| Definition | Staphylococcus aureus subsp. aureus COL chromosome, complete genome. |
|---|---|
| Accession | NC_002951 |
| Length | 2,809,422 |
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The map label for this gene is ylmA [H]
Identifier: 57652172
GI number: 57652172
Start: 2205313
End: 2206095
Strand: Reverse
Name: ylmA [H]
Synonym: SACOL2144
Alternate gene names: 57652172
Gene position: 2206095-2205313 (Counterclockwise)
Preceding gene: 57652173
Following gene: 57652171
Centisome position: 78.52
GC content: 35.5
Gene sequence:
>783_bases ATGTTAATTCAATTAGATCAAATTGGGCGAATGAAGCAAGGAAAAACAATTTTAAAAAAGATTTCTTGGCAAATTGCTAA AGGTGATAAATGGATATTATATGGGTTGAATGGTGCTGGCAAGACAACACTTCTAAATATTTTAAATGCGTATGAGCCTG CAACATCTGGAACTGTTAACCTTTTCGGTAAAATGCCAGGCAAGGTAGGGTATTCTGCAGAGACTGTACGACAACATATA GGTTTTGTATCTCATAGTTTACTGGAAAAGTTTCAAGAGGGTGAAAGAGTAATCGATGTGGTGATAAGCGGTGCCTTTAA ATCAATTGGTGTTTATCAAGATATTGATGATGAGATACGTAATGAAGCACATCAATTACTTAAATTAGTTGGAATGTCTG CTAAAGCGCAACAATATATTGGTTATTTATCTACCGGTGAAAAACAACGAGTGATGATTGCACGAGCTTTAATGGGGCAA CCCCAGGTTTTAATTTTAGATGAGCCAGCAGCTGGTTTAGACTTTATTGCACGAGAATCGTTGTTAAGTATACTTGACTC ATTGTCAGATTCATATCCAACGCTTGCGATGATTTATGTGACGCACTTTATTGAAGAAATAACTGCTAACTTTTCCAAAA TTTTACTGCTAAAAGATGGCCAAAGTATTCAACAAGGCGCTGTAGAAGACATATTAACTTCTGAAAACATGTCACGATTT TTCCAGAAAAATGTAGCAGTTCAAAGATGGAATAATCGATTTTCTATGGCAATGTTAGAGTAA
Upstream 100 bases:
>100_bases AATGAAGTGTTTTATTTATTTAAATAGTCTGACAATTAAGGGTGTTATGTTAATATGATTTTATGAGAAGTATGGAGTAG CAATAAAGGGGTGACCTCGC
Downstream 100 bases:
>100_bases ATATTTTGCAAATAATAAGTAATAATGACAAAATTTAATTAAGATAAAATGGACAGTGGAGGGCAATATAGATAACGTAA AAGCAATATTTTTGGACATG
Product: ABC transporter ATP-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 260; Mature: 260
Protein sequence:
>260_residues MLIQLDQIGRMKQGKTILKKISWQIAKGDKWILYGLNGAGKTTLLNILNAYEPATSGTVNLFGKMPGKVGYSAETVRQHI GFVSHSLLEKFQEGERVIDVVISGAFKSIGVYQDIDDEIRNEAHQLLKLVGMSAKAQQYIGYLSTGEKQRVMIARALMGQ PQVLILDEPAAGLDFIARESLLSILDSLSDSYPTLAMIYVTHFIEEITANFSKILLLKDGQSIQQGAVEDILTSENMSRF FQKNVAVQRWNNRFSMAMLE
Sequences:
>Translated_260_residues MLIQLDQIGRMKQGKTILKKISWQIAKGDKWILYGLNGAGKTTLLNILNAYEPATSGTVNLFGKMPGKVGYSAETVRQHI GFVSHSLLEKFQEGERVIDVVISGAFKSIGVYQDIDDEIRNEAHQLLKLVGMSAKAQQYIGYLSTGEKQRVMIARALMGQ PQVLILDEPAAGLDFIARESLLSILDSLSDSYPTLAMIYVTHFIEEITANFSKILLLKDGQSIQQGAVEDILTSENMSRF FQKNVAVQRWNNRFSMAMLE >Mature_260_residues MLIQLDQIGRMKQGKTILKKISWQIAKGDKWILYGLNGAGKTTLLNILNAYEPATSGTVNLFGKMPGKVGYSAETVRQHI GFVSHSLLEKFQEGERVIDVVISGAFKSIGVYQDIDDEIRNEAHQLLKLVGMSAKAQQYIGYLSTGEKQRVMIARALMGQ PQVLILDEPAAGLDFIARESLLSILDSLSDSYPTLAMIYVTHFIEEITANFSKILLLKDGQSIQQGAVEDILTSENMSRF FQKNVAVQRWNNRFSMAMLE
Specific function: Involved In The Transport Of Molybdenum Into The Cell. Involved In Photorepair. Could Act On Uv-Induced DNA Damage Other Than Pyrimidine Dimers. [C]
COG id: COG1119
COG function: function code P; ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA
Gene ontology:
Cell location: Inner Membrane-Associated [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Homo sapiens, GI27881501, Length=219, Percent_Identity=27.3972602739726, Blast_Score=79, Evalue=4e-15, Organism=Homo sapiens, GI31657092, Length=209, Percent_Identity=27.7511961722488, Blast_Score=79, Evalue=4e-15, Organism=Homo sapiens, GI30795238, Length=219, Percent_Identity=27.3972602739726, Blast_Score=79, Evalue=4e-15, Organism=Homo sapiens, GI27477115, Length=190, Percent_Identity=30, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI153792144, Length=191, Percent_Identity=29.8429319371728, Blast_Score=73, Evalue=2e-13, Organism=Homo