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The map label for this gene is dppE [H]

Identifier: 62185189

GI number: 62185189

Start: 649430

End: 651037

Strand: Direct

Name: dppE [H]

Synonym: CAB573

Alternate gene names: 62185189

Gene position: 649430-651037 (Clockwise)

Preceding gene: 62185188

Following gene: 62185190

Centisome position: 56.75

GC content: 38.37

Gene sequence:

>1608_bases
GTGGTGCTCCGATTTAGCAAACATTATGCAATCTACTTCCTCTGTTTTTCTAGCTTGCTTCTCACGAGTTGCCATCATCA
ACAGTCTCCACAAAATGCTGGTCGGTGCTTGAGAATTGGCATATCGTATGATCCTGTTTCCATCGATCCTAGATGCACTT
ATCTTAAAAAAGACGTTTCCCTAGCCAAAGCCCTTTACGAAGGCTTAATTCGAGAATGCATTTCTCACGATCATGTGATC
CTAGGCATGGCGGAAACATATACAGTGTCTGACGAAGGCTATGTGTATACCTTCAAATTGAGAAATACATCATGGAGTAA
TGGCGATCCATTAACAGCTCACGATTTCGAAGAATCTATAAAACAAATCCACACGAAAAACCTCCCGATATCCTACCACA
ACCTTCTATACATTATCAAAAACTCTAAAGCAATTATGGAAGAGAGGTTACCTATAGAAAAATTAGGAGTTAAAGCTCTG
GATGAGAAAACATTAGAAATTACTCTAGAACATCCCTCGGAAAATTTCATTGAGATGGTCGCCCATCCGTTGTTTTTCCC
AGTCCACAGTTCTCTAAGAGAGCACTATGCCAATCCAAAAAACCCACCCACCTATATTTCTAATGGCCCTTTTCAATTGA
GTGATGTGCAACCGCAAAAACATCTGAAAATGCAAAAAAATATACACTACTACGATGCAGACAAAGTACAGATCGATACT
CTAGTCTTTACCATCATGTCAGACTCTCATACTGCAGCAAAATGCTTTAAAAATAACCTGATTGATGTTTTAGGCAATCC
CTGGATAGCAAAAATCCCGCAAGAAATATTAAACAATACACCTAAAGAGATCACTCACGTTTATCCAGTTTGCTCAACTT
CTATATTGATCTATAACCTCAACATGCCTGTACTACAAAATAAAGCTCTAAGGAAAGCTTTAGCCTATGCTATTGACAAG
GAATCCCTCCTGCCTCTACTCAATGCAGCCAGAGTTGCCCACTCTTTTTTACCTCCGGAATTATCTGAAATCCACAATCA
AAAAGTACTCAGCAAAGAACAACGAGAAAAAAAAGCCCGAGAATACTTTGAAGAAGCAAAATCTACTCTATCAGAAAAAG
AACTCGCTGAACTCTCTCTTATTTACCCTCAAGAATCCAGCGTTTTTTCGTTCGTAGTTCAAGAACTACAACAACAATTT
AAAAATGTTCTCGGTATACACATACCCATTCAAGGGGTTGAGTACTTTTATTTTTTAGAAAAAAGAAATAAAGGAGATTT
TTATCTATCCGTAGGAGGATGGATTGCAGAATATCTCCATGCTAGAAATTTCCTTACTATCCTGGGGAACCCAGAAAATG
CAGAGACAAGCCATCAATTAGGAAAATGGAATAATCAGCAGTTTAATAAAATCTTAGAAAAGTACCATACGGCAACGTTC
ACTAAGAGAGATCAAATCCTAGCTGAAGAACTTATCGAAGAAGATCTTCCCGTATTCCCTCTATACCATTTCAACTATAT
TTACATTGCCCATCCGCGAGTCAAAAACCTCAATATCTCCCCTTTAGGACATGTTGAACTGAAAGAAGTGGAAGTTCTTC
CTACGTGA

Upstream 100 bases:

>100_bases
CAACAGAAAATACAATTTTTTTCACAAATTCAAAAATTGGAAATTATTTTTTTAATCAGTAATCTAACTCCAACTGACTA
TTTAACTTGAGGACAATCCT

Downstream 100 bases:

>100_bases
CACAACCTCTAAAAACTTTTTACAAAATGATAACGATGTCTTACAAACTAAAATATATTTAATATAAACACCTAGTTTTA
AGATATTTAATCAGATGATT

Product: putative ABC transporter peptide periplasmic-binding lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 535; Mature: 535

Protein sequence:

>535_residues
MVLRFSKHYAIYFLCFSSLLLTSCHHQQSPQNAGRCLRIGISYDPVSIDPRCTYLKKDVSLAKALYEGLIRECISHDHVI
LGMAETYTVSDEGYVYTFKLRNTSWSNGDPLTAHDFEESIKQIHTKNLPISYHNLLYIIKNSKAIMEERLPIEKLGVKAL
DEKTLEITLEHPSENFIEMVAHPLFFPVHSSLREHYANPKNPPTYISNGPFQLSDVQPQKHLKMQKNIHYYDADKVQIDT
LVFTIMSDSHTAAKCFKNNLIDVLGNPWIAKIPQEILNNTPKEITHVYPVCSTSILIYNLNMPVLQNKALRKALAYAIDK
ESLLPLLNAARVAHSFLPPELSEIHNQKVLSKEQREKKAREYFEEAKSTLSEKELAELSLIYPQESSVFSFVVQELQQQF
KNVLGIHIPIQGVEYFYFLEKRNKGDFYLSVGGWIAEYLHARNFLTILGNPENAETSHQLGKWNNQQFNKILEKYHTATF
TKRDQILAEELIEEDLPVFPLYHFNYIYIAHPRVKNLNISPLGHVELKEVEVLPT

Sequences:

>Translated_535_residues
MVLRFSKHYAIYFLCFSSLLLTSCHHQQSPQNAGRCLRIGISYDPVSIDPRCTYLKKDVSLAKALYEGLIRECISHDHVI
LGMAETYTVSDEGYVYTFKLRNTSWSNGDPLTAHDFEESIKQIHTKNLPISYHNLLYIIKNSKAIMEERLPIEKLGVKAL
DEKTLEITLEHPSENFIEMVAHPLFFPVHSSLREHYANPKNPPTYISNGPFQLSDVQPQKHLKMQKNIHYYDADKVQIDT
LVFTIMSDSHTAAKCFKNNLIDVLGNPWIAKIPQEILNNTPKEITHVYPVCSTSILIYNLNMPVLQNKALRKALAYAIDK
ESLLPLLNAARVAHSFLPPELSEIHNQKVLSKEQREKKAREYFEEAKSTLSEKELAELSLIYPQESSVFSFVVQELQQQF
KNVLGIHIPIQGVEYFYFLEKRNKGDFYLSVGGWIAEYLHARNFLTILGNPENAETSHQLGKWNNQQFNKILEKYHTATF
TKRDQILAEELIEEDLPVFPLYHFNYIYIAHPRVKNLNISPLGHVELKEVEVLPT
>Mature_535_residues
MVLRFSKHYAIYFLCFSSLLLTSCHHQQSPQNAGRCLRIGISYDPVSIDPRCTYLKKDVSLAKALYEGLIRECISHDHVI
LGMAETYTVSDEGYVYTFKLRNTSWSNGDPLTAHDFEESIKQIHTKNLPISYHNLLYIIKNSKAIMEERLPIEKLGVKAL
DEKTLEITLEHPSENFIEMVAHPLFFPVHSSLREHYANPKNPPTYISNGPFQLSDVQPQKHLKMQKNIHYYDADKVQIDT
LVFTIMSDSHTAAKCFKNNLIDVLGNPWIAKIPQEILNNTPKEITHVYPVCSTSILIYNLNMPVLQNKALRKALAYAIDK
ESLLPLLNAARVAHSFLPPELSEIHNQKVLSKEQREKKAREYFEEAKSTLSEKELAELSLIYPQESSVFSFVVQELQQQF
KNVLGIHIPIQGVEYFYFLEKRNKGDFYLSVGGWIAEYLHARNFLTILGNPENAETSHQLGKWNNQQFNKILEKYHTATF
TKRDQILAEELIEEDLPVFPLYHFNYIYIAHPRVKNLNISPLGHVELKEVEVLPT

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the binding of dipeptides with high affinity. Is expressed to facilitate adaptation to nutrient deficiency conditions, which also induce sporulation [H]

COG id: COG4166

COG function: function code E; ABC-type oligopeptide transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 5 family [H]

Homologues:

Organism=Escherichia coli, GI1789397, Length=504, Percent_Identity=26.7857142857143, Blast_Score=158, Evalue=9e-40,
Organism=Escherichia coli, GI87081878, Length=495, Percent_Identity=25.0505050505051, Blast_Score=154, Evalue=2e-38,
Organism=Escherichia coli, GI1787495, Length=486, Percent_Identity=25.3086419753086, Blast_Score=145, Evalue=8e-36,
Organism=Escherichia coli, GI1789966, Length=500, Percent_Identity=23.2, Blast_Score=92, Evalue=9e-20,
Organism=Escherichia coli, GI1787762, Length=503, Percent_Identity=21.272365805169, Blast_Score=84, Evalue=3e-17,
Organism=Escherichia coli, GI1789887, Length=483, Percent_Identity=23.8095238095238, Blast_Score=78, Evalue=2e-15,
Organism=Escherichia coli, GI1787052, Length=364, Percent_Identity=24.7252747252747, Blast_Score=77, Evalue=3e-15,
Organism=Escherichia coli, GI1787551, Length=509, Percent_Identity=22.3968565815324, Blast_Score=71, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 61684; Mature: 61684

Theoretical pI: Translated: 6.98; Mature: 6.98

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLRFSKHYAIYFLCFSSLLLTSCHHQQSPQNAGRCLRIGISYDPVSIDPRCTYLKKDVS
CEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHH
LAKALYEGLIRECISHDHVILGMAETYTVSDEGYVYTFKLRNTSWSNGDPLTAHDFEESI
HHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCEEEEEEEECCCCCCCCCCCHHHHHHHH
KQIHTKNLPISYHNLLYIIKNSKAIMEERLPIEKLGVKALDEKTLEITLEHPSENFIEMV
HHHHHCCCCEEEEEEEEEEECCHHHHHHCCCHHHHCCHHHCCCEEEEEEECCCHHHHHHH
AHPLFFPVHSSLREHYANPKNPPTYISNGPFQLSDVQPQKHLKMQKNIHYYDADKVQIDT
HHHHHHHHHHHHHHHCCCCCCCCCEECCCCEEECCCCHHHHHHHHHCCEEECCCCEEEEE
LVFTIMSDSHTAAKCFKNNLIDVLGNPWIAKIPQEILNNTPKEITHVYPVCSTSILIYNL
EEEEEECCCCHHHHHHHHCHHHHHCCCHHHHHHHHHHCCCCHHHHHHHCCCCCEEEEEEC
NMPVLQNKALRKALAYAIDKESLLPLLNAARVAHSFLPPELSEIHNQKVLSKEQREKKAR
CCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
EYFEEAKSTLSEKELAELSLIYPQESSVFSFVVQELQQQFKNVLGIHIPIQGVEYFYFLE
HHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHCEEEEEECCCEEEEEEE
KRNKGDFYLSVGGWIAEYLHARNFLTILGNPENAETSHQLGKWNNQQFNKILEKYHTATF
ECCCCCEEEEEHHHHHHHHHHCCEEEEECCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHH
TKRDQILAEELIEEDLPVFPLYHFNYIYIAHPRVKNLNISPLGHVELKEVEVLPT
HHHHHHHHHHHHHCCCCCCEEEECCEEEEECCCCCCCCCCCCCCCEEEEEEECCC
>Mature Secondary Structure
MVLRFSKHYAIYFLCFSSLLLTSCHHQQSPQNAGRCLRIGISYDPVSIDPRCTYLKKDVS
CEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHH
LAKALYEGLIRECISHDHVILGMAETYTVSDEGYVYTFKLRNTSWSNGDPLTAHDFEESI
HHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCEEEEEEEECCCCCCCCCCCHHHHHHHH
KQIHTKNLPISYHNLLYIIKNSKAIMEERLPIEKLGVKALDEKTLEITLEHPSENFIEMV
HHHHHCCCCEEEEEEEEEEECCHHHHHHCCCHHHHCCHHHCCCEEEEEEECCCHHHHHHH
AHPLFFPVHSSLREHYANPKNPPTYISNGPFQLSDVQPQKHLKMQKNIHYYDADKVQIDT
HHHHHHHHHHHHHHHCCCCCCCCCEECCCCEEECCCCHHHHHHHHHCCEEECCCCEEEEE
LVFTIMSDSHTAAKCFKNNLIDVLGNPWIAKIPQEILNNTPKEITHVYPVCSTSILIYNL
EEEEEECCCCHHHHHHHHCHHHHHCCCHHHHHHHHHHCCCCHHHHHHHCCCCCEEEEEEC
NMPVLQNKALRKALAYAIDKESLLPLLNAARVAHSFLPPELSEIHNQKVLSKEQREKKAR
CCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
EYFEEAKSTLSEKELAELSLIYPQESSVFSFVVQELQQQFKNVLGIHIPIQGVEYFYFLE
HHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHCEEEEEECCCEEEEEEE
KRNKGDFYLSVGGWIAEYLHARNFLTILGNPENAETSHQLGKWNNQQFNKILEKYHTATF
ECCCCCEEEEEHHHHHHHHHHCCEEEEECCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHH
TKRDQILAEELIEEDLPVFPLYHFNYIYIAHPRVKNLNISPLGHVELKEVEVLPT
HHHHHHHHHHHHHCCCCCCEEEECCEEEEECCCCCCCCCCCCCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1766370; 9384377 [H]