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The map label for this gene is glpD

Identifier: 57651870

GI number: 57651870

Start: 1338709

End: 1340382

Strand: Direct

Name: glpD

Synonym: SACOL1321

Alternate gene names: 57651870

Gene position: 1338709-1340382 (Clockwise)

Preceding gene: 57651869

Following gene: 57651871

Centisome position: 47.65

GC content: 34.17

Gene sequence:

>1674_bases
ATGGCATTGTCTACTTTTAAGAGAGAACATATTAAAAAGAATTTAAGAAATGATGAATATGATTTAGTAATTATTGGTGG
CGGTATTACAGGTGCAGGTATTGCACTAGACGCGAGTGAAAGAGGAATGAAAGTTGCATTAGTTGAAATGCAAGACTTTG
CACAAGGAACAAGCTCAAGATCTACAAAATTAGTCCATGGTGGTTTGCGTTACTTAAAACAATTCCAAATTGGAGTAGTT
GCCGAAACTGGTAAAGAACGTGCGATTGTTTATGAAAATGGGCCTCATGTTACGACTCCAGAGTGGATGCTTTTACCAAT
GCATAAAGGTGGAACATTTGGTAAATTCTCAACATCAATTGGTTTAGGAATGTATGATCGTTTAGCAGGTGTTAAGAAGT
CTGAACGTAAAAAAATGTTATCTAAAAAAGAAACTTTAGCTAAAGAACCATTAGTTAAAAAAGAAGGTCTAAAAGGCGGC
GGTTACTATGTTGAATATCGTACTGACGATGCGCGTTTAACTATTGAAGTTATGAAGCGTGCTGCTGAAAAAGGCGCAGA
AATTATCAACTATACTAAATCTGAACACTTCACTTATGATAAAAATCAACAAGTAAATGGTGTTAAAGTTATAGATAAAT
TAACTAATGAAAATTATACAATTAAGGCTAAAAAAGTGGTTAATGCAGCAGGTCCATGGGTTGATGATGTTAGAAGTGGT
GATTATGCACGCAATAATAAAAAATTACGTTTAACTAAAGGTGTACATGTTGTTATTGATCAATCAAAATTCCCATTAGG
TCAAGCAGTATACTTTGATACTGAAAAAGATGGAAGAATGATTTTTGCAATTCCACGTGAAGGAAAAGCGTATGTAGGTA
CTACAGATACATTCTATGACAATATCAAATCTTCACCATTAACTACACAAGAAGACAGAGACTATTTAATCGATGCGATT
AATTACATGTTCCCTAGTGTTAATGTTACAGATGAAGATATTGAATCAACATGGGCAGGAATTAGACCATTAATTTACGA
AGAAGGCAAAGACCCTTCTGAAATCTCTCGTAAGGATGAAATTTGGGAAGGTAAATCAGGTTTATTAACTATTGCAGGTG
GTAAATTAACAGGCTATCGTCACATGGCTCAAGACATTGTTGATTTAGTATCTAAACGCTTGAAAAAAGACTACGGTTTA
ACATTTAGTCCATGTAATACAAAAGGTCTGGCAATTTCAGGTGGCGATGTAGGTGGTAGCAAGAACTTTGATGCGTTTGT
AGAGCAAAAAGTAGATGTAGCTAAAGGATTCGGCATTGATGAAGATGTTGCAAGACGTTTAGCATCTAAATATGGTTCAA
ATGTTGATGAATTGTTCAACATTGCGCAAACATCTCAATACCATGATAGCAAGTTACCATTAGAAATTTATGTAGAACTT
GTTTATAGTATTCAACAAGAAATGGTATACAAACCTAACGATTTCTTAGTTCGTCGTTCTGGTAAAATGTATTTCAATAT
TAAAGATGTATTAGATTATAAAGATGCTGTCATCGATATTATGGCAGATATGCTTGATTACTCTCCAGCTCAAATTGAAG
CATATACTGAAGAAGTTGAGCAAGCAATTAAAGAAGCGCAACATGGAAATAATCAACCAGCAGTTAAAGAATAA

Upstream 100 bases:

