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The map label for this gene is fdhD [H]

Identifier: 57652213

GI number: 57652213

Start: 2334112

End: 2334909

Strand: Direct

Name: fdhD [H]

Synonym: SACOL2273

Alternate gene names: 57652213

Gene position: 2334112-2334909 (Clockwise)

Preceding gene: 57652207

Following gene: 57652220

Centisome position: 83.08

GC content: 34.09

Gene sequence:

>798_bases
ATGAACAAAGATGTATCTTTAGGTCAACCAATTGTTAGATATGAAGATGGAAAATTATTCAATACAACAGATCAATATGT
GACAGAATTTCCACTTACAATTATGGTGAATGGTGAAGAATTTGCGACTGTTATATGCAGTCCAACAAACCTTGAGGAGT
TAGTCATTGGATTTCTGGCTTCGGAAGGTGCCATTTTAAAGCGAGATGAATTAAAATCTGTACTGATTGATGATAGTAAA
GGTTTTGCCCATGTTGAACTTAATAAAGATTTAGGCGATCGCTTTCAATATTCCACAAAACGAATGATTGCATCTTGTTG
CGGAAAGAGTCGTGAGTTTTATTTTCAAAATGATGCTGCTATCGCTAAAACATCTATGTCTAAAATCACTTTAACTCCAA
TGCAAATTATTAACATGATGACTCGATTACAAAGTGCAAGTCATATTTACCAAGAAACAGGTGGCTTACATAATGCTGCT
ATAAGCGATGGTTTGACATTTTTTGTACATCGACAAGACATTGGTAGACATAACGCTCTAGATAAATTATATGGATTTTG
TATTCAGCGACATATTACTGTCCGAGATAAAGTATTAATTTTTAGTGGACGTATTTCATCAGAAATTTTAATTAAAGCCG
CAAAAATTGGTGTTGGCGTCATTTTATCTAAATCAGCTCCGACAACGCTTGCTGTAACCTTAGCTAATGACCTAAATATT
ACGGCAGTTGGATTTATTCGAAATGGTGGCTTTAATATATACAGTCATCCAGAACGTATCATTGATTCTGAACAATAA

Upstream 100 bases:

>100_bases
ATTAATTTTTATCAATCAAATTTCAAACTTAAGCAAATATGTTAAAATTTTAAGCAAATTGCTTTAAAATAAAGTTTAAG
CTAATTAAAGGGGTTAGATA

Downstream 100 bases:

>100_bases
CATATTCATTATAGTGTGTCATAATGAACGATATTCTACATGAATCAACAATTTAAACGCACTATTTTTATAAGTATAAG
TAGCTCAAAACAATTTAAAA

Product: formate dehydrogenase accessory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 265; Mature: 265

Protein sequence:

>265_residues
MNKDVSLGQPIVRYEDGKLFNTTDQYVTEFPLTIMVNGEEFATVICSPTNLEELVIGFLASEGAILKRDELKSVLIDDSK
GFAHVELNKDLGDRFQYSTKRMIASCCGKSREFYFQNDAAIAKTSMSKITLTPMQIINMMTRLQSASHIYQETGGLHNAA
ISDGLTFFVHRQDIGRHNALDKLYGFCIQRHITVRDKVLIFSGRISSEILIKAAKIGVGVILSKSAPTTLAVTLANDLNI
TAVGFIRNGGFNIYSHPERIIDSEQ

Sequences:

>Translated_265_residues
MNKDVSLGQPIVRYEDGKLFNTTDQYVTEFPLTIMVNGEEFATVICSPTNLEELVIGFLASEGAILKRDELKSVLIDDSK
GFAHVELNKDLGDRFQYSTKRMIASCCGKSREFYFQNDAAIAKTSMSKITLTPMQIINMMTRLQSASHIYQETGGLHNAA
ISDGLTFFVHRQDIGRHNALDKLYGFCIQRHITVRDKVLIFSGRISSEILIKAAKIGVGVILSKSAPTTLAVTLANDLNI
TAVGFIRNGGFNIYSHPERIIDSEQ
>Mature_265_residues
MNKDVSLGQPIVRYEDGKLFNTTDQYVTEFPLTIMVNGEEFATVICSPTNLEELVIGFLASEGAILKRDELKSVLIDDSK
GFAHVELNKDLGDRFQYSTKRMIASCCGKSREFYFQNDAAIAKTSMSKITLTPMQIINMMTRLQSASHIYQETGGLHNAA
ISDGLTFFVHRQDIGRHNALDKLYGFCIQRHITVRDKVLIFSGRISSEILIKAAKIGVGVILSKSAPTTLAVTLANDLNI
TAVGFIRNGGFNIYSHPERIIDSEQ

Specific function: Necessary for formate dehydrogenase activity [H]

COG id: COG1526

COG function: function code C; Uncharacterized protein required for formate dehydrogenase activity

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fdhD family [H]

Homologues:

Organism=Escherichia coli, GI1790329, Length=246, Percent_Identity=30.0813008130081, Blast_Score=92, Evalue=3e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003786 [H]

Pfam domain/function: PF02634 FdhD-NarQ [H]

EC number: NA

Molecular weight: Translated: 29416; Mature: 29416

Theoretical pI: Translated: 7.18; Mature: 7.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKDVSLGQPIVRYEDGKLFNTTDQYVTEFPLTIMVNGEEFATVICSPTNLEELVIGFLA
CCCCCCCCCCEEEECCCCEECCHHHHHHCCCEEEEECCCEEEEEEECCCCHHHHHHHHHH
SEGAILKRDELKSVLIDDSKGFAHVELNKDLGDRFQYSTKRMIASCCGKSREFYFQNDAA
CCCCEEEHHHHHHEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCC
IAKTSMSKITLTPMQIINMMTRLQSASHIYQETGGLHNAAISDGLTFFVHRQDIGRHNAL
EECCCCCEEEECHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCEEEEEEECCCCCHHHH
DKLYGFCIQRHITVRDKVLIFSGRISSEILIKAAKIGVGVILSKSAPTTLAVTLANDLNI
HHHHHHHHHHCCEEEEEEEEEECCCCCHHEEEEECCCEEEEEECCCCCEEEEEEECCCCE
TAVGFIRNGGFNIYSHPERIIDSEQ
EEEEEEECCCCCEECCCHHHCCCCC
>Mature Secondary Structure
MNKDVSLGQPIVRYEDGKLFNTTDQYVTEFPLTIMVNGEEFATVICSPTNLEELVIGFLA
CCCCCCCCCCEEEECCCCEECCHHHHHHCCCEEEEECCCEEEEEEECCCCHHHHHHHHHH
SEGAILKRDELKSVLIDDSKGFAHVELNKDLGDRFQYSTKRMIASCCGKSREFYFQNDAA
CCCCEEEHHHHHHEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCC
IAKTSMSKITLTPMQIINMMTRLQSASHIYQETGGLHNAAISDGLTFFVHRQDIGRHNAL
EECCCCCEEEECHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCEEEEEEECCCCCHHHH
DKLYGFCIQRHITVRDKVLIFSGRISSEILIKAAKIGVGVILSKSAPTTLAVTLANDLNI
HHHHHHHHHHCCEEEEEEEEEECCCCCHHEEEEECCCEEEEEECCCCCEEEEEEECCCCE
TAVGFIRNGGFNIYSHPERIIDSEQ
EEEEEEECCCCCEECCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA