Definition | Staphylococcus aureus subsp. aureus COL chromosome, complete genome. |
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Accession | NC_002951 |
Length | 2,809,422 |
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The map label for this gene is ybgL [C]
Identifier: 57651996
GI number: 57651996
Start: 1689247
End: 1689999
Strand: Reverse
Name: ybgL [C]
Synonym: SACOL1660
Alternate gene names: 57651996
Gene position: 1689999-1689247 (Counterclockwise)
Preceding gene: 57651997
Following gene: 57651995
Centisome position: 60.15
GC content: 34.93
Gene sequence:
>753_bases ATGCGAGTTGATTTGAATTGTGATTTAGGCGAAGCATTTGGAAATTATTCCTTTGGTGGTGATCATCAAATTATTCCGTT AATTACAAGTGCGAATGTTGCTTGTGGTTTTCACGCTGGTGATGAAAATGTAATGAATGAAACGGTAAAACTTGCCAAAG CACATAATGTTGCAGTAGGTGCACATCCTGGTTTACCTGATTTGAAAGGCTTTGGCAGACGAAATATAGATATCTCTAAC GACGAGATTTATAATTTGATGATTTATCAATTAGGTGCATTACAAGGGTTTTGTCGCATTCATCAAGTTAAAATTAATCA TGTTAAACCGCATGGTGCATTGTATCAGATGGGTGCAAAAGACAGAGAAATAGCAAACGTTATAGCACAAGCTGTTTATG ACTTTGATCCATCACTAGTGTTAGTAGGATTAGCAAATTCATATCTAATTTCAGAAGCAAAGAATGTCGGATTAATTACA GCTTCTGAAGTGTTTGCTGATAGACGATACGAAGATGATGGGCAGCTCGTTAGTAGAAAAGAAAGTGATGCTGTGATTAC TGATACTGACGAAGCACTTAAGCAGGTTTTAAAGATGGTGAAGGAAAATAAAGTTATTTCAAAAAACAATAAGGAAGTAA CGTTACAAGCAGATACAATTTGTGTGCATGGTGATGGAGAACATGCATTATTATTTGTTTCGAAAATTAGAGAAATTTTA ATGAAAGAAGGCATTGATATTCAATCCTTATAG
Upstream 100 bases:
>100_bases ATGCAGTTTTAAATTATCCACTATATCGTGATGGAGATGCAAAAGATGTTGATATTAAATTTTTAGAAAAACATCAAATT GTTAAAGGGGTGGAATTATA
Downstream 100 bases:
>100_bases GGGGCTAAAAAAATGGGGAGAAATTTAAAGCTTAAAAAAGAAAGTGACTTTGAATTCACAAAAAATCATAAAAGGTTATT ATTAGGTTCTGTATTTTTGA
Product: LamB/YcsF family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 250; Mature: 250
Protein sequence:
>250_residues MRVDLNCDLGEAFGNYSFGGDHQIIPLITSANVACGFHAGDENVMNETVKLAKAHNVAVGAHPGLPDLKGFGRRNIDISN DEIYNLMIYQLGALQGFCRIHQVKINHVKPHGALYQMGAKDREIANVIAQAVYDFDPSLVLVGLANSYLISEAKNVGLIT ASEVFADRRYEDDGQLVSRKESDAVITDTDEALKQVLKMVKENKVISKNNKEVTLQADTICVHGDGEHALLFVSKIREIL MKEGIDIQSL
Sequences:
>Translated_250_residues MRVDLNCDLGEAFGNYSFGGDHQIIPLITSANVACGFHAGDENVMNETVKLAKAHNVAVGAHPGLPDLKGFGRRNIDISN DEIYNLMIYQLGALQGFCRIHQVKINHVKPHGALYQMGAKDREIANVIAQAVYDFDPSLVLVGLANSYLISEAKNVGLIT ASEVFADRRYEDDGQLVSRKESDAVITDTDEALKQVLKMVKENKVISKNNKEVTLQADTICVHGDGEHALLFVSKIREIL MKEGIDIQSL >Mature_250_residues MRVDLNCDLGEAFGNYSFGGDHQIIPLITSANVACGFHAGDENVMNETVKLAKAHNVAVGAHPGLPDLKGFGRRNIDISN DEIYNLMIYQLGALQGFCRIHQVKINHVKPHGALYQMGAKDREIANVIAQAVYDFDPSLVLVGLANSYLISEAKNVGLIT ASEVFADRRYEDDGQLVSRKESDAVITDTDEALKQVLKMVKENKVISKNNKEVTLQADTICVHGDGEHALLFVSKIREIL MKEGIDIQSL
Specific function: Unknown
COG id: COG1540
COG function: function code R; Uncharacterized proteins, homologs of lactam utilization protein B
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0271 (lamB) family [H]
Homologues:
Organism=Escherichia coli, GI1786931, Length=245, Percent_Identity=45.7142857142857, Blast_Score=235, Evalue=2e-63,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011330 - InterPro: IPR005501 [H]
Pfam domain/function: PF03746 LamB_YcsF [H]
EC number: NA
Molecular weight: Translated: 27449; Mature: 27449
Theoretical pI: Translated: 5.56; Mature: 5.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVDLNCDLGEAFGNYSFGGDHQIIPLITSANVACGFHAGDENVMNETVKLAKAHNVAVG CEEECCCCHHHHCCCCCCCCCCEEEEEEECCCEEEEEECCCHHHHHHHHHHHHHCCEEEE AHPGLPDLKGFGRRNIDISNDEIYNLMIYQLGALQGFCRIHQVKINHVKPHGALYQMGAK CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEEEEEEEEECCCCCEEECCCC DREIANVIAQAVYDFDPSLVLVGLANSYLISEAKNVGLITASEVFADRRYEDDGQLVSRK HHHHHHHHHHHHHCCCCCEEEEECCCHHHHHCCCCCCEEEHHHHHHCCCCCCCCCEECCC ESDAVITDTDEALKQVLKMVKENKVISKNNKEVTLQADTICVHGDGEHALLFVSKIREIL CCCEEEECCHHHHHHHHHHHHCCCEECCCCCEEEEEEEEEEEECCCCEEEHHHHHHHHHH MKEGIDIQSL HHCCCCCCCC >Mature Secondary Structure MRVDLNCDLGEAFGNYSFGGDHQIIPLITSANVACGFHAGDENVMNETVKLAKAHNVAVG CEEECCCCHHHHCCCCCCCCCCEEEEEEECCCEEEEEECCCHHHHHHHHHHHHHCCEEEE AHPGLPDLKGFGRRNIDISNDEIYNLMIYQLGALQGFCRIHQVKINHVKPHGALYQMGAK CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEEEEEEEEECCCCCEEECCCC DREIANVIAQAVYDFDPSLVLVGLANSYLISEAKNVGLITASEVFADRRYEDDGQLVSRK HHHHHHHHHHHHHCCCCCEEEEECCCHHHHHCCCCCCEEEHHHHHHCCCCCCCCCEECCC ESDAVITDTDEALKQVLKMVKENKVISKNNKEVTLQADTICVHGDGEHALLFVSKIREIL CCCEEEECCHHHHHHHHHHHHCCCEECCCCCEEEEEEEEEEEECCCCEEEHHHHHHHHHH MKEGIDIQSL HHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11418146 [H]