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The map label for this gene is yitU [H]

Identifier: 57651663

GI number: 57651663

Start: 982437

End: 983261

Strand: Reverse

Name: yitU [H]

Synonym: SACOL0976

Alternate gene names: 57651663

Gene position: 983261-982437 (Counterclockwise)

Preceding gene: 57651667

Following gene: 57651662

Centisome position: 35.0

GC content: 31.52

Gene sequence:

>825_bases
ATGCAACCACATTTAATATGTCTAGACTTAGACGGAACATTATTAAACGATAACAAAGAAATTTCATCATATACTAAACA
AGTATTAAATGAATTACAACAACGTGGACACCAAATTATGATTGCGACTGGCAGACCTTATCGTGCAAGTCAAATGTATT
ATCATGAATTAAATTTAACGACACCAATTGTTAATTTTAATGGCGCTTACGTACATCACCCTAAAGATAAAAACTTCAAA
ACTTGCCATGAAATTTTAGATTTAGGCATCGCACAAAACATTATTCAAGGATTACAACAATATCAAGTATCGAATATTAT
AGCAGAAGTGAAAGATTATGTTTTCATTAACAATCATGATCCAAGATTATTTGAAGGTTTTTCAATGGGTAATCCAAGAA
TTCAAACTGGTAATTTACTTGTCCACTTGAAAGAATCCCCTACCTCAATTTTAATTGAAGCCGAAGAAAGTAAAATACCT
GAAATCAAAAATATGCTTACTCATTTTTATGCCGATCATATTGAGCATCGACGCTGGGGCGCACCATTCCCTGTCATTGA
AATTGTAAAACTTGGTATTAATAAAGCAAGAGGCATTGAGCAAGTTAGACAATTTTTAAATATTGACCGAAATAATATTA
TTGCATTCGGTGATGAAGATAATGATATTGAAATGATTGAGTACGCGCGTCACGGTGTTGCTATGGAAAATGGTTTGCAA
GAACTTAAAGATGTAGCGAACAATATTACATTCAACAATAATGAAGATGGCATTGGTCGATATTTGAATGATTTCTTTAA
TTTAAATATTAGATATTACTGTTAA

Upstream 100 bases:

>100_bases
TTAATGTCATATTATTCATAATATATCAAATATCCGACAAAACGCCAATAAAATGCTATGATGTATCTATATGAACTAAG
CAACTTATGAGGAGAGAGAT

Downstream 100 bases:

>100_bases
TTTATAACTAATCATTTTATAATATTTTAAAACAATAGGAGGTAAGTTACGATGCCCAAAATAGTCGTAGTCGGAGCAGT
CGCTGGCGGTGCAACATGTG

Product: HAD superfamily hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 274; Mature: 274

Protein sequence:

>274_residues
MQPHLICLDLDGTLLNDNKEISSYTKQVLNELQQRGHQIMIATGRPYRASQMYYHELNLTTPIVNFNGAYVHHPKDKNFK
TCHEILDLGIAQNIIQGLQQYQVSNIIAEVKDYVFINNHDPRLFEGFSMGNPRIQTGNLLVHLKESPTSILIEAEESKIP
EIKNMLTHFYADHIEHRRWGAPFPVIEIVKLGINKARGIEQVRQFLNIDRNNIIAFGDEDNDIEMIEYARHGVAMENGLQ
ELKDVANNITFNNNEDGIGRYLNDFFNLNIRYYC

Sequences:

>Translated_274_residues
MQPHLICLDLDGTLLNDNKEISSYTKQVLNELQQRGHQIMIATGRPYRASQMYYHELNLTTPIVNFNGAYVHHPKDKNFK
TCHEILDLGIAQNIIQGLQQYQVSNIIAEVKDYVFINNHDPRLFEGFSMGNPRIQTGNLLVHLKESPTSILIEAEESKIP
EIKNMLTHFYADHIEHRRWGAPFPVIEIVKLGINKARGIEQVRQFLNIDRNNIIAFGDEDNDIEMIEYARHGVAMENGLQ
ELKDVANNITFNNNEDGIGRYLNDFFNLNIRYYC
>Mature_274_residues
MQPHLICLDLDGTLLNDNKEISSYTKQVLNELQQRGHQIMIATGRPYRASQMYYHELNLTTPIVNFNGAYVHHPKDKNFK
TCHEILDLGIAQNIIQGLQQYQVSNIIAEVKDYVFINNHDPRLFEGFSMGNPRIQTGNLLVHLKESPTSILIEAEESKIP
EIKNMLTHFYADHIEHRRWGAPFPVIEIVKLGINKARGIEQVRQFLNIDRNNIIAFGDEDNDIEMIEYARHGVAMENGLQ
ELKDVANNITFNNNEDGIGRYLNDFFNLNIRYYC

Specific function: Unknown

COG id: COG0561

COG function: function code R; Predicted hydrolases of the HAD superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. Cof family [H]

Homologues:

Organism=Escherichia coli, GI2367265, Length=277, Percent_Identity=29.6028880866426, Blast_Score=100, Evalue=7e-23,
Organism=Escherichia coli, GI1786982, Length=280, Percent_Identity=27.1428571428571, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI48994981, Length=276, Percent_Identity=27.536231884058, Blast_Score=79, Evalue=5e-16,
Organism=Escherichia coli, GI1787043, Length=263, Percent_Identity=25.8555133079848, Blast_Score=76, Evalue=3e-15,
Organism=Escherichia coli, GI87081790, Length=263, Percent_Identity=23.9543726235741, Blast_Score=64, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023214
- InterPro:   IPR013200
- InterPro:   IPR006379
- InterPro:   IPR000150 [H]

Pfam domain/function: PF08282 Hydrolase_3 [H]

EC number: NA

Molecular weight: Translated: 31669; Mature: 31669

Theoretical pI: Translated: 5.91; Mature: 5.91

Prosite motif: PS01228 COF_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQPHLICLDLDGTLLNDNKEISSYTKQVLNELQQRGHQIMIATGRPYRASQMYYHELNLT
CCCCEEEEECCCEEECCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCEEEEEECCC
TPIVNFNGAYVHHPKDKNFKTCHEILDLGIAQNIIQGLQQYQVSNIIAEVKDYVFINNHD
CCEEECCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCC
PRLFEGFSMGNPRIQTGNLLVHLKESPTSILIEAEESKIPEIKNMLTHFYADHIEHRRWG
CCCEECCCCCCCEEEECCEEEEEECCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCC
APFPVIEIVKLGINKARGIEQVRQFLNIDRNNIIAFGDEDNDIEMIEYARHGVAMENGLQ
CCCHHHHHHHHCCCHHCCHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHCCHHHHHHH
ELKDVANNITFNNNEDGIGRYLNDFFNLNIRYYC
HHHHHHHCCCCCCCCCHHHHHHHHHHCCCEEEEC
>Mature Secondary Structure
MQPHLICLDLDGTLLNDNKEISSYTKQVLNELQQRGHQIMIATGRPYRASQMYYHELNLT
CCCCEEEEECCCEEECCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCEEEEEECCC
TPIVNFNGAYVHHPKDKNFKTCHEILDLGIAQNIIQGLQQYQVSNIIAEVKDYVFINNHD
CCEEECCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCC
PRLFEGFSMGNPRIQTGNLLVHLKESPTSILIEAEESKIPEIKNMLTHFYADHIEHRRWG
CCCEECCCCCCCEEEECCEEEEEECCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCC
APFPVIEIVKLGINKARGIEQVRQFLNIDRNNIIAFGDEDNDIEMIEYARHGVAMENGLQ
CCCHHHHHHHHCCCHHCCHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHCCHHHHHHH
ELKDVANNITFNNNEDGIGRYLNDFFNLNIRYYC
HHHHHHHCCCCCCCCCHHHHHHHHHHCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353931; 9025291; 9384377 [H]