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The map label for this gene is yeiE [H]

Identifier: 59711186

GI number: 59711186

Start: 631019

End: 631897

Strand: Reverse

Name: yeiE [H]

Synonym: VF_0579

Alternate gene names: 59711186

Gene position: 631897-631019 (Counterclockwise)

Preceding gene: 59711192

Following gene: 59711184

Centisome position: 21.81

GC content: 36.06

Gene sequence:

>879_bases
ATGAGAATTTCACTCAAGCAACTTAATGTTTTTACTGTAATAGCACAAGAAAAAACCATGACAAAAGCTGCGGAGCGACT
GTATATAACTAAACCAGCCGTAAGTTTATCTCTCTCTGAATTAGAAAAAAATCTCGGTTATAAAGTCTTTGATCGTGTAA
ATAACCGCTTAGTATTAAATAGTGAAGGTCGTCAATTACTTCCTCTAGCAGATGAGCTATTAGAGCGAGCTGAAGTGATT
GAGCACCAATTTGCAACGGATAGTCAGCTGACAGGCTCATTAAACATTGGAGCTAGTGATACGATTGGTAATCATATTGC
GCCAGTATTATTGAGTAAATTCCAACAACAATACCCATGTGATATTCAGCAGCTATTTATTTCAAACACAGCACAAATCA
TCAATAGATTATTAGAATTTCAGCTTGATATCGGATTAGTTGAAGGTAAAGCACATCACCCAAAATTAAATATGATTGAA
TGGCGACGAGACGACATGTATTTAGTGTGCTCGCCTTCCCATCCTTTAGCGACTAAAGCTCAAGTGACATTAGATGATTT
AGAGCATTCAACTTGGTTACTACGTGAAGAAGGTTCAGGCAGTCGCGAATATTTTATTAATCATATCGCCGCCAACTTAA
ATGACTGGCATGAATCATTACAACTTCATACCACTGAGGCGATCATTAATTGTTGTGCTGAAAATATGGGGTTAGCATGT
TTATCTCAACTCGCAGCACAAAACGCAATAAATGATGGTCGCTTAGTTAAATTGGCTTATAACAAAACATTGGCAAGACA
GTATTGGTTATTAGTACATAAAGAAAAATACCAAACGCCATTACTGCAATATTTTATGAACTTTATTCAACAAAAATGA

Upstream 100 bases:

>100_bases
TTTTAATCGGAACAATCCATTAATAAAATTTGTATAAATTAAAACTAGCGTTAAAATAAAATTAACGACTTAGCTTTTAA
TTAATTTAGGACTTCCTGTC

Downstream 100 bases:

>100_bases
GGCTGTTTAGCCTCATCTCAACAAATATCTAACGCTGGTGAGCAGGAAGATCGTGAGTTTCATACGCATCTGCAAATGAA
TGGTTACGATCTCGATGTTT

Product: DNA-binding transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 292; Mature: 292

Protein sequence:

>292_residues
MRISLKQLNVFTVIAQEKTMTKAAERLYITKPAVSLSLSELEKNLGYKVFDRVNNRLVLNSEGRQLLPLADELLERAEVI
EHQFATDSQLTGSLNIGASDTIGNHIAPVLLSKFQQQYPCDIQQLFISNTAQIINRLLEFQLDIGLVEGKAHHPKLNMIE
WRRDDMYLVCSPSHPLATKAQVTLDDLEHSTWLLREEGSGSREYFINHIAANLNDWHESLQLHTTEAIINCCAENMGLAC
LSQLAAQNAINDGRLVKLAYNKTLARQYWLLVHKEKYQTPLLQYFMNFIQQK

Sequences:

>Translated_292_residues
MRISLKQLNVFTVIAQEKTMTKAAERLYITKPAVSLSLSELEKNLGYKVFDRVNNRLVLNSEGRQLLPLADELLERAEVI
EHQFATDSQLTGSLNIGASDTIGNHIAPVLLSKFQQQYPCDIQQLFISNTAQIINRLLEFQLDIGLVEGKAHHPKLNMIE
WRRDDMYLVCSPSHPLATKAQVTLDDLEHSTWLLREEGSGSREYFINHIAANLNDWHESLQLHTTEAIINCCAENMGLAC
LSQLAAQNAINDGRLVKLAYNKTLARQYWLLVHKEKYQTPLLQYFMNFIQQK
>Mature_292_residues
MRISLKQLNVFTVIAQEKTMTKAAERLYITKPAVSLSLSELEKNLGYKVFDRVNNRLVLNSEGRQLLPLADELLERAEVI
EHQFATDSQLTGSLNIGASDTIGNHIAPVLLSKFQQQYPCDIQQLFISNTAQIINRLLEFQLDIGLVEGKAHHPKLNMIE
WRRDDMYLVCSPSHPLATKAQVTLDDLEHSTWLLREEGSGSREYFINHIAANLNDWHESLQLHTTEAIINCCAENMGLAC
LSQLAAQNAINDGRLVKLAYNKTLARQYWLLVHKEKYQTPLLQYFMNFIQQK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788481, Length=289, Percent_Identity=34.2560553633218, Blast_Score=186, Evalue=1e-48,
Organism=Escherichia coli, GI1788748, Length=247, Percent_Identity=27.9352226720648, Blast_Score=91, Evalue=7e-20,
Organism=Escherichia coli, GI157672245, Length=295, Percent_Identity=27.1186440677966, Blast_Score=88, Evalue=6e-19,
Organism=Escherichia coli, GI1787879, Length=302, Percent_Identity=25.8278145695364, Blast_Score=84, Evalue=9e-18,
Organism=Escherichia coli, GI1787601, Length=290, Percent_Identity=23.7931034482759, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI87082132, Length=290, Percent_Identity=21.0344827586207, Blast_Score=82, Evalue=4e-17,
Organism=Escherichia coli, GI1786401, Length=294, Percent_Identity=23.469387755102, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1788887, Length=291, Percent_Identity=23.3676975945017, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI1789173, Length=297, Percent_Identity=25.2525252525253, Blast_Score=76, Evalue=3e-15,
Organism=Escherichia coli, GI87081904, Length=208, Percent_Identity=28.3653846153846, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI145693105, Length=253, Percent_Identity=22.5296442687747, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1790399, Length=273, Percent_Identity=20.8791208791209, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1789204, Length=263, Percent_Identity=22.8136882129278, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1787806, Length=178, Percent_Identity=23.5955056179775, Blast_Score=68, Evalue=6e-13,
Organism=Escherichia coli, GI1788296, Length=192, Percent_Identity=28.125, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1787530, Length=299, Percent_Identity=22.0735785953177, Blast_Score=63, Evalue=2e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 33347; Mature: 33347

Theoretical pI: Translated: 6.67; Mature: 6.67

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRISLKQLNVFTVIAQEKTMTKAAERLYITKPAVSLSLSELEKNLGYKVFDRVNNRLVLN
CCCCHHHCEEEEEEECHHHHHHHHHHEEEECCCHHHHHHHHHHHCCHHHHHHCCCEEEEC
SEGRQLLPLADELLERAEVIEHQFATDSQLTGSLNIGASDTIGNHIAPVLLSKFQQQYPC
CCCCEECHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCC
DIQQLFISNTAQIINRLLEFQLDIGLVEGKAHHPKLNMIEWRRDDMYLVCSPSHPLATKA
HHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCCCCCEEEECCCCEEEEECCCCCCCCCE
QVTLDDLEHSTWLLREEGSGSREYFINHIAANLNDWHESLQLHTTEAIINCCAENMGLAC
EEEHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
LSQLAAQNAINDGRLVKLAYNKTLARQYWLLVHKEKYQTPLLQYFMNFIQQK
HHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHEECHHHCCHHHHHHHHHHCCC
>Mature Secondary Structure
MRISLKQLNVFTVIAQEKTMTKAAERLYITKPAVSLSLSELEKNLGYKVFDRVNNRLVLN
CCCCHHHCEEEEEEECHHHHHHHHHHEEEECCCHHHHHHHHHHHCCHHHHHHCCCEEEEC
SEGRQLLPLADELLERAEVIEHQFATDSQLTGSLNIGASDTIGNHIAPVLLSKFQQQYPC
CCCCEECHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCC
DIQQLFISNTAQIINRLLEFQLDIGLVEGKAHHPKLNMIEWRRDDMYLVCSPSHPLATKA
HHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCCCCCEEEECCCCEEEEECCCCCCCCCE
QVTLDDLEHSTWLLREEGSGSREYFINHIAANLNDWHESLQLHTTEAIINCCAENMGLAC
EEEHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
LSQLAAQNAINDGRLVKLAYNKTLARQYWLLVHKEKYQTPLLQYFMNFIQQK
HHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHEECHHHCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]