sapiens, GI116734710, Length=204, Percent_Identity=28.921568627451, Blast_Score=72, Evalue=4e-13, Organism=Homo sapiens, GI45446740, Length=225, Percent_Identity=25.3333333333333, Blast_Score=72, Evalue=4e-13, Organism=Homo sapiens, GI47078218, Length=225, Percent_Identity=25.3333333333333, Blast_Score=72, Evalue=5e-13, Organism=Homo sapiens, GI4505771, Length=232, Percent_Identity=28.8793103448276, Blast_Score=72, Evalue=7e-13, Organism=Homo sapiens, GI9961252, Length=232, Percent_Identity=28.8793103448276, Blast_Score=71, Evalue=8e-13, Organism=Homo sapiens, GI105990541, Length=236, Percent_Identity=24.5762711864407, Blast_Score=70, Evalue=1e-12, Organism=Homo sapiens, GI46592915, Length=226, Percent_Identity=26.9911504424779, Blast_Score=69, Evalue=4e-12, Organism=Homo sapiens, GI46592898, Length=226, Percent_Identity=26.9911504424779, Blast_Score=69, Evalue=4e-12, Organism=Homo sapiens, GI46592978, Length=226, Percent_Identity=26.9911504424779, Blast_Score=69, Evalue=4e-12, Organism=Homo sapiens, GI27262624, Length=233, Percent_Identity=27.8969957081545, Blast_Score=69, Evalue=4e-12, Organism=Homo sapiens, GI27262626, Length=233, Percent_Identity=27.8969957081545, Blast_Score=69, Evalue=4e-12, Organism=Homo sapiens, GI46592971, Length=226, Percent_Identity=26.9911504424779, Blast_Score=69, Evalue=4e-12, Organism=Homo sapiens, GI46592956, Length=226, Percent_Identity=26.9911504424779, Blast_Score=69, Evalue=4e-12, Organism=Homo sapiens, GI46592964, Length=226, Percent_Identity=26.9911504424779, Blast_Score=69, Evalue=4e-12, Organism=Homo sapiens, GI215820660, Length=224, Percent_Identity=25, Blast_Score=68, Evalue=8e-12, Organism=Homo sapiens, GI20143975, Length=224, Percent_Identity=25, Blast_Score=68, Evalue=8e-12, Organism=Homo sapiens, GI171184400, Length=234, Percent_Identity=27.7777777777778, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI150417984, Length=191, Percent_Identity=28.7958115183246, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI21536376, Length=195, Percent_Identity=28.2051282051282, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI27436953, Length=179, Percent_Identity=27.9329608938547, Blast_Score=66, Evalue=2e-11, Organism=Homo sapiens, GI9961250, Length=237, Percent_Identity=27.8481012658228, Blast_Score=65, Evalue=5e-11, Organism=Homo sapiens, GI255708477, Length=232, Percent_Identity=29.3103448275862, Blast_Score=65, Evalue=6e-11, Organism=Escherichia coli, GI1786975, Length=209, Percent_Identity=34.4497607655502, Blast_Score=122, Evalue=3e-29, Organism=Escherichia coli, GI1787089, Length=237, Percent_Identity=30.379746835443, Blast_Score=100, Evalue=8e-23, Organism=Escherichia coli, GI1786319, Length=223, Percent_Identity=32.2869955156951, Blast_Score=99, Evalue=2e-22, Organism=Escherichia coli, GI87081834, Length=229, Percent_Identity=31.8777292576419, Blast_Score=99, Evalue=2e-22, Organism=Escherichia coli, GI1787105, Length=211, Percent_Identity=32.2274881516588, Blast_Score=96, Evalue=2e-21, Organism=Escherichia coli, GI1786563, Length=207, Percent_Identity=32.3671497584541, Blast_Score=96, Evalue=3e-21, Organism=Escherichia coli, GI1788225, Length=245, Percent_Identity=28.9795918367347, Blast_Score=92, Evalue=2e-20, Organism=Escherichia coli, GI1787029, Length=249, Percent_Identity=27.3092369477912, Blast_Score=91, Evalue=6e-20, Organism=Escherichia coli, GI1788761, Length=235, Percent_Identity=31.9148936170213, Blast_Score=91, Evalue=7e-20, Organism=Escherichia coli, GI1786398, Length=241, Percent_Identity=29.045643153527, Blast_Score=91, Evalue=8e-20, Organism=Escherichia coli, GI1786703, Length=219, Percent_Identity=31.5068493150685, Blast_Score=87, Evalue=1e-18, Organism=Escherichia coli, GI1786345, Length=228, Percent_Identity=27.6315789473684, Blast_Score=86, Evalue=3e-18, Organism=Escherichia coli, GI1787370, Length=234, Percent_Identity=26.9230769230769, Blast_Score=85, Evalue=5e-18, Organism=Escherichia coli, GI1789873, Length=212, Percent_Identity=29.7169811320755, Blast_Score=85, Evalue=5e-18, Organism=Escherichia coli, GI87081709, Length=242, Percent_Identity=26.4462809917355, Blast_Score=83, Evalue=2e-17, Organism=Escherichia coli, GI87081791, Length=233, Percent_Identity=28.755364806867, Blast_Score=83, Evalue=2e-17, Organism=Escherichia coli, GI1789672, Length=238, Percent_Identity=24.3697478991597, Blast_Score=80, Evalue=9e-17, Organism=Escherichia coli, GI1787712, Length=233, Percent_Identity=27.0386266094421, Blast_Score=79, Evalue=2e-16, Organism=Escherichia coli, GI1790544, Length=240, Percent_Identity=27.5, Blast_Score=78, Evalue=5e-16, Organism=Escherichia coli, GI1788897, Length=217, Percent_Identity=29.9539170506912, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI1790525, Length=242, Percent_Identity=26.4462809917355, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI1789864, Length=218, Percent_Identity=26.605504587156, Blast_Score=75, Evalue=3e-15, Organism=Escherichia coli, GI1789032, Length=219, Percent_Identity=27.8538812785388, Blast_Score=75, Evalue=4e-15, Organism=Escherichia coli, GI1787547, Length=227, Percent_Identity=27.7533039647577, Blast_Score=75, Evalue=5e-15, Organism=Escherichia coli, GI1788506, Length=248, Percent_Identity=25, Blast_Score=75, Evalue=6e-15, Organism=Escherichia coli, GI1789593, Length=232, Percent_Identity=25.8620689655172, Blast_Score=74, Evalue=7e-15, Organism=Escherichia coli, GI1786872, Length=193, Percent_Identity=26.4248704663212, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI1786803, Length=228, Percent_Identity=26.7543859649123, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI1788644, Length=251, Percent_Identity=28.6852589641434, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI1786981, Length=213, Percent_Identity=29.5774647887324, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI1789891, Length=250, Percent_Identity=24, Blast_Score=72, Evalue=3e-14, Organism=Escherichia coli, GI1788450, Length=263, Percent_Identity=24.7148288973384, Blast_Score=72, Evalue=3e-14, Organism=Escherichia coli, GI1786654, Length=235, Percent_Identity=27.2340425531915, Blast_Score=72, Evalue=4e-14, Organism=Escherichia coli, GI48995001, Length=225, Percent_Identity=25.7777777777778, Blast_Score=72, Evalue=5e-14, Organism=Escherichia coli, GI1787164, Length=209, Percent_Identity=29.6650717703349, Blast_Score=71, Evalue=9e-14, Organism=Escherichia coli, GI1786253, Length=224, Percent_Identity=23.6607142857143, Blast_Score=70, Evalue=9e-14, Organism=Escherichia coli, GI1790190, Length=220, Percent_Identity=28.6363636363636, Blast_Score=70, Evalue=1e-13, Organism=Escherichia coli, GI1789991, Length=208, Percent_Identity=28.3653846153846, Blast_Score=69, Evalue=3e-13, Organism=Escherichia