BacMap

Definition	Vibrio fischeri ES114 chromosome I, complete genome.
Accession	NC_006840
Length	2,897,536

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The map label for this gene is 59711524

Identifier: 59711524

GI number: 59711524

Start: 1010856

End: 1011716

Strand: Reverse

Name: 59711524

Synonym: VF_0917

Alternate gene names: NA

Gene position: 1011716-1010856 (Counterclockwise)

Preceding gene: 59711526

Following gene: 59711522

Centisome position: 34.92

GC content: 36.0

Gene sequence:

>861_bases
ATGACAAAAACAAGAAAAAGCCCAATAAAACATCATCTATATACAATCATCTTTGGTACCCATACTAAAGGTGGCAGAAG
GTTTGATATCGCCTTAATTATTTTAATCTTATTATCACAAGCAACTTTGATATTAGATTCTATAAGCTCTGTACGTTTAC
AGTATGGAGAAGTATTATGGAAGCTTGAGTATTTATTTACAGCTATCTTCACACTTGAGTATGTTTTGCGTCTTTATTGC
TCTCCACGACCAAGCTCTTATGCAAAAAGCTTCTATGGCATTATTGATTTATTAGCAATATTACCTACATACCTAGCTCT
CTTCTTCCCTAGCGCTAGCTATATAGCTATTATTCGTTTGCTTCGAGTAATGCGTATTTTCCGAATTTTGAAACTTGTTC
GTTACTTGCAAGATTCAAATATTCTATTGCGCTCACTCTTAATGGCCAAACGCAAAATACTCATATTTTTTAGTACCGTT
GCGATTCTTGTTTCTGTTTTTGGTTCATTAATGTTTGTAATTGAAGGGCCGGAGAATGGATTTACAAGTATTCCACAAAG
TATCTACTGGGCTATAGTAACAATTACTACTGTAGGATATGGTGATTTAGTTCCTCACACCCCACTCGGTAAAGCAATCG
CCTCTTTAACTATGCTATTAGGTTACTCGATACTTGCTGTACCAACGGGGATCATTACTGCGGAATTAAATCAAGAGATG
AATACTCACAGAGATCTTGTTCGTTGTCCTAATTGTTTGAAAGGTGGACATGAGTCAGACGCAATACACTGTAAGCATTG
CGGAAGTCGGTTACCAGAACCAGACAAGAGAATTGTGAATACTATTAATGCAAAAGAATAA

Upstream 100 bases:

>100_bases
TTAAAAAGATAGGATTAGAAATTGATTAAAAGAAATACTAGAGAGGTCAGAGTTTTTTGATTATTCTTGGTGCACAGCAA
TAGCTTATAAATACAGATAA

Downstream 100 bases:

>100_bases
TAGTACTCATTTTAAAAGACGCTATTCAGTGTATAAACTTAACGAACTTTTCGACGCATGAGCATCAGAATCACTACCAA
GGAACTTTGGTGCAGCAATT

Product: cation transporter, voltage-gated ion channel cation transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 286; Mature: 285

Protein sequence:

>286_residues
MTKTRKSPIKHHLYTIIFGTHTKGGRRFDIALIILILLSQATLILDSISSVRLQYGEVLWKLEYLFTAIFTLEYVLRLYC
SPRPSSYAKSFYGIIDLLAILPTYLALFFPSASYIAIIRLLRVMRIFRILKLVRYLQDSNILLRSLLMAKRKILIFFSTV
AILVSVFGSLMFVIEGPENGFTSIPQSIYWAIVTITTVGYGDLVPHTPLGKAIASLTMLLGYSILAVPTGIITAELNQEM
NTHRDLVRCPNCLKGGHESDAIHCKHCGSRLPEPDKRIVNTINAKE

Sequences:

>Translated_286_residues
MTKTRKSPIKHHLYTIIFGTHTKGGRRFDIALIILILLSQATLILDSISSVRLQYGEVLWKLEYLFTAIFTLEYVLRLYC
SPRPSSYAKSFYGIIDLLAILPTYLALFFPSASYIAIIRLLRVMRIFRILKLVRYLQDSNILLRSLLMAKRKILIFFSTV
AILVSVFGSLMFVIEGPENGFTSIPQSIYWAIVTITTVGYGDLVPHTPLGKAIASLTMLLGYSILAVPTGIITAELNQEM
NTHRDLVRCPNCLKGGHESDAIHCKHCGSRLPEPDKRIVNTINAKE
>Mature_285_residues
TKTRKSPIKHHLYTIIFGTHTKGGRRFDIALIILILLSQATLILDSISSVRLQYGEVLWKLEYLFTAIFTLEYVLRLYCS
PRPSSYAKSFYGIIDLLAILPTYLALFFPSASYIAIIRLLRVMRIFRILKLVRYLQDSNILLRSLLMAKRKILIFFSTVA
ILVSVFGSLMFVIEGPENGFTSIPQSIYWAIVTITTVGYGDLVPHTPLGKAIASLTMLLGYSILAVPTGIITAELNQEMN
THRDLVRCPNCLKGGHESDAIHCKHCGSRLPEPDKRIVNTINAKE

Specific function: Unknown

COG id: COG1226

COG function: function code P; Kef-type K+ transport systems, predicted NAD-binding component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 cyclic nucleotide-binding domain [H]

Homologues:

Organism=Homo sapiens, GI20070166, Length=228, Percent_Identity=34.6491228070175, Blast_Score=120, Evalue=1e-27,
Organism=Homo sapiens, GI27436974, Length=232, Percent_Identity=34.9137931034483, Blast_Score=118, Evalue=7e-27,
Organism=Homo sapiens, GI4826784, Length=229, Percent_Identity=34.4978165938865, Blast_Score=114, Evalue=1e-25,
Organism=Homo sapiens, GI88758565, Length=247, Percent_Identity=30.3643724696356, Blast_Score=112, Evalue=4e-25,
Organism=Homo sapiens, GI27436981, Length=187, Percent_Identity=37.4331550802139, Blast_Score=109, Evalue=3e-24,
Organism=Homo sapiens, GI27436984, Length=190, Percent_Identity=35.7894736842105, Blast_Score=107, Evalue=1e-23,
Organism=Homo sapiens, GI27436986, Length=190, Percent_Identity=35.7894736842105, Blast_Score=107, Evalue=1e-23,
Organism=Homo sapiens, GI4504817, Length=268, Percent_Identity=28.3582089552239, Blast_Score=106, Evalue=2e-23,
Organism=Homo sapiens, GI119395748, Length=183, Percent_Identity=33.3333333333333, Blast_Score=106, Evalue=2e-23,
Organism=Homo sapiens, GI9789987, Length=202, Percent_Identity=35.1485148514851, Blast_Score=106, Evalue=2e-23,
Organism=Homo sapiens, GI4826782, Length=206, Percent_Identity=31.0679611650485, Blast_Score=106, Evalue=3e-23,
Organism=Homo sapiens, GI25952087, Length=188, Percent_Identity=32.9787234042553, Blast_Score=105, Evalue=4e-23,
Organism=Homo sapiens, GI25952092, Length=197, Percent_Identity=32.48730964467, Blast_Score=105, Evalue=5e-23,
Organism=Homo sapiens, GI25952108, Length=237, Percent_Identity=32.0675105485232, Blast_Score=101, Evalue=6e-22,
Organism=Homo sapiens, GI5031819, Length=180, Percent_Identity=35, Blast_Score=101, Evalue=8e-22,
Organism=Homo sapiens, GI13492973, Length=186, Percent_Identity=35.4838709677419, Blast_Score=101, Evalue=8e-22,
Organism=Homo sapiens, GI4504821, Length=243, Percent_Identity=29.2181069958848, Blast_Score=100, Evalue=1e-21,
Organism=Homo sapiens, GI45383011, Length=223, Percent_Identity=31.8385650224215, Blast_Score=100, Evalue=3e-21,
Organism=Homo sapiens, GI19424136, Length=232, Percent_Identity=32.3275862068966, Blast_Score=98, Evalue=7e-21,
Organism=Homo sapiens, GI27436988, Length=193, Percent_Identity=34.1968911917098, Blast_Score=96, Evalue=3e-20,
Organism=Homo sapiens, GI27436996, Length=235, Percent_Identity=30.2127659574468, Blast_Score=94, Evalue=1e-19,
Organism=Homo sapiens, GI26638655, Length=239, Percent_Identity=29.7071129707113, Blast_Score=94, Evalue=2e-19,
Organism=Homo sapiens, GI26638653, Length=239, Percent_Identity=29.7071129707113, Blast_Score=94, Evalue=2e-19,
Organism=Homo sapiens, GI7657289, Length=243, Percent_Identity=34.156378600823, Blast_Score=92, Evalue=6e-19,
Organism=Homo sapiens, GI88758576, Length=180, Percent_Identity=31.6666666666667, Blast_Score=90, Evalue=2e-18,
Organism=Homo sapiens, GI24497462, Length=180, Percent_Identity=31.6666666666667, Blast_Score=89, Evalue=3e-18,
Organism=Homo sapiens, GI24497458, Length=205, Percent_Identity=30.2439024390244, Blast_Score=87, Evalue=2e-17,
Organism=Homo sapiens, GI27436993, Length=185, Percent_Identity=30.2702702702703, Blast_Score=87, Evalue=3e-17,
Organism=Homo sapiens, GI21217561, Length=205, Percent_Identity=30.7317073170732, Blast_Score=86, Evalue=3e-17,
Organism=Homo sapiens, GI19071574, Length=185, Percent_Identity=30.2702702702703, Blast_Score=86, Evalue=3e-17,
Organism=Homo sapiens, GI21217563, Length=205, Percent_Identity=30.7317073170732, Blast_Score=86, Evalue=4e-17,
Organism=Homo sapiens, GI24497460, Length=204, Percent_Identity=29.9019607843137, Blast_Score=85, Evalue=9e-17,
Organism=Homo sapiens, GI163792201, Length=180, Percent_Identity=30.5555555555556, Blast_Score=83, Evalue=3e-16,
Organism=Homo sapiens, GI4826786, Length=180, Percent_Identity=30, Blast_Score=83, Evalue=3e-16,
Organism=Homo sapiens, GI26051264, Length=215, Percent_Identity=26.9767441860465, Blast_Score=81, Evalue=1e-15,
Organism=Homo sapiens, GI236462242, Length=207, Percent_Identity=28.0193236714976, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI236462079, Length=184, Percent_Identity=29.3478260869565, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI236461942, Length=184, Percent_Identity=29.3478260869565, Blast_Score=80, Evalue=3e-15,
Organism=Homo sapiens, GI28373065, Length=184, Percent_Identity=29.3478260869565, Blast_Score=80, Evalue=3e-15,
Organism=Homo sapiens, GI236461719, Length=184, Percent_Identity=29.3478260869565, Blast_Score=80, Evalue=3e-15,
Organism=Homo sapiens, GI6912444, Length=231, Percent_Identity=27.7056277056277, Blast_Score=79, Evalue=5e-15,
Organism=Homo sapiens, GI32479527, Length=229, Percent_Identity=28.82096069869, Blast_Score=79, Evalue=5e-15,
Organism=Homo sapiens, GI32479525, Length=198, Percent_Identity=29.7979797979798, Blast_Score=78, Evalue=8e-15,
Organism=Homo sapiens, GI26051268, Length=239, Percent_Identity=25.5230125523013, Blast_Score=76, Evalue=3e-14,
Organism=Homo sapiens, GI26051266, Length=239, Percent_Identity=25.5230125523013, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI26051260, Length=239, Percent_Identity=25.5230125523013, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI26051262, Length=211, Percent_Identity=26.5402843601896, Blast_Score=73, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI71989381, Length=213, Percent_Identity=32.8638497652582, Blast_Score=114, Evalue=6e-26,
Organism=Caenorhabditis elegans, GI71989376, Length=213, Percent_Identity=32.8638497652582, Blast_Score=114, Evalue=7e-26,
Organism=Caenorhabditis elegans, GI71989369, Length=213, Percent_Identity=32.8638497652582, Blast_Score=114, Evalue=7e-26,
Organism=Caenorhabditis elegans, GI71989361, Length=213, Percent_Identity=32.8638497652582, Blast_Score=114, Evalue=8e-26,
Organism=Caenorhabditis elegans, GI71994313, Length=270, Percent_Identity=31.1111111111111, Blast_Score=108, Evalue=3e-24,
Organism=Caenorhabditis elegans, GI17544122, Length=187, Percent_Identity=32.0855614973262, Blast_Score=107, Evalue=9e-24,
Organism=Caenorhabditis elegans, GI193206869, Length=205, Percent_Identity=31.219512195122, Blast_Score=100, Evalue=7e-22,
Organism=Caenorhabditis elegans, GI25148255, Length=182, Percent_Identity=32.967032967033, Blast_Score=100, Evalue=9e-22,
Organism=Caenorhabditis elegans, GI17569273, Length=201, Percent_Identity=29.3532338308458, Blast_Score=100, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI71994320, Length=241, Percent_Identity=31.5352697095436, Blast_Score=98, Evalue=4e-21,
Organism=Caenorhabditis elegans, GI71994134, Length=187, Percent_Identity=32.620320855615, Blast_Score=97, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI32564068, Length=217, Percent_Identity=34.1013824884793, Blast_Score=94, Evalue=7e-20,
Organism=Caenorhabditis elegans, GI115532628, Length=217, Percent_Identity=34.1013824884793, Blast_Score=94, Evalue=7e-20,
Organism=Caenorhabditis elegans, GI71998749, Length=217, Percent_Identity=34.1013824884793, Blast_Score=94, Evalue=7e-20,
Organism=Caenorhabditis elegans, GI32564074, Length=217, Percent_Identity=34.1013824884793, Blast_Score=94, Evalue=8e-20,
Organism=Caenorhabditis elegans, GI32564070, Length=216, Percent_Identity=34.2592592592593, Blast_Score=94, Evalue=9e-20,
Organism=Caenorhabditis elegans, GI32564072, Length=216, Percent_Identity=34.2592592592593, Blast_Score=94, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI72000220, Length=229, Percent_Identity=29.2576419213974, Blast_Score=93, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI25147238, Length=230, Percent_Identity=26.9565217391304, Blast_Score=91, Evalue=5e-19,
Organism=Caenorhabditis elegans, GI25147242, Length=230, Percent_Identity=26.9565217391304, Blast_Score=91, Evalue=6e-19,
Organism=Caenorhabditis elegans, GI71986011, Length=176, Percent_Identity=37.5, Blast_Score=89, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI71986003, Length=176, Percent_Identity=37.5, Blast_Score=89, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI71986008, Length=176, Percent_Identity=37.5, Blast_Score=89, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI71986574, Length=182, Percent_Identity=26.9230769230769, Blast_Score=87, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI71985535, Length=190, Percent_Identity=34.7368421052632, Blast_Score=87, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI193207406, Length=199, Percent_Identity=34.1708542713568, Blast_Score=84, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI32564084, Length=183, Percent_Identity=30.0546448087432, Blast_Score=83, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI32564082, Length=184, Percent_Identity=30.9782608695652, Blast_Score=83, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI32564088, Length=183, Percent_Identity=30.0546448087432, Blast_Score=83, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI32564076, Length=183, Percent_Identity=30.0546448087432, Blast_Score=83, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI32564090, Length=184, Percent_Identity=30.9782608695652, Blast_Score=83, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI32564080, Length=184, Percent_Identity=30.9782608695652, Blast_Score=83, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI32564086, Length=183, Percent_Identity=30.0546448087432, Blast_Score=82, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI32564066, Length=227, Percent_Identity=28.1938325991189, Blast_Score=82, Evalue=4e-16,
Organism=Drosophila melanogaster, GI24656289, Length=217, Percent_Identity=34.5622119815668, Blast_Score=113, Evalue=1e-25,
Organism=Drosophila melanogaster, GI24656294, Length=217, Percent_Identity=34.5622119815668, Blast_Score=113, Evalue=1e-25,
Organism=Drosophila melanogaster, GI116007764, Length=217, Percent_Identity=34.5622119815668, Blast_Score=113, Evalue=2e-25,
Organism=Drosophila melanogaster, GI281365536, Length=239, Percent_Identity=33.0543933054393, Blast_Score=113, Evalue=2e-25,
Organism=Drosophila melanogaster, GI17737641, Length=188, Percent_Identity=34.5744680851064, Blast_Score=112, Evalue=3e-25,
Organism=Drosophila melanogaster, GI161084970, Length=188, Percent_Identity=34.5744680851064, Blast_Score=112, Evalue=3e-25,
Organism=Drosophila melanogaster, GI24642914, Length=203, Percent_Identity=32.512315270936, Blast_Score=100, Evalue=1e-21,
Organism=Drosophila melanogaster, GI45555859, Length=195, Percent_Identity=32.8205128205128, Blast_Score=100, Evalue=1e-21,
Organism=Drosophila melanogaster, GI45549143, Length=195, Percent_Identity=32.8205128205128, Blast_Score=100, Evalue=1e-21,
Organism=Drosophila melanogaster, GI24642910, Length=203, Percent_Identity=32.512315270936, Blast_Score=100, Evalue=1e-21,
Organism=Drosophila melanogaster, GI24642916, Length=203, Percent_Identity=32.512315270936, Blast_Score=100, Evalue=1e-21,
Organism=Drosophila melanogaster, GI17136468, Length=183, Percent_Identity=31.6939890710383, Blast_Score=96, Evalue=2e-20,
Organism=Drosophila melanogaster, GI221330117, Length=235, Percent_Identity=31.063829787234, Blast_Score=96, Evalue=3e-20,
Organism=Drosophila melanogaster, GI221330119, Length=236, Percent_Identity=30.9322033898305, Blast_Score=96, Evalue=3e-20,
Organism=Drosophila melanogaster, GI221330674, Length=183, Percent_Identity=31.6939890710383, Blast_Score=96, Evalue=3e-20,
Organism=Drosophila melanogaster, GI281363095, Length=236, Percent_Identity=30.9322033898305, Blast_Score=96, Evalue=3e-20,
Organism=Drosophila melanogaster, GI281363097, Length=236, Percent_Identity=30.9322033898305, Blast_Score=96, Evalue=4e-20,
Organism=Drosophila melanogaster, GI28574020, Length=183, Percent_Identity=31.6939890710383, Blast_Score=96, Evalue=4e-20,
Organism=Drosophila melanogaster, GI161076829, Length=188, Percent_Identity=30.3191489361702, Blast_Score=94, Evalue=1e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018490
- InterPro:   IPR018488
- InterPro:   IPR000595
- InterPro:   IPR005821
- InterPro:   IPR003091
- InterPro:   IPR014710 [H]

Pfam domain/function: PF00027 cNMP_binding; PF00520 Ion_trans [H]

EC number: NA

Molecular weight: Translated: 32222; Mature: 32091

Theoretical pI: Translated: 9.95; Mature: 9.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKTRKSPIKHHLYTIIFGTHTKGGRRFDIALIILILLSQATLILDSISSVRLQYGEVLW
CCCCCCCHHHHHHEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KLEYLFTAIFTLEYVLRLYCSPRPSSYAKSFYGIIDLLAILPTYLALFFPSASYIAIIRL
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
LRVMRIFRILKLVRYLQDSNILLRSLLMAKRKILIFFSTVAILVSVFGSLMFVIEGPENG
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCC
FTSIPQSIYWAIVTITTVGYGDLVPHTPLGKAIASLTMLLGYSILAVPTGIITAELNQEM
CHHCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NTHRDLVRCPNCLKGGHESDAIHCKHCGSRLPEPDKRIVNTINAKE
HHHHHHHHCCHHHCCCCCCCCCHHHHHCCCCCCHHHHHHHHCCCCC
>Mature Secondary Structure 
TKTRKSPIKHHLYTIIFGTHTKGGRRFDIALIILILLSQATLILDSISSVRLQYGEVLW
CCCCCCHHHHHHEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KLEYLFTAIFTLEYVLRLYCSPRPSSYAKSFYGIIDLLAILPTYLALFFPSASYIAIIRL
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
LRVMRIFRILKLVRYLQDSNILLRSLLMAKRKILIFFSTVAILVSVFGSLMFVIEGPENG
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCC
FTSIPQSIYWAIVTITTVGYGDLVPHTPLGKAIASLTMLLGYSILAVPTGIITAELNQEM
CHHCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NTHRDLVRCPNCLKGGHESDAIHCKHCGSRLPEPDKRIVNTINAKE
HHHHHHHHCCHHHCCCCCCCCCHHHHHCCCCCCHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1522059 [H]