Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
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Accession | NC_006840 |
Length | 2,897,536 |
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The map label for this gene is yajG [C]
Identifier: 59711329
GI number: 59711329
Start: 789201
End: 789770
Strand: Reverse
Name: yajG [C]
Synonym: VF_0722
Alternate gene names: 59711329
Gene position: 789770-789201 (Counterclockwise)
Preceding gene: 59711330
Following gene: 59711328
Centisome position: 27.26
GC content: 33.51
Gene sequence:
>570_bases ATGAAAAAGGTCATCATTGCCCTTTCTGCACTTTTTTTAGCTGCTTGTAGTGCTCCATCAGATCCACAATTGGATATTCA ACCTAAAGCATCATCAAATGCTCACCAAATCGTTGATGGTATTAAGTTAACATTAGATAGCAGCGATTTACGTACTGCAC AATACGTCGCTGTAATTGATAATGGTCGTCAAAATGTACAACCAATTCACGCAAAACAAAATCTACGTGTAACTCTAGAA GACGCATTATCTTCACAACTTAAAACTCAAGGTTTTGTTATTACAGTAGATAGCGATAACACATTACGTTTAGATATTAT TGAAGCTCTAGTAAGTGTGCAACATTCTCTAATGAGTAATGAAATCAAAACTCAGGTTAAGCTTCAAATTACAGCAGAAA CACCAAAAGGTAAGTTTGTTAAAACCTATAATGGCGTATCAGAAAAAACAGGCTCTATGAGTGCTGATAATCAAGACATT GAACAAGTTCTTAATGACTTATTAAATGCAGTATTAGATAAAATCGCTGTTGATGAAGAATTACAAACATACATTAAAGG TAACTTTTAA
Upstream 100 bases:
>100_bases TATTTGGTGAAGAAAATGTCACCACAGTTGCTAGCAATTCAAAATTCGTTATTTTAGAAGCTGTTAAAGCCGAAAAATCA AAATAAAAAAGGATTACACC
Downstream 100 bases:
>100_bases TGATTAAAATGATTTCAAAAGCCGCATTAATTATTGCTGCTCTTAGCACAAGTCAAATGGCTCTAGCAGAATCGGTAAAA TTTGAAACCACATTGGGTAA
Product: putative lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 189; Mature: 189
Protein sequence:
>189_residues MKKVIIALSALFLAACSAPSDPQLDIQPKASSNAHQIVDGIKLTLDSSDLRTAQYVAVIDNGRQNVQPIHAKQNLRVTLE DALSSQLKTQGFVITVDSDNTLRLDIIEALVSVQHSLMSNEIKTQVKLQITAETPKGKFVKTYNGVSEKTGSMSADNQDI EQVLNDLLNAVLDKIAVDEELQTYIKGNF
Sequences:
>Translated_189_residues MKKVIIALSALFLAACSAPSDPQLDIQPKASSNAHQIVDGIKLTLDSSDLRTAQYVAVIDNGRQNVQPIHAKQNLRVTLE DALSSQLKTQGFVITVDSDNTLRLDIIEALVSVQHSLMSNEIKTQVKLQITAETPKGKFVKTYNGVSEKTGSMSADNQDI EQVLNDLLNAVLDKIAVDEELQTYIKGNF >Mature_189_residues MKKVIIALSALFLAACSAPSDPQLDIQPKASSNAHQIVDGIKLTLDSSDLRTAQYVAVIDNGRQNVQPIHAKQNLRVTLE DALSSQLKTQGFVITVDSDNTLRLDIIEALVSVQHSLMSNEIKTQVKLQITAETPKGKFVKTYNGVSEKTGSMSADNQDI EQVLNDLLNAVLDKIAVDEELQTYIKGNF
Specific function: Unknown
COG id: COG3056
COG function: function code M; Uncharacterized lipoprotein
Gene ontology:
Cell location: Attached To The Membrane By A Lipid Anchor [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20649; Mature: 20649
Theoretical pI: Translated: 4.99; Mature: 4.99
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKVIIALSALFLAACSAPSDPQLDIQPKASSNAHQIVDGIKLTLDSSDLRTAQYVAVID CCHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCHHHHHCCEEEEECCCCCCCEEEEEEEE NGRQNVQPIHAKQNLRVTLEDALSSQLKTQGFVITVDSDNTLRLDIIEALVSVQHSLMSN CCCCCCCCCCCCCCCEEEHHHHHHHHHHHCCEEEEECCCCEEEHHHHHHHHHHHHHHHHH EIKTQVKLQITAETPKGKFVKTYNGVSEKTGSMSADNQDIEQVLNDLLNAVLDKIAVDEE HCCEEEEEEEEEECCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHH LQTYIKGNF HHHHHCCCC >Mature Secondary Structure MKKVIIALSALFLAACSAPSDPQLDIQPKASSNAHQIVDGIKLTLDSSDLRTAQYVAVID CCHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCHHHHHCCEEEEECCCCCCCEEEEEEEE NGRQNVQPIHAKQNLRVTLEDALSSQLKTQGFVITVDSDNTLRLDIIEALVSVQHSLMSN CCCCCCCCCCCCCCCEEEHHHHHHHHHHHCCEEEEECCCCEEEHHHHHHHHHHHHHHHHH EIKTQVKLQITAETPKGKFVKTYNGVSEKTGSMSADNQDIEQVLNDLLNAVLDKIAVDEE HCCEEEEEEEEEECCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHH LQTYIKGNF HHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA