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The map label for this gene is 59711526

Identifier: 59711526

GI number: 59711526

Start: 1015163

End: 1015834

Strand: Reverse

Name: 59711526

Synonym: VF_0919

Alternate gene names: NA

Gene position: 1015834-1015163 (Counterclockwise)

Preceding gene: 59711527

Following gene: 59711524

Centisome position: 35.06

GC content: 36.01

Gene sequence:

>672_bases
ATGCAAATAAAACATTCAACCATACTGATCACATCAGCTGGAAATGTTATGGGTCGTTCCATTTCATGTCATTTCGCTTC
TCTTGGCGCTTATTTAATCATTACAGATTCTGATGCAGAAGCGTTAAATGAAACGCATCGTTTTTGCAGTCAATTAACAT
CCAATATTGTCAGCTATCAACTAGAAGACCAAAGCCAAGAAAGTATTCGCCATTTGTTTCATGCCATCGATAATGAGTTT
AATAACGGCATAGATGTGCTAATCAATAACTATACTGCTGTGACGTTACCAAGCTTGCTGGATTCTCAAAATCAAAATAG
TCCATTCCAACTCACAGAGTTAGCAACAACTTTATTCACCTATGGTCAATTTGCCGCTCAAAATATGCGTTCTCATAAGA
AAGAAGGCGTAATTATTAACCTTGGTTATCACAATGACTTATCGCATTTGCACCAAGCAGATAACTCAACAGCTCTTTTA
GCAGGGTTAACTAAGAGTTGGGCTAAAGAGCTAAATCCATTCAAAATAAGAATTGGTGGTGTGACACCAAGAATAACAAA
TAATGATACTGCGCCTAATCTAAGTACCATCAATCAAGAACTAATAAAAAACACTGAATACATTCTTGCTAATGAGTATT
TTAGTGGTCGAATTATTGAAGCAACAGCTTAA

Upstream 100 bases:

>100_bases
TAAAGCCCATCTCACAGCAGATGTCATATTTCTATTCCATTATTAAAGCATCGAGTAACTAACGCTATTAAAGCAATTCA
TGCTCTAAGGAAAGAATGCT

Downstream 100 bases:

>100_bases
TAATTTAATACCAATCTGAATAAGCAGTGAGATGAATGGTCAGGTACTTATTTAAATTAGTATTATCAGTTCAATAAACA
TTTTTAAACACAAACCTCTA

Product: short chain dehydrogenase

Products: NA

Alternate protein names: Short Chain Dehydrogenase; 3-Oxoacyl-(Acyl-Carrier-Protein) Reductase; 3-Hydroxyacyl-CoA Dehydrogenase; Oxidoreductase Short-Chain Dehydrogenase/Reductase Family

Number of amino acids: Translated: 223; Mature: 223

Protein sequence:

>223_residues
MQIKHSTILITSAGNVMGRSISCHFASLGAYLIITDSDAEALNETHRFCSQLTSNIVSYQLEDQSQESIRHLFHAIDNEF
NNGIDVLINNYTAVTLPSLLDSQNQNSPFQLTELATTLFTYGQFAAQNMRSHKKEGVIINLGYHNDLSHLHQADNSTALL
AGLTKSWAKELNPFKIRIGGVTPRITNNDTAPNLSTINQELIKNTEYILANEYFSGRIIEATA

Sequences:

>Translated_223_residues
MQIKHSTILITSAGNVMGRSISCHFASLGAYLIITDSDAEALNETHRFCSQLTSNIVSYQLEDQSQESIRHLFHAIDNEF
NNGIDVLINNYTAVTLPSLLDSQNQNSPFQLTELATTLFTYGQFAAQNMRSHKKEGVIINLGYHNDLSHLHQADNSTALL
AGLTKSWAKELNPFKIRIGGVTPRITNNDTAPNLSTINQELIKNTEYILANEYFSGRIIEATA
>Mature_223_residues
MQIKHSTILITSAGNVMGRSISCHFASLGAYLIITDSDAEALNETHRFCSQLTSNIVSYQLEDQSQESIRHLFHAIDNEF
NNGIDVLINNYTAVTLPSLLDSQNQNSPFQLTELATTLFTYGQFAAQNMRSHKKEGVIINLGYHNDLSHLHQADNSTALL
AGLTKSWAKELNPFKIRIGGVTPRITNNDTAPNLSTINQELIKNTEYILANEYFSGRIIEATA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24757; Mature: 24757

Theoretical pI: Translated: 6.01; Mature: 6.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQIKHSTILITSAGNVMGRSISCHFASLGAYLIITDSDAEALNETHRFCSQLTSNIVSYQ
CCCCCEEEEEEECCCHHCCEEEEEEECCCEEEEEECCCHHHHHHHHHHHHHHHHHHHEEE
LEDQSQESIRHLFHAIDNEFNNGIDVLINNYTAVTLPSLLDSQNQNSPFQLTELATTLFT
ECCCHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEHHHHHCCCCCCCCCHHHHHHHHHHH
YGQFAAQNMRSHKKEGVIINLGYHNDLSHLHQADNSTALLAGLTKSWAKELNPFKIRIGG
HHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEEECC
VTPRITNNDTAPNLSTINQELIKNTEYILANEYFSGRIIEATA
CCCCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCEEEEECC
>Mature Secondary Structure
MQIKHSTILITSAGNVMGRSISCHFASLGAYLIITDSDAEALNETHRFCSQLTSNIVSYQ
CCCCCEEEEEEECCCHHCCEEEEEEECCCEEEEEECCCHHHHHHHHHHHHHHHHHHHEEE
LEDQSQESIRHLFHAIDNEFNNGIDVLINNYTAVTLPSLLDSQNQNSPFQLTELATTLFT
ECCCHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEHHHHHCCCCCCCCCHHHHHHHHHHH
YGQFAAQNMRSHKKEGVIINLGYHNDLSHLHQADNSTALLAGLTKSWAKELNPFKIRIGG
HHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEEECC
VTPRITNNDTAPNLSTINQELIKNTEYILANEYFSGRIIEATA
CCCCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA