Definition | Staphylococcus aureus subsp. aureus COL chromosome, complete genome. |
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Accession | NC_002951 |
Length | 2,809,422 |
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The map label for this gene is lysC [H]
Identifier: 57651893
GI number: 57651893
Start: 1440601
End: 1441806
Strand: Direct
Name: lysC [H]
Synonym: SACOL1428
Alternate gene names: 57651893
Gene position: 1440601-1441806 (Clockwise)
Preceding gene: 57651892
Following gene: 57651894
Centisome position: 51.28
GC content: 34.49
Gene sequence:
>1206_bases ATGGTAACAAGAAGTGTGTTGAAATTTGGCGGATCATCCGTCAGTGATTTTACAAAATTAAAAAGGATCGCTGAAATGTT AAAGGAGCGAGTCAATCAAGATGAACAATTAATTGTCGTTGTAAGTGCTATGGGTAACACAACAGATCAATTAATGACGA ATGTATCAACCTTGACTAAAGCACCAAAACAACAAGAACTGGCATTATTATTGACAACCGGAGAGCAACAAACTGTATCT TATTTATCAATGGTATTAAATGATATCGGTATGAATGCCAAAGCAATGACTGGCTATCAAGCGGGTATTAAAACCATTGG CCATCATTTAAAAAGTAAAATTGCTCAAATTAATCCTCAAACATTTGAACAAGCCTTTCAAGAAAACGATATTTTAGTAG TTGCTGGATTTCAAGGCATCAATGAACATCAGGAATTAACAACTTTAGGCAGAGGTGGTTCTGATACGACCGCTGTGGCA CTTGCTGTTAGTAATCAAATACCTTGTGAAATTTATACCGACGTTGATGGTGTGTATGCCACTGACCCAAGACTTTTACC AAAGGCTAAACGACTAGACATCGTCTCATATGAAGAAATGATGGAAATGAGCGCTTTAGGTGCTGGTGTACTTGAAACAA GAAGTGTTGAATTAGCTAAAAACTATAATATCCCTTTATATTTAGGAAAAACTTTATCGAACGTGAAAGGAACATGGATT ATGTCAAATGAAGAAATATTAGAGAAAAAAGCAGTTACTGGTGTGGCTTTGGATAAACATATGATGCATGTAACAATTAG TTATCCCCTACCTGACAATCAGCTACTTACCCAACTATTTACGGAACTTGAAGAAGGTGCTGTAAATGTTGATATGATTT CACAAATCGTCAACTTGGATGGGCTACAACTATCCTTCACGATTAAAGATAGTGATTTTCATCAAATTTCTATGATTCTT GAAACATTAAAGAATCAATATGAAGCATTAGCTTATAAAATCAATGAGCATTATGTCAAAATTTCATTAATTGGCTCAGG CATGCGTGATATGTCAGGTGTGGCATCAAAAGCATTTTTGACATTAATTGAAAATAATATACCTTTCTACCAAACAACAA CATCTGAAATAAGTATTTCATACGTCATTGATGATTTTAATGGGCAACAAGCGGTAGAAAAACTATATGACGCATTTAAC ATTTAA
Upstream 100 bases:
>100_bases ATGGAGTGCATCACTTGTATATAGATTAAGAGCAAGTTCGCATTCCGAACTTGTTCTTTTTTTATTATTGTGTGCCCTTC CTAACAATTAGGAGGATTAT
Downstream 100 bases:
>100_bases TGGTAAAATGATTGTTAAAATATTCTAAAAATTGGAAATTATTATAAAATGGAGTGACAAGTTATGACAAAGTTAGCAGT TGTGGGTGCAACAGGATTAG
Product: aspartate kinase
Products: NA
Alternate protein names: Aspartate kinase 2; Aspartokinase II [H]
Number of amino acids: Translated: 401; Mature: 401
Protein sequence:
>401_residues MVTRSVLKFGGSSVSDFTKLKRIAEMLKERVNQDEQLIVVVSAMGNTTDQLMTNVSTLTKAPKQQELALLLTTGEQQTVS YLSMVLNDIGMNAKAMTGYQAGIKTIGHHLKSKIAQINPQTFEQAFQENDILVVAGFQGINEHQELTTLGRGGSDTTAVA LAVSNQIPCEIYTDVDGVYATDPRLLPKAKRLDIVSYEEMMEMSALGAGVLETRSVELAKNYNIPLYLGKTLSNVKGTWI MSNEEILEKKAVTGVALDKHMMHVTISYPLPDNQLLTQLFTELEEGAVNVDMISQIVNLDGLQLSFTIKDSDFHQISMIL ETLKNQYEALAYKINEHYVKISLIGSGMRDMSGVASKAFLTLIENNIPFYQTTTSEISISYVIDDFNGQQAVEKLYDAFN I
Sequences:
>Translated_401_residues MVTRSVLKFGGSSVSDFTKLKRIAEMLKERVNQDEQLIVVVSAMGNTTDQLMTNVSTLTKAPKQQELALLLTTGEQQTVS YLSMVLNDIGMNAKAMTGYQAGIKTIGHHLKSKIAQINPQTFEQAFQENDILVVAGFQGINEHQELTTLGRGGSDTTAVA LAVSNQIPCEIYTDVDGVYATDPRLLPKAKRLDIVSYEEMMEMSALGAGVLETRSVELAKNYNIPLYLGKTLSNVKGTWI MSNEEILEKKAVTGVALDKHMMHVTISYPLPDNQLLTQLFTELEEGAVNVDMISQIVNLDGLQLSFTIKDSDFHQISMIL ETLKNQYEALAYKINEHYVKISLIGSGMRDMSGVASKAFLTLIENNIPFYQTTTSEISISYVIDDFNGQQAVEKLYDAFN I >Mature_401_residues MVTRSVLKFGGSSVSDFTKLKRIAEMLKERVNQDEQLIVVVSAMGNTTDQLMTNVSTLTKAPKQQELALLLTTGEQQTVS YLSMVLNDIGMNAKAMTGYQAGIKTIGHHLKSKIAQINPQTFEQAFQENDILVVAGFQGINEHQELTTLGRGGSDTTAVA LAVSNQIPCEIYTDVDGVYATDPRLLPKAKRLDIVSYEEMMEMSALGAGVLETRSVELAKNYNIPLYLGKTLSNVKGTWI MSNEEILEKKAVTGVALDKHMMHVTISYPLPDNQLLTQLFTELEEGAVNVDMISQIVNLDGLQLSFTIKDSDFHQISMIL ETLKNQYEALAYKINEHYVKISLIGSGMRDMSGVASKAFLTLIENNIPFYQTTTSEISISYVIDDFNGQQAVEKLYDAFN I
Specific function: Catalyzes 2 nonconsecutive reactions in the common biosynthetic pathway leading from Asp to diaminopimelate and Lys, to Met, and to Thr and Ile. [C]
COG id: COG0527
COG function: function code E; Aspartokinases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 ACT domains [H]
Homologues:
Organism=Escherichia coli, GI1786183, Length=450, Percent_Identity=27.3333333333333, Blast_Score=135, Evalue=3e-33, Organism=Escherichia coli, GI1790455, Length=272, Percent_Identity=27.2058823529412, Blast_Score=89, Evalue=3e-19, Organism=Saccharomyces cerevisiae, GI6320893, Length=372, Percent_Identity=25, Blast_Score=82, Evalue=2e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002912 - InterPro: IPR001048 - InterPro: IPR005260 - InterPro: IPR001341 - InterPro: IPR018042 [H]
Pfam domain/function: PF00696 AA_kinase; PF01842 ACT [H]
EC number: =2.7.2.4 [H]
Molecular weight: Translated: 44376; Mature: 44376
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: PS00324 ASPARTOKINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVTRSVLKFGGSSVSDFTKLKRIAEMLKERVNQDEQLIVVVSAMGNTTDQLMTNVSTLTK CCCHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCHHHHHHHHHHHHC APKQQELALLLTTGEQQTVSYLSMVLNDIGMNAKAMTGYQAGIKTIGHHLKSKIAQINPQ CCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHH TFEQAFQENDILVVAGFQGINEHQELTTLGRGGSDTTAVALAVSNQIPCEIYTDVDGVYA HHHHHHCCCCEEEEECCCCCCHHHHHHHHCCCCCCCEEEEEEECCCCCEEEEECCCCEEE TDPRLLPKAKRLDIVSYEEMMEMSALGAGVLETRSVELAKNYNIPLYLGKTLSNVKGTWI CCCCCCCCHHHCCEECHHHHHHHHHHCCCHHHCCCEEHHHCCCCEEEECCHHCCCCCEEE MSNEEILEKKAVTGVALDKHMMHVTISYPLPDNQLLTQLFTELEEGAVNVDMISQIVNLD ECCHHHHHHHHHHHHEECCEEEEEEEECCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCC GLQLSFTIKDSDFHQISMILETLKNQYEALAYKINEHYVKISLIGSGMRDMSGVASKAFL CEEEEEEEECCCHHHHHHHHHHHHHHHHHHHEEECCEEEEEEEECCCCHHHHHHHHHHHH TLIENNIPFYQTTTSEISISYVIDDFNGQQAVEKLYDAFNI HHHHCCCCCEEECCCCEEEEEEEECCCCHHHHHHHHHHHCC >Mature Secondary Structure MVTRSVLKFGGSSVSDFTKLKRIAEMLKERVNQDEQLIVVVSAMGNTTDQLMTNVSTLTK CCCHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCHHHHHHHHHHHHC APKQQELALLLTTGEQQTVSYLSMVLNDIGMNAKAMTGYQAGIKTIGHHLKSKIAQINPQ CCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHH TFEQAFQENDILVVAGFQGINEHQELTTLGRGGSDTTAVALAVSNQIPCEIYTDVDGVYA HHHHHHCCCCEEEEECCCCCCHHHHHHHHCCCCCCCEEEEEEECCCCCEEEEECCCCEEE TDPRLLPKAKRLDIVSYEEMMEMSALGAGVLETRSVELAKNYNIPLYLGKTLSNVKGTWI CCCCCCCCHHHCCEECHHHHHHHHHHCCCHHHCCCEEHHHCCCCEEEECCHHCCCCCEEE MSNEEILEKKAVTGVALDKHMMHVTISYPLPDNQLLTQLFTELEEGAVNVDMISQIVNLD ECCHHHHHHHHHHHHEECCEEEEEEEECCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCC GLQLSFTIKDSDFHQISMILETLKNQYEALAYKINEHYVKISLIGSGMRDMSGVASKAFL CEEEEEEEECCCHHHHHHHHHHHHHHHHHHHEEECCEEEEEEEECCCCHHHHHHHHHHHH TLIENNIPFYQTTTSEISISYVIDDFNGQQAVEKLYDAFNI HHHHCCCCCEEECCCCEEEEEEEECCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1444390 [H]