coli, GI1788210, Length=223, Percent_Identity=29.1479820627803, Blast_Score=68, Evalue=6e-13, Organism=Escherichia coli, GI1790467, Length=226, Percent_Identity=27.8761061946903, Blast_Score=67, Evalue=9e-13, Organism=Escherichia coli, GI87081782, Length=216, Percent_Identity=27.3148148148148, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1788472, Length=224, Percent_Identity=25.4464285714286, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI87082268, Length=182, Percent_Identity=29.1208791208791, Blast_Score=66, Evalue=2e-12, Organism=Escherichia coli, GI48994943, Length=232, Percent_Identity=26.7241379310345, Blast_Score=66, Evalue=3e-12, Organism=Escherichia coli, GI1787113, Length=230, Percent_Identity=26.9565217391304, Blast_Score=65, Evalue=5e-12, Organism=Escherichia coli, GI1787182, Length=190, Percent_Identity=27.8947368421053, Blast_Score=64, Evalue=9e-12, Organism=Escherichia coli, GI1789962, Length=219, Percent_Identity=23.2876712328767, Blast_Score=64, Evalue=1e-11, Organism=Escherichia coli, GI1790739, Length=218, Percent_Identity=24.7706422018349, Blast_Score=64, Evalue=1e-11, Organism=Escherichia coli, GI1787112, Length=234, Percent_Identity=29.0598290598291, Blast_Score=62, Evalue=4e-11, Organism=Escherichia coli, GI48994883, Length=147, Percent_Identity=26.530612244898, Blast_Score=62, Evalue=4e-11, Organism=Escherichia coli, GI145693107, Length=235, Percent_Identity=26.3829787234043, Blast_Score=61, Evalue=9e-11, Organism=Caenorhabditis elegans, GI17569143, Length=228, Percent_Identity=29.3859649122807, Blast_Score=80, Evalue=2e-15, Organism=Caenorhabditis elegans, GI193202349, Length=236, Percent_Identity=29.2372881355932, Blast_Score=78, Evalue=6e-15, Organism=Caenorhabditis elegans, GI17569145, Length=228, Percent_Identity=30.7017543859649, Blast_Score=75, Evalue=4e-14, Organism=Caenorhabditis elegans, GI193209708, Length=228, Percent_Identity=26.3157894736842, Blast_Score=72, Evalue=2e-13, Organism=Caenorhabditis elegans, GI212646699, Length=244, Percent_Identity=25.4098360655738, Blast_Score=69, Evalue=3e-12, Organism=Caenorhabditis elegans, GI115533608, Length=175, Percent_Identity=28.5714285714286, Blast_Score=67, Evalue=1e-11, Organism=Caenorhabditis elegans, GI86563255, Length=243, Percent_Identity=25.9259259259259, Blast_Score=65, Evalue=3e-11, Organism=Caenorhabditis elegans, GI71992285, Length=244, Percent_Identity=26.2295081967213, Blast_Score=65, Evalue=3e-11, Organism=Caenorhabditis elegans, GI17558664, Length=229, Percent_Identity=28.3842794759825, Blast_Score=64, Evalue=9e-11, Organism=Saccharomyces cerevisiae, GI6324985, Length=226, Percent_Identity=28.3185840707965, Blast_Score=75, Evalue=9e-15, Organism=Saccharomyces cerevisiae, GI6320266, Length=231, Percent_Identity=24.6753246753247, Blast_Score=74, Evalue=2e-14, Organism=Saccharomyces cerevisiae, GI6319856, Length=226, Percent_Identity=26.9911504424779, Blast_Score=64, Evalue=3e-11, Organism=Saccharomyces cerevisiae, GI6321081, Length=245, Percent_Identity=24.4897959183673, Blast_Score=64, Evalue=3e-11, Organism=Drosophila melanogaster, GI24582014, Length=200, Percent_Identity=31.5, Blast_Score=85, Evalue=6e-17, Organism=Drosophila melanogaster, GI24582012, Length=200, Percent_Identity=31.5, Blast_Score=85, Evalue=6e-17, Organism=Drosophila