>100_bases
TGAATCGAGAAGCGAGAGATTTGTTCGAACATGTACAATTGAAGGATTGTTTATGTGGGACAAGTCTCTCGTTTTTACAT
TTTTTAGGAGGCGTTTTGGA

Downstream 100 bases:

>100_bases
TTAATTTGTACAATCATAAACTGGTGTCCTGTTTTAAGGGCATCAGTTTTTTTATACGAGATACATTAGTCAATTGAAAC
TATGCATCACTAAATGTATG

Product: aerobic glycerol-3-phosphate dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 557; Mature: 556

Protein sequence:

>557_residues
MALSTFKREHIKKNLRNDEYDLVIIGGGITGAGIALDASERGMKVALVEMQDFAQGTSSRSTKLVHGGLRYLKQFQIGVV
AETGKERAIVYENGPHVTTPEWMLLPMHKGGTFGKFSTSIGLGMYDRLAGVKKSERKKMLSKKETLAKEPLVKKEGLKGG
GYYVEYRTDDARLTIEVMKRAAEKGAEIINYTKSEHFTYDKNQQVNGVKVIDKLTNENYTIKAKKVVNAAGPWVDDVRSG
DYARNNKKLRLTKGVHVVIDQSKFPLGQAVYFDTEKDGRMIFAIPREGKAYVGTTDTFYDNIKSSPLTTQEDRDYLIDAI
NYMFPSVNVTDEDIESTWAGIRPLIYEEGKDPSEISRKDEIWEGKSGLLTIAGGKLTGYRHMAQDIVDLVSKRLKKDYGL
TFSPCNTKGLAISGGDVGGSKNFDAFVEQKVDVAKGFGIDEDVARRLASKYGSNVDELFNIAQTSQYHDSKLPLEIYVEL
VYSIQQEMVYKPNDFLVRRSGKMYFNIKDVLDYKDAVIDIMADMLDYSPAQIEAYTEEVEQAIKEAQHGNNQPAVKE

Sequences:

>Translated_557_residues
MALSTFKREHIKKNLRNDEYDLVIIGGGITGAGIALDASERGMKVALVEMQDFAQGTSSRSTKLVHGGLRYLKQFQIGVV
AETGKERAIVYENGPHVTTPEWMLLPMHKGGTFGKFSTSIGLGMYDRLAGVKKSERKKMLSKKETLAKEPLVKKEGLKGG
GYYVEYRTDDARLTIEVMKRAAEKGAEIINYTKSEHFTYDKNQQVNGVKVIDKLTNENYTIKAKKVVNAAGPWVDDVRSG
DYARNNKKLRLTKGVHVVIDQSKFPLGQAVYFDTEKDGRMIFAIPREGKAYVGTTDTFYDNIKSSPLTTQEDRDYLIDAI
NYMFPSVNVTDEDIESTWAGIRPLIYEEGKDPSEISRKDEIWEGKSGLLTIAGGKLTGYRHMAQDIVDLVSKRLKKDYGL
TFSPCNTKGLAISGGDVGGSKNFDAFVEQKVDVAKGFGIDEDVARRLASKYGSNVDELFNIAQTSQYHDSKLPLEIYVEL
VYSIQQEMVYKPNDFLVRRSGKMYFNIKDVLDYKDAVIDIMADMLDYSPAQIEAYTEEVEQAIKEAQHGNNQPAVKE
>Mature_556_residues
ALSTFKREHIKKNLRNDEYDLVIIGGGITGAGIALDASERGMKVALVEMQDFAQGTSSRSTKLVHGGLRYLKQFQIGVVA
ETGKERAIVYENGPHVTTPEWMLLPMHKGGTFGKFSTSIGLGMYDRLAGVKKSERKKMLSKKETLAKEPLVKKEGLKGGG
YYVEYRTDDARLTIEVMKRAAEKGAEIINYTKSEHFTYDKNQQVNGVKVIDKLTNENYTIKAKKVVNAAGPWVDDVRSGD
YARNNKKLRLTKGVHVVIDQSKFPLGQAVYFDTEKDGRMIFAIPREGKAYVGTTDTFYDNIKSSPLTTQEDRDYLIDAIN
YMFPSVNVTDEDIESTWAGIRPLIYEEGKDPSEISRKDEIWEGKSGLLTIAGGKLTGYRHMAQDIVDLVSKRLKKDYGLT
FSPCNTKGLAISGGDVGGSKNFDAFVEQKVDVAKGFGIDEDVARRLASKYGSNVDELFNIAQTSQYHDSKLPLEIYVELV
YSIQQEMVYKPNDFLVRRSGKMYFNIKDVLDYKDAVIDIMADMLDYSPAQIEAYTEEVEQAIKEAQHGNNQPAVKE

Specific function: Conversion Of Glycerol 3-Phosphate To Dihydroxyacetone. Uses Molecular Oxygen Or Nitrate As Electron Acceptor. [C]

COG id: COG0578

COG function: function code C; Glycerol-3-phosphate dehydrogenase

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family

Homologues:

Organism=Homo sapiens, GI285002233, Length=545, Percent_Identity=32.1100917431193, Blast_Score=266, Evalue=3e-71,
Organism=Homo sapiens, GI285002231, Length=545, Percent_Identity=32.1100917431193, Blast_Score=266, Evalue=3e-71,
Organism=Escherichia coli, GI2367226, Length=481, Percent_Identity=29.9376299376299, Blast_Score=180, Evalue=2e-46,
Organism=Escherichia coli, GI1788574, Length=398, Percent_Identity=27.1356783919598, Blast_Score=95, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI17509253, Length=564, Percent_Identity=33.1560283687943, Blast_Score=252, Evalue=3e-67,
Organism=Caenorhabditis elegans, GI115534726, Length=571, Percent_Identity=32.0490367775832, Blast_Score=248, Evalue=9e-66,
Organism=Saccharomyces cerevisiae, GI6322036, Length=592, Percent_Identity=30.5743243243243, Blast_Score=229, Evalue=1e-60,
Organism=Drosophila melanogaster, GI161077125, Length=565, Percent_Identity=32.7433628318584, Blast_Score=253, Evalue=2e-67,
Organism=Drosophila melanogaster, GI24653942, Length=565, Percent_Identity=32.7433628318584, Blast_Score=253, Evalue=2e-67,
Organism=Drosophila melanogaster, GI24653944, Length=565, Percent_Identity=32.7433628318584, Blast_Score=253, Evalue=2e-67,
Organism=Drosophila melanogaster, GI20130025, Length=565, Percent_Identity=32.7433628318584, Blast_Score=253, Evalue=2e-67,
Organism=Drosophila melanogaster, GI24586295, Length=553, Percent_Identity=29.6564195298373, Blast_Score=203, Evalue=2e-52,
Organism=Drosophila melanogaster, GI19921278, Length=546, Percent_Identity=28.3882783882784, Blast_Score=163, Evalue=3e-40,
Organism=Drosophila melanogaster, GI45550977, Length=392, Percent_Identity=26.7857142857143, Blast_Score=100, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GLPD_STAA3 (Q2FHD8)

Other databases:

- EMBL:   CP000255
- RefSeq:   YP_493890.1
- ProteinModelPortal:   Q2FHD8
- SMR:   Q2FHD8
- STRING:   Q2FHD8
- EnsemblBacteria:   EBSTAT00000037962
- GeneID:   3914295
- GenomeReviews:   CP000255_GR
- KEGG:   saa:SAUSA300_1193
- eggNOG:   COG0578
- GeneTree:   EBGT00050000025327
- HOGENOM:   HBG720894
- OMA:   WQVPYYW
- ProtClustDB:   CLSK872929
- InterPro:   IPR006076
- InterPro:   IPR000447
- PRINTS:   PR01001

Pfam domain/function: PF01266 DAO

EC number: =1.1.5.3

Molecular weight: Translated: 62389; Mature: 62257

Theoretical pI: Translated: 7.04; Mature: 7.04

Prosite motif: PS00977 FAD_G3PDH_1; PS00978 FAD_G3PDH_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALSTFKREHIKKNLRNDEYDLVIIGGGITGAGIALDASERGMKVALVEMQDFAQGTSSR
CCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEECCCCCCEEEEEEHHHHHCCCCCC
STKLVHGGLRYLKQFQIGVVAETGKERAIVYENGPHVTTPEWMLLPMHKGGTFGKFSTSI
CHHHHHHHHHHHHHHHCEEEEECCCCEEEEEECCCCCCCCCEEEEEECCCCCCCEEHHHC
GLGMYDRLAGVKKSERKKMLSKKETLAKEPLVKKEGLKGGGYYVEYRTDDARLTIEVMKR
CCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHCCCCCCCEEEEEECCCCEEHHHHHHH
AAEKGAEIINYTKSEHFTYDKNQQVNGVKVIDKLTNENYTIKAKKVVNAAGPWVDDVRSG
HHHCCCHHHCCCCCCCEECCCCCCCCHHHHHHHHCCCCEEEEEHHHHCCCCCCHHHHCCC
DYARNNKKLRLTKGVHVVIDQSKFPLGQAVYFDTEKDGRMIFAIPREGKAYVGTTDTFYD
CCCCCCCEEEEECCEEEEEECCCCCCCCEEEEECCCCCEEEEEECCCCCEEECCCHHHHH
NIKSSPLTTQEDRDYLIDAINYMFPSVNVTDEDIESTWAGIRPLIYEEGKDPSEISRKDE
HCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCEECCCCCHHHHHHHHH
IWEGKSGLLTIAGGKLTGYRHMAQDIVDLVSKRLKKDYGLTFSPCNTKGLAISGGDVGGS
HCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEECCCCCCC
KNFDAFVEQKVDVAKGFGIDEDVARRLASKYGSNVDELFNIAQTSQYHDSKLPLEIYVEL
CCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCHHHHHHH
VYSIQQEMVYKPNDFLVRRSGKMYFNIKDVLDYKDAVIDIMADMLDYSPAQIEAYTEEVE
HHHHHHHHCCCCCCEEEEECCCEEEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
QAIKEAQHGNNQPAVKE
HHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
ALSTFKREHIKKNLRNDEYDLVIIGGGITGAGIALDASERGMKVALVEMQDFAQGTSSR
CCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEECCCCCCEEEEEEHHHHHCCCCCC
STKLVHGGLRYLKQFQIGVVAETGKERAIVYENGPHVTTPEWMLLPMHKGGTFGKFSTSI
CHHHHHHHHHHHHHHHCEEEEECCCCEEEEEECCCCCCCCCEEEEEECCCCCCCEEHHHC
GLGMYDRLAGVKKSERKKMLSKKETLAKEPLVKKEGLKGGGYYVEYRTDDARLTIEVMKR
CCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHCCCCCCCEEEEEECCCCEEHHHHHHH
AAEKGAEIINYTKSEHFTYDKNQQVNGVKVIDKLTNENYTIKAKKVVNAAGPWVDDVRSG
HHHCCCHHHCCCCCCCEECCCCCCCCHHHHHHHHCCCCEEEEEHHHHCCCCCCHHHHCCC
DYARNNKKLRLTKGVHVVIDQSKFPLGQAVYFDTEKDGRMIFAIPREGKAYVGTTDTFYD
CCCCCCCEEEEECCEEEEEECCCCCCCCEEEEECCCCCEEEEEECCCCCEEECCCHHHHH
NIKSSPLTTQEDRDYLIDAINYMFPSVNVTDEDIESTWAGIRPLIYEEGKDPSEISRKDE
HCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCEECCCCCHHHHHHHHH
IWEGKSGLLTIAGGKLTGYRHMAQDIVDLVSKRLKKDYGLTFSPCNTKGLAISGGDVGGS
HCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEECCCCCCC
KNFDAFVEQKVDVAKGFGIDEDVARRLASKYGSNVDELFNIAQTSQYHDSKLPLEIYVEL
CCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCHHHHHHH
VYSIQQEMVYKPNDFLVRRSGKMYFNIKDVLDYKDAVIDIMADMLDYSPAQIEAYTEEVE
HHHHHHHHCCCCCCEEEEECCCEEEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
QAIKEAQHGNNQPAVKE
HHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA