Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
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Accession | NC_006840 |
Length | 2,897,536 |
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The map label for this gene is lnt [H]
Identifier: 59711362
GI number: 59711362
Start: 823271
End: 824785
Strand: Reverse
Name: lnt [H]
Synonym: VF_0755
Alternate gene names: 59711362
Gene position: 824785-823271 (Counterclockwise)
Preceding gene: 59711363
Following gene: 59711360
Centisome position: 28.47
GC content: 41.32
Gene sequence:
>1515_bases ATGCCTTTACTTTCTCATTACTTTATTCGCCTTCTTGTTGCTTTACTCTCTGGCGCAAGTGCAACCCTTGCTTTCGCTCC CTACTCTTTATGGGCCTTTGCTTTTATTGCGCCTTTAATCCTTTTATTACTAATGCATAAGCAAACAACCAAAAAAGCCA CTTGGTTAGGTTTTGTTTGGGGGTTAGGTTACTTTGGTGCAGGCGTGAGTTGGGTTCATGTCAGTATCGATAATTTTGGT GGTATGCCTGTTGCTGCCAGTCTATTTTTAATGATAGGACTGATCAGCTACCTTTCGTTATATCCAATGCTATTTGCATT TCTTTTACAGCGATTTTTTAGCAATCACAACATTACAAAGTACTTACTTGCCGCACCAGCTCTTTGGATTATCACCGATT GGCTTCGTGGTTGGGTATTTACTGGCTTTCCATGGTTATGGCTAGGTTACAGCCAAATTGATAGCCCACTGTCAGCTTGG GGACCTATTTTAGGTGTAGAAGGCATAACCGTCATGATCCTTCTGTCTGTCGGTACCATGGCATACAGCTTTATTGATAA GAAATGGGGATTACTGCTTATCCCTGCCGTTATTTTTGCAACCTCTTTTGCCATCAAACCTTTTGATTGGGTTACCCCTC AACCAGATAAAGCAACTAAAGTTGCGTTGATCCAAGGAAATGTGAACCAAGCAATAAAATGGCTCCCTAGTGAGCGTTGG CCAACGATCATGAAGTACATGGATTTAACGCGTAAAAATTGGGATGCCGATGTCATTGTATGGCCAGAAGCTGCAATTCC AGCATTAGAAATCGAAATTCCTAGCTTTCTTCGCAATTTAGATAGCGCAGCAACGATGAATAACAGCACAGTCATCACTG GTATCGTGGGCCAAAGCCCTACAGGAAATTTCTACAACAATATCATTTCATTAGGTGTTAATGGCACCAATGGATACGAT TATGGGCAGCAACCTAGATACAGCAAACACCATTTACTTCCATTTGGTGAGTTTGTTCCTTTTGAAAACTTATTACGTCC AATAGCGCCAATATTTAATCTACCGATGTCATCATTTAGTCGCGGCGATTATATCCAACCAAATATGGAAGCCAGTGGGT CACATTTAGCGCCCGCATTATGCTATGAAATCGTTTATGGAGAACAAGTGAGAGAAAATATTACCTCTCAAACTGATTAC ATACTAACGCTTTCAAACGACGCTTGGTTTGGTACCTCTATTGGTCCATTGCAACATATGGAAATGGCCCAAATGCGAGC TTTAGAAATAGGAAAACCTGTCATCCGCTCAACCAATAATGGAGTTACCGCAATTACGGATCATAAAGGGCAAATAACAA AACAAATCCCACAGTTCACAACTGCCGTATTACGTGGAGAGGTTATTCCTACTACAGGAACTACCCCTTACCGCTACTGG GGTTCGATTCCTTTATACTTATTAGTCGGTCTATTTCTGCTTGTTGCTTGGCGTAAACGAAAAGACAATATGTAA
Upstream 100 bases:
>100_bases AATAACAAAATCAGCCACTGATATTTCAGTGGCTGAACTTTATCTAAATTATACAGACTAACTCTCTTTCGCTACTTACC ACCTATTTGAGTTATAGCCG
Downstream 100 bases:
>100_bases TTTCATACGGTCTGTATTTCTTTTATTTTGATATACAGACCTTTAACCAATAGCCTTTTAAACTAAGGTTTTAAAGAAAC TCTTGTAAATTCTTCATGTT
Product: apolipoprotein N-acyltransferase
Products: NA
Alternate protein names: ALP N-acyltransferase [H]
Number of amino acids: Translated: 504; Mature: 503
Protein sequence:
>504_residues MPLLSHYFIRLLVALLSGASATLAFAPYSLWAFAFIAPLILLLLMHKQTTKKATWLGFVWGLGYFGAGVSWVHVSIDNFG GMPVAASLFLMIGLISYLSLYPMLFAFLLQRFFSNHNITKYLLAAPALWIITDWLRGWVFTGFPWLWLGYSQIDSPLSAW GPILGVEGITVMILLSVGTMAYSFIDKKWGLLLIPAVIFATSFAIKPFDWVTPQPDKATKVALIQGNVNQAIKWLPSERW PTIMKYMDLTRKNWDADVIVWPEAAIPALEIEIPSFLRNLDSAATMNNSTVITGIVGQSPTGNFYNNIISLGVNGTNGYD YGQQPRYSKHHLLPFGEFVPFENLLRPIAPIFNLPMSSFSRGDYIQPNMEASGSHLAPALCYEIVYGEQVRENITSQTDY ILTLSNDAWFGTSIGPLQHMEMAQMRALEIGKPVIRSTNNGVTAITDHKGQITKQIPQFTTAVLRGEVIPTTGTTPYRYW GSIPLYLLVGLFLLVAWRKRKDNM
Sequences:
>Translated_504_residues MPLLSHYFIRLLVALLSGASATLAFAPYSLWAFAFIAPLILLLLMHKQTTKKATWLGFVWGLGYFGAGVSWVHVSIDNFG GMPVAASLFLMIGLISYLSLYPMLFAFLLQRFFSNHNITKYLLAAPALWIITDWLRGWVFTGFPWLWLGYSQIDSPLSAW GPILGVEGITVMILLSVGTMAYSFIDKKWGLLLIPAVIFATSFAIKPFDWVTPQPDKATKVALIQGNVNQAIKWLPSERW PTIMKYMDLTRKNWDADVIVWPEAAIPALEIEIPSFLRNLDSAATMNNSTVITGIVGQSPTGNFYNNIISLGVNGTNGYD YGQQPRYSKHHLLPFGEFVPFENLLRPIAPIFNLPMSSFSRGDYIQPNMEASGSHLAPALCYEIVYGEQVRENITSQTDY ILTLSNDAWFGTSIGPLQHMEMAQMRALEIGKPVIRSTNNGVTAITDHKGQITKQIPQFTTAVLRGEVIPTTGTTPYRYW GSIPLYLLVGLFLLVAWRKRKDNM >Mature_503_residues PLLSHYFIRLLVALLSGASATLAFAPYSLWAFAFIAPLILLLLMHKQTTKKATWLGFVWGLGYFGAGVSWVHVSIDNFGG MPVAASLFLMIGLISYLSLYPMLFAFLLQRFFSNHNITKYLLAAPALWIITDWLRGWVFTGFPWLWLGYSQIDSPLSAWG PILGVEGITVMILLSVGTMAYSFIDKKWGLLLIPAVIFATSFAIKPFDWVTPQPDKATKVALIQGNVNQAIKWLPSERWP TIMKYMDLTRKNWDADVIVWPEAAIPALEIEIPSFLRNLDSAATMNNSTVITGIVGQSPTGNFYNNIISLGVNGTNGYDY GQQPRYSKHHLLPFGEFVPFENLLRPIAPIFNLPMSSFSRGDYIQPNMEASGSHLAPALCYEIVYGEQVRENITSQTDYI LTLSNDAWFGTSIGPLQHMEMAQMRALEIGKPVIRSTNNGVTAITDHKGQITKQIPQFTTAVLRGEVIPTTGTTPYRYWG SIPLYLLVGLFLLVAWRKRKDNM
Specific function: Transfers the fatty acyl group on membrane lipoproteins [H]
COG id: COG0815
COG function: function code M; Apolipoprotein N-acyltransferase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 CN hydrolase domain [H]
Homologues:
Organism=Escherichia coli, GI1786878, Length=509, Percent_Identity=46.9548133595285, Blast_Score=468, Evalue=1e-133,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004563 - InterPro: IPR003010 [H]
Pfam domain/function: PF00795 CN_hydrolase [H]
EC number: 2.3.1.- [C]
Molecular weight: Translated: 56378; Mature: 56247
Theoretical pI: Translated: 9.15; Mature: 9.15
Prosite motif: PS50263 CN_HYDROLASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLLSHYFIRLLVALLSGASATLAFAPYSLWAFAFIAPLILLLLMHKQTTKKATWLGFVW CCCHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLGYFGAGVSWVHVSIDNFGGMPVAASLFLMIGLISYLSLYPMLFAFLLQRFFSNHNITK HHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH YLLAAPALWIITDWLRGWVFTGFPWLWLGYSQIDSPLSAWGPILGVEGITVMILLSVGTM HHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHCCCHHHHCCHHCCCHHHHHHHHHHHHH AYSFIDKKWGLLLIPAVIFATSFAIKPFDWVTPQPDKATKVALIQGNVNQAIKWLPSERW HHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHCCCCCC PTIMKYMDLTRKNWDADVIVWPEAAIPALEIEIPSFLRNLDSAATMNNSTVITGIVGQSP HHHHHHHHHHCCCCCCCEEEECCCCCCEEEEEHHHHHHHHHHHHCCCCCEEEEEECCCCC TGNFYNNIISLGVNGTNGYDYGQQPRYSKHHLLPFGEFVPFENLLRPIAPIFNLPMSSFS CCHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHCCCHHHCC RGDYIQPNMEASGSHLAPALCYEIVYGEQVRENITSQTDYILTLSNDAWFGTSIGPLQHM CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHH EMAQMRALEIGKPVIRSTNNGVTAITDHKGQITKQIPQFTTAVLRGEVIPTTGTTPYRYW HHHHHHHHHCCCHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCEECCCCCCCCCCC GSIPLYLLVGLFLLVAWRKRKDNM CCCHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure PLLSHYFIRLLVALLSGASATLAFAPYSLWAFAFIAPLILLLLMHKQTTKKATWLGFVW CCHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLGYFGAGVSWVHVSIDNFGGMPVAASLFLMIGLISYLSLYPMLFAFLLQRFFSNHNITK HHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH YLLAAPALWIITDWLRGWVFTGFPWLWLGYSQIDSPLSAWGPILGVEGITVMILLSVGTM HHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHCCCHHHHCCHHCCCHHHHHHHHHHHHH AYSFIDKKWGLLLIPAVIFATSFAIKPFDWVTPQPDKATKVALIQGNVNQAIKWLPSERW HHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHCCCCCC PTIMKYMDLTRKNWDADVIVWPEAAIPALEIEIPSFLRNLDSAATMNNSTVITGIVGQSP HHHHHHHHHHCCCCCCCEEEECCCCCCEEEEEHHHHHHHHHHHHCCCCCEEEEEECCCCC TGNFYNNIISLGVNGTNGYDYGQQPRYSKHHLLPFGEFVPFENLLRPIAPIFNLPMSSFS CCHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHCCCHHHCC RGDYIQPNMEASGSHLAPALCYEIVYGEQVRENITSQTDYILTLSNDAWFGTSIGPLQHM CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHH EMAQMRALEIGKPVIRSTNNGVTAITDHKGQITKQIPQFTTAVLRGEVIPTTGTTPYRYW HHHHHHHHHCCCHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCEECCCCCCCCCCC GSIPLYLLVGLFLLVAWRKRKDNM CCCHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Transferases; Acyltransferases; Transferring groups other than amino-acyl groups [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 12620739 [H]