| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is copG
Identifier: 59711387
GI number: 59711387
Start: 852729
End: 853166
Strand: Reverse
Name: copG
Synonym: VF_0780
Alternate gene names: NA
Gene position: 853166-852729 (Counterclockwise)
Preceding gene: 59711388
Following gene: 59711386
Centisome position: 29.44
GC content: 37.44
Gene sequence:
>438_bases ATGAAAAACGTAAAAAAAATAGCTTTCACTTCTCTTATGTTAATAAGCTCATCTGCATTTGCAGCAACCGAAGTTACTTC TTACAAATCCCCTTACTGCGGTTGTTGCACTGAATGGGAACAACACATGAAAGATAACGGTTATGACGTTAAAACTGAAA AGCATGAAGACATGAGTGCGATTAAGAAAAAACTAGGTGTTGATCCTCGTCTTACTTCTTGTCATACCGCTGTCATTGAT GGTTATGTATTTGAAGGTCATATTCCAGCATCTGATATTAAAGAATTTCTTGCTGATCCTCGTGACTACAAAGGACTAGC CGTTCCAGGTATGCCAATGGGCTCTCCGGGTATGGAATATGGAGATAAAAAAGACAAATACCAAGTTGTGGCGTTTAAAG AAAATGGAAAATTAGCGTTATTTAATACGCATAACTAG
Upstream 100 bases:
>100_bases GGTGGAACCATGATTAATGTAATTGGTATTTCTTTAATAGTCGCCATTGTTTTTTGGTTCTGGCTTTCACCTAATTCAAA GTAAATAGTGGAATATCACC
Downstream 100 bases:
>100_bases GGACTAGGGACTAGGGACTAGGGACTAGGGACTAGGGAAATAATAAACGGTGTTGAGTGATATCAATGCCGTTTTTATAT CAATCACAGTAAGTAAGAAT
Product: CopG protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 145; Mature: 145
Protein sequence:
>145_residues MKNVKKIAFTSLMLISSSAFAATEVTSYKSPYCGCCTEWEQHMKDNGYDVKTEKHEDMSAIKKKLGVDPRLTSCHTAVID GYVFEGHIPASDIKEFLADPRDYKGLAVPGMPMGSPGMEYGDKKDKYQVVAFKENGKLALFNTHN
Sequences:
>Translated_145_residues MKNVKKIAFTSLMLISSSAFAATEVTSYKSPYCGCCTEWEQHMKDNGYDVKTEKHEDMSAIKKKLGVDPRLTSCHTAVID GYVFEGHIPASDIKEFLADPRDYKGLAVPGMPMGSPGMEYGDKKDKYQVVAFKENGKLALFNTHN >Mature_145_residues MKNVKKIAFTSLMLISSSAFAATEVTSYKSPYCGCCTEWEQHMKDNGYDVKTEKHEDMSAIKKKLGVDPRLTSCHTAVID GYVFEGHIPASDIKEFLADPRDYKGLAVPGMPMGSPGMEYGDKKDKYQVVAFKENGKLALFNTHN
Specific function: Unknown
COG id: COG3019
COG function: function code R; Predicted metal-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16123; Mature: 16123
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 7.6 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 7.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNVKKIAFTSLMLISSSAFAATEVTSYKSPYCGCCTEWEQHMKDNGYDVKTEKHEDMSA CCCCHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHH IKKKLGVDPRLTSCHTAVIDGYVFEGHIPASDIKEFLADPRDYKGLAVPGMPMGSPGMEY HHHHHCCCCCCHHHHHHHHCCEEEECCCCHHHHHHHHCCCCCCCCEECCCCCCCCCCCCC GDKKDKYQVVAFKENGKLALFNTHN CCCCCCEEEEEECCCCCEEEEECCC >Mature Secondary Structure MKNVKKIAFTSLMLISSSAFAATEVTSYKSPYCGCCTEWEQHMKDNGYDVKTEKHEDMSA CCCCHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHH IKKKLGVDPRLTSCHTAVIDGYVFEGHIPASDIKEFLADPRDYKGLAVPGMPMGSPGMEY HHHHHCCCCCCHHHHHHHHCCEEEECCCCHHHHHHHHCCCCCCCCEECCCCCCCCCCCCC GDKKDKYQVVAFKENGKLALFNTHN CCCCCCEEEEEECCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA