCTGTGGACACCTTGGGAATTCGCGCAGTCAATGCATCGCAA
TTGGAAATTACCCTAGAAAAACCTCTTCCCCACTTTTTAGAGATTCTTGCCTATCCGATTTTCTTCCCTGTCCACAAATC
CCTCAGGGAATTTTCTGCCTCAAGAGGAACCAAACTCCCTAATATCACAAATGGCCCTTTTCTCATTGAAGATTACCAAC
CTCAAAACAAACTGATCATTAAGAAAAATCCCCTGTATCACGATAAACACGCGGTGCATCTCGATACCATCACTTTCCAA
ATTGTACCGGACACACATACAGCCACACAACTTCTGCAAAAAAATCTCATTGACTGGGTGGGTTCCCCATGGAGTTCTCC
CATTTCTAAAGAAGACCAACACCATATCCCGAAAGATAAGTTGCACAATTACCCCGTGCTAGGAACAACAGCTCTCATAT
GTAACCTAAAACATAGCCCAACGAATAGCTTAGCACTACGCAAAGCCCTCGCCTATGCCATTGATAAAACTACCTTACTG
CAGTTTATCAGCCATGGAAAGGTCGCCGAACATTTCCTACCGCCAGAACTCTCACAACTCCCTAAACAATCTTATCAATC
ACCAGAAGAACGTAAAGAATTAGCACGCGCGTATTTTAAAGAAGCTGAAAAAGAACTGTCACCCAAATGTATCGCAGAAT
TATTGATCATTTATCCTTTGGAATCTGCATGTCTGAACGCTATTGTTCAAGAGATACAACAGCAAATCAAAAACGTTCTA
GGGATTCATGTCCCTATCCAAGGCATGGAATATCATTGCTTTTTAGATAAAAGACGTCGCGGAGACTTTACCCTAGCTAC
CGGAAGATGGATAGCAGACTATCCAAGGCCAACATCGTTCCTTTCCATCCTCGGCAATCTTAAAAATGACGAGCCAACAA
AGTCACTAACAAAATGGGAAAATACCCAATACAATCGTATCCTAACGACTTTACTTTCAAAAGATGAAACAATGAAAGAT
CAAATCATCGCTGAAGAGCTCATCGAAGAAGATCTTCCTATTATTCCTCTTTACCATTTTGAATATACTTACGCAGCTAA
CCCTAAAATTCAAAACTCCTACACCTCATTGCTCGGACATATCGACCTGAAAGAAGCAGAGATTTCAAAATAA

Upstream 100 bases:

>100_bases
TGATAGAGCGACTCTAATTACACAATTGGGTAAAATAAAAACCGATTGTGAAAACCTCGGGTAAGCATCCAACATGCTTT
TTAAATAGACGACAAAAACA

Downstream 100 bases:

>100_bases
TATGTACTTCGTATAGGTGGAAAAAAACATCTTGGGTTTGGACTTAAGTCAAACAAAATATTGACTTAAACTTGAAAAAA
AATACCTTAACAGCAACTCT

Product: putative peptide ABC transporter substrate-binding component

Products: NA

Alternate protein names: Stage 0 sporulation protein KA [H]

Number of amino acids: Translated: 530; Mature: 530

Protein sequence:

>530_residues
MHKFLTPILSVILFLGISSLCTSCYRHTSKHQNSLKIAMSHDPMSLDPRSACLSKDISIAQALYEGLVRERSAGPELALA
QYYTVSNDQTVYTFYLKEASWSNGDPVTAYDFEESIKQIHKLEVACSSNFLLSVIKNSHAVMSKQMPVDTLGIRAVNASQ
LEITLEKPLPHFLEILAYPIFFPVHKSLREFSASRGTKLPNITNGPFLIEDYQPQNKLIIKKNPLYHDKHAVHLDTITFQ
IVPDTHTATQLLQKNLIDWVGSPWSSPISKEDQHHIPKDKLHNYPVLGTTALICNLKHSPTNSLALRKALAYAIDKTTLL
QFISHGKVAEHFLPPELSQLPKQSYQSPEERKELARAYFKEAEKELSPKCIAELLIIYPLESACLNAIVQEIQQQIKNVL
GIHVPIQGMEYHCFLDKRRRGDFTLATGRWIADYPRPTSFLSILGNLKNDEPTKSLTKWENTQYNRILTTLLSKDETMKD
QIIAEELIEEDLPIIPLYHFEYTYAANPKIQNSYTSLLGHIDLKEAEISK

Sequences:

>Translated_530_residues
MHKFLTPILSVILFLGISSLCTSCYRHTSKHQNSLKIAMSHDPMSLDPRSACLSKDISIAQALYEGLVRERSAGPELALA
QYYTVSNDQTVYTFYLKEASWSNGDPVTAYDFEESIKQIHKLEVACSSNFLLSVIKNSHAVMSKQMPVDTLGIRAVNASQ
LEITLEKPLPHFLEILAYPIFFPVHKSLREFSASRGTKLPNITNGPFLIEDYQPQNKLIIKKNPLYHDKHAVHLDTITFQ
IVPDTHTATQLLQKNLIDWVGSPWSSPISKEDQHHIPKDKLHNYPVLGTTALICNLKHSPTNSLALRKALAYAIDKTTLL
QFISHGKVAEHFLPPELSQLPKQSYQSPEERKELARAYFKEAEKELSPKCIAELLIIYPLESACLNAIVQEIQQQIKNVL
GIHVPIQGMEYHCFLDKRRRGDFTLATGRWIADYPRPTSFLSILGNLKNDEPTKSLTKWENTQYNRILTTLLSKDETMKD
QIIAEELIEEDLPIIPLYHFEYTYAANPKIQNSYTSLLGHIDLKEAEISK
>Mature_530_residues
MHKFLTPILSVILFLGISSLCTSCYRHTSKHQNSLKIAMSHDPMSLDPRSACLSKDISIAQALYEGLVRERSAGPELALA
QYYTVSNDQTVYTFYLKEASWSNGDPVTAYDFEESIKQIHKLEVACSSNFLLSVIKNSHAVMSKQMPVDTLGIRAVNASQ
LEITLEKPLPHFLEILAYPIFFPVHKSLREFSASRGTKLPNITNGPFLIEDYQPQNKLIIKKNPLYHDKHAVHLDTITFQ
IVPDTHTATQLLQKNLIDWVGSPWSSPISKEDQHHIPKDKLHNYPVLGTTALICNLKHSPTNSLALRKALAYAIDKTTLL
QFISHGKVAEHFLPPELSQLPKQSYQSPEERKELARAYFKEAEKELSPKCIAELLIIYPLESACLNAIVQEIQQQIKNVL
GIHVPIQGMEYHCFLDKRRRGDFTLATGRWIADYPRPTSFLSILGNLKNDEPTKSLTKWENTQYNRILTTLLSKDETMKD
QIIAEELIEEDLPIIPLYHFEYTYAANPKIQNSYTSLLGHIDLKEAEISK

Specific function: This protein is a component of the oligopeptide permease, a binding protein-dependent transport system, It binds peptides up to five amino acids long with high affinity. Also required for sporulation and competence [H]

COG id: COG4166

COG function: function code E; ABC-type oligopeptide transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 5 family [H]

Homologues:

Organism=Escherichia coli, GI87081878, Length=482, Percent_Identity=28.6307053941909, Blast_Score=167, Evalue=2e-42,
Organism=Escherichia coli, GI1789397, Length=474, Percent_Identity=28.2700421940928, Blast_Score=164, Evalue=2e-41,
Organism=Escherichia coli, GI1787495, Length=471, Percent_Identity=26.7515923566879, Blast_Score=150, Evalue=2e-37,
Organism=Escherichia coli, GI1787762, Length=502, Percent_Identity=22.9083665338645, Blast_Score=103, Evalue=3e-23,
Organism=Escherichia coli, GI1789887, Length=405, Percent_Identity=25.4320987654321, Blast_Score=81, Evalue=2e-16,
Organism=Escherichia coli, GI1787052, Length=506, Percent_Identity=24.3083003952569, Blast_Score=79, Evalue=6e-16,
Organism=Escherichia coli, GI1789966, Length=480, Percent_Identity=22.9166666666667, Blast_Score=79, Evalue=7e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 60217; Mature: 60217

Theoretical pI: Translated: 7.23; Mature: 7.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHKFLTPILSVILFLGISSLCTSCYRHTSKHQNSLKIAMSHDPMSLDPRSACLSKDISIA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHCCHHHH
QALYEGLVRERSAGPELALAQYYTVSNDQTVYTFYLKEASWSNGDPVTAYDFEESIKQIH
HHHHHHHHHHCCCCCCEEEEEEEEECCCCEEEEEEEEECCCCCCCCEEEECHHHHHHHHH
KLEVACSSNFLLSVIKNSHAVMSKQMPVDTLGIRAVNASQLEITLEKPLPHFLEILAYPI
HHHHHHCCHHHHHHHHCCHHHHHCCCCCHHHCEEEECCCEEEEEECCCCHHHHHHHHHHH
FFPVHKSLREFSASRGTKLPNITNGPFLIEDYQPQNKLIIKKNPLYHDKHAVHLDTITFQ
HHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCEEEECCCCCCCCCEEEEEEEEEE
IVPDTHTATQLLQKNLIDWVGSPWSSPISKEDQHHIPKDKLHNYPVLGTTALICNLKHSP
EECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHEEECCCCC
TNSLALRKALAYAIDKTTLLQFISHGKVAEHFLPPELSQLPKQSYQSPEERKELARAYFK
CHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHCCHHHCCCHHHHHHHHHHHHH
EAEKELSPKCIAELLIIYPLESACLNAIVQEIQQQIKNVLGIHVPIQGMEYHCFLDKRRR
HHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHEEEEEECCCEEEEEEECCCC
GDFTLATGRWIADYPRPTSFLSILGNLKNDEPTKSLTKWENTQYNRILTTLLSKDETMKD
CCEEEECCCEECCCCCHHHHHHHHHCCCCCCCHHHHHHHCCCHHHHHHHHHHCCCHHHHH
QIIAEELIEEDLPIIPLYHFEYTYAANPKIQNSYTSLLGHIDLKEAEISK
HHHHHHHHHCCCCEEEEEEEEEEEECCCCCHHHHHHHHHCCCCCHHCCCC
>Mature Secondary Structure
MHKFLTPILSVILFLGISSLCTSCYRHTSKHQNSLKIAMSHDPMSLDPRSACLSKDISIA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHCCHHHH
QALYEGLVRERSAGPELALAQYYTVSNDQTVYTFYLKEASWSNGDPVTAYDFEESIKQIH
HHHHHHHHHHCCCCCCEEEEEEEEECCCCEEEEEEEEECCCCCCCCEEEECHHHHHHHHH
KLEVACSSNFLLSVIKNSHAVMSKQMPVDTLGIRAVNASQLEITLEKPLPHFLEILAYPI
HHHHHHCCHHHHHHHHCCHHHHHCCCCCHHHCEEEECCCEEEEEECCCCHHHHHHHHHHH
FFPVHKSLREFSASRGTKLPNITNGPFLIEDYQPQNKLIIKKNPLYHDKHAVHLDTITFQ
HHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCEEEECCCCCCCCCEEEEEEEEEE
IVPDTHTATQLLQKNLIDWVGSPWSSPISKEDQHHIPKDKLHNYPVLGTTALICNLKHSP
EECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHEEECCCCC
TNSLALRKALAYAIDKTTLLQFISHGKVAEHFLPPELSQLPKQSYQSPEERKELARAYFK
CHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHCCHHHCCCHHHHHHHHHHHHH
EAEKELSPKCIAELLIIYPLESACLNAIVQEIQQQIKNVLGIHVPIQGMEYHCFLDKRRR
HHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHEEEEEECCCEEEEEEECCCC
GDFTLATGRWIADYPRPTSFLSILGNLKNDEPTKSLTKWENTQYNRILTTLLSKDETMKD
CCEEEECCCEECCCCCHHHHHHHHHCCCCCCCHHHHHHHCCCHHHHHHHHHHCCCHHHHH
QIIAEELIEEDLPIIPLYHFEYTYAANPKIQNSYTSLLGHIDLKEAEISK
HHHHHHHHHCCCCEEEEEEEEEEEECCCCCHHHHHHHHHCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1901616; 1899858; 9384377 [H]