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The map label for this gene is ybbN [H]

Identifier: 59711390

GI number: 59711390

Start: 856474

End: 857328

Strand: Reverse

Name: ybbN [H]

Synonym: VF_0783

Alternate gene names: 59711390

Gene position: 857328-856474 (Counterclockwise)

Preceding gene: 59711391

Following gene: 59711388

Centisome position: 29.59

GC content: 39.3

Gene sequence:

>855_bases
ATGCAAGCAGAACATAGCGTTGAATTGAACGAACAAAATTTCCAGCAAATTATAGAAAGCTCAGTGCAAACCCCTGTGTT
GATTCACTTCTGGGCGCCAATGAGCCAAGAAAGCCTTTCTGTAATACCTGCACTTCAACAGCTTGCCCAACAATACGGTG
ATGCTGTTACCCTTGCCCTACTTAATTGCCAAGAACAACAAGGCCTTGCTCAACAATTTGGTGTGCAAACATTACCTACT
ATTGCCTTATTTAAAAATGGTCAAGCCGTAGATGGTATGGGTGGTCCTCAAACAATTGAAGCCATCCAAGGTATGTTAAG
CAAACACTTACCTAGTCAAGAAGAGCTTCAATTAGGGCAAGCGTTTAAATTAGTTGAAGAGGGTGAATACCAAGCCGCAC
TCCCTATGTTGATCGCTTTATTAGACCATTTTGGTGGTAATGGGCAAATCAAGCTTCATATCGCGCAATGCTATATTGAA
ACACAGGCCTATGATCAAGCTGAAAGCATCTTGTCTGAAATTTTAATGCAAGATCAGGATAGTAAATATAAAGAATTAGT
CGCTAAACTTGAGCTACATAAACAAGCAGGTAATACACCTGAAATTCAAGCATTAGAAGAAAAACACAGTGCAGAACCAA
CCAATACTGAAGTCGCATTAGAGCTTGCTATTCAATATAGCCAAGTAAATCGACAAGAAGAAGCGTTAGAGATTTTAATG
GCGATACTAGTTAAAGATCTTAATGCTCAAGATGGCCAAGTAAAAAAAGTAATGATGGATATTCTATCTGCTCTAGGTCA
AGGTAACCCTATCGCAGGTAAATTCCGTCGCCAACTCTATTCTCTACTTTATTAA

Upstream 100 bases:

>100_bases
TATTTTAATATCGTGGCTTTCTTGTTTTTTGTCTCCTTGAAAATAGCCCACAAACGCCATATATCTACTAAAAGAGATAA
TTCTGATTTTAGGACAAGAT

Downstream 100 bases:

>100_bases
AGTAAAGCATATAACCTGTCATTATTTAACCTGTTGTTATTTCTTCTCATGGCAACAGGTTAATCCTTTAATAATTGGAC
AATCGTTACTATCATCTCCA

Product: thioredoxin domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 284; Mature: 284

Protein sequence:

>284_residues
MQAEHSVELNEQNFQQIIESSVQTPVLIHFWAPMSQESLSVIPALQQLAQQYGDAVTLALLNCQEQQGLAQQFGVQTLPT
IALFKNGQAVDGMGGPQTIEAIQGMLSKHLPSQEELQLGQAFKLVEEGEYQAALPMLIALLDHFGGNGQIKLHIAQCYIE
TQAYDQAESILSEILMQDQDSKYKELVAKLELHKQAGNTPEIQALEEKHSAEPTNTEVALELAIQYSQVNRQEEALEILM
AILVKDLNAQDGQVKKVMMDILSALGQGNPIAGKFRRQLYSLLY

Sequences:

>Translated_284_residues
MQAEHSVELNEQNFQQIIESSVQTPVLIHFWAPMSQESLSVIPALQQLAQQYGDAVTLALLNCQEQQGLAQQFGVQTLPT
IALFKNGQAVDGMGGPQTIEAIQGMLSKHLPSQEELQLGQAFKLVEEGEYQAALPMLIALLDHFGGNGQIKLHIAQCYIE
TQAYDQAESILSEILMQDQDSKYKELVAKLELHKQAGNTPEIQALEEKHSAEPTNTEVALELAIQYSQVNRQEEALEILM
AILVKDLNAQDGQVKKVMMDILSALGQGNPIAGKFRRQLYSLLY
>Mature_284_residues
MQAEHSVELNEQNFQQIIESSVQTPVLIHFWAPMSQESLSVIPALQQLAQQYGDAVTLALLNCQEQQGLAQQFGVQTLPT
IALFKNGQAVDGMGGPQTIEAIQGMLSKHLPSQEELQLGQAFKLVEEGEYQAALPMLIALLDHFGGNGQIKLHIAQCYIE
TQAYDQAESILSEILMQDQDSKYKELVAKLELHKQAGNTPEIQALEEKHSAEPTNTEVALELAIQYSQVNRQEEALEILM
AILVKDLNAQDGQVKKVMMDILSALGQGNPIAGKFRRQLYSLLY

Specific function: Unknown

COG id: COG3118

COG function: function code O; Thioredoxin domain-containing protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 thioredoxin domain [H]

Homologues:

Organism=Escherichia coli, GI87081747, Length=284, Percent_Identity=47.1830985915493, Blast_Score=258, Evalue=3e-70,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005746
- InterPro:   IPR017936
- InterPro:   IPR012336
- InterPro:   IPR013766
- InterPro:   IPR012335
- InterPro:   IPR011990 [H]

Pfam domain/function: PF00085 Thioredoxin [H]

EC number: NA

Molecular weight: Translated: 31467; Mature: 31467

Theoretical pI: Translated: 4.34; Mature: 4.34

Prosite motif: PS00430 TONB_DEPENDENT_REC_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQAEHSVELNEQNFQQIIESSVQTPVLIHFWAPMSQESLSVIPALQQLAQQYGDAVTLAL
CCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCHHHHHH
LNCQEQQGLAQQFGVQTLPTIALFKNGQAVDGMGGPQTIEAIQGMLSKHLPSQEELQLGQ
HHCHHHCCHHHHHCCHHCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHH
AFKLVEEGEYQAALPMLIALLDHFGGNGQIKLHIAQCYIETQAYDQAESILSEILMQDQD
HHHHHHCCCHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCC
SKYKELVAKLELHKQAGNTPEIQALEEKHSAEPTNTEVALELAIQYSQVNRQEEALEILM
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHH
AILVKDLNAQDGQVKKVMMDILSALGQGNPIAGKFRRQLYSLLY
HHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHC
>Mature Secondary Structure
MQAEHSVELNEQNFQQIIESSVQTPVLIHFWAPMSQESLSVIPALQQLAQQYGDAVTLAL
CCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCHHHHHH
LNCQEQQGLAQQFGVQTLPTIALFKNGQAVDGMGGPQTIEAIQGMLSKHLPSQEELQLGQ
HHCHHHCCHHHHHCCHHCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHH
AFKLVEEGEYQAALPMLIALLDHFGGNGQIKLHIAQCYIETQAYDQAESILSEILMQDQD
HHHHHHCCCHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCC
SKYKELVAKLELHKQAGNTPEIQALEEKHSAEPTNTEVALELAIQYSQVNRQEEALEILM
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHH
AILVKDLNAQDGQVKKVMMDILSALGQGNPIAGKFRRQLYSLLY
HHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]