melanogaster, GI28574150, Length=213, Percent_Identity=28.169014084507, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI116007328, Length=213, Percent_Identity=28.169014084507, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI221500365, Length=243, Percent_Identity=27.1604938271605, Blast_Score=75, Evalue=3e-14, Organism=Drosophila melanogaster, GI116007184, Length=243, Percent_Identity=27.1604938271605, Blast_Score=75, Evalue=3e-14, Organism=Drosophila melanogaster, GI85725262, Length=226, Percent_Identity=30.0884955752212, Blast_Score=75, Evalue=4e-14, Organism=Drosophila melanogaster, GI281363262, Length=222, Percent_Identity=30.1801801801802, Blast_Score=75, Evalue=6e-14, Organism=Drosophila melanogaster, GI24653245, Length=222, Percent_Identity=30.1801801801802, Blast_Score=75, Evalue=6e-14, Organism=Drosophila melanogaster, GI24643674, Length=227, Percent_Identity=26.431718061674, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI19920532, Length=224, Percent_Identity=29.0178571428571, Blast_Score=71, Evalue=7e-13, Organism=Drosophila melanogaster, GI24580930, Length=224, Percent_Identity=29.0178571428571, Blast_Score=71, Evalue=7e-13, Organism=Drosophila melanogaster, GI28574744, Length=222, Percent_Identity=28.3783783783784, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI24650853, Length=199, Percent_Identity=28.643216080402, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI24650855, Length=199, Percent_Identity=28.643216080402, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI24659289, Length=246, Percent_Identity=24.7967479674797, Blast_Score=69, Evalue=4e-12, Organism=Drosophila melanogaster, GI221512771, Length=216, Percent_Identity=28.2407407407407, Blast_Score=68, Evalue=5e-12, Organism=Drosophila melanogaster, GI24666092, Length=215, Percent_Identity=26.9767441860465, Blast_Score=68, Evalue=7e-12, Organism=Drosophila melanogaster, GI281362751, Length=199, Percent_Identity=28.643216080402, Blast_Score=67, Evalue=8e-12, Organism=Drosophila melanogaster, GI23397593, Length=241, Percent_Identity=29.8755186721992, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI17647959, Length=247, Percent_Identity=26.3157894736842, Blast_Score=65, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: NA
Molecular weight: Translated: 29006; Mature: 29006
Theoretical pI: Translated: 7.80; Mature: 7.80
Prosite motif: PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLIQLDQIGRMKQGKTILKKISWQIAKGDKWILYGLNGAGKTTLLNILNAYEPATSGTVN CEEECHHHCCHHHHHHHHHHHHHHEECCCEEEEEEECCCCHHHHHHHHHHCCCCCCCCEE LFGKMPGKVGYSAETVRQHIGFVSHSLLEKFQEGERVIDVVISGAFKSIGVYQDIDDEIR EEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH NEAHQLLKLVGMSAKAQQYIGYLSTGEKQRVMIARALMGQPQVLILDEPAAGLDFIARES HHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHH LLSILDSLSDSYPTLAMIYVTHFIEEITANFSKILLLKDGQSIQQGAVEDILTSENMSRF HHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHEEEEEECCCHHHHHHHHHHHHHHHHHHH FQKNVAVQRWNNRFSMAMLE HHHHHHHHHHCCCEEEEECC >Mature Secondary Structure MLIQLDQIGRMKQGKTILKKISWQIAKGDKWILYGLNGAGKTTLLNILNAYEPATSGTVN CEEECHHHCCHHHHHHHHHHHHHHEECCCEEEEEEECCCCHHHHHHHHHHCCCCCCCCEE LFGKMPGKVGYSAETVRQHIGFVSHSLLEKFQEGERVIDVVISGAFKSIGVYQDIDDEIR EEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH NEAHQLLKLVGMSAKAQQYIGYLSTGEKQRVMIARALMGQPQVLILDEPAAGLDFIARES HHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHH LLSILDSLSDSYPTLAMIYVTHFIEEITANFSKILLLKDGQSIQQGAVEDILTSENMSRF HHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHEEEEEECCCHHHHHHHHHHHHHHHHHHH FQKNVAVQRWNNRFSMAMLE HHHHHHHHHHCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]