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The map label for this gene is yclF [H]

Identifier: 57651564

GI number: 57651564

Start: 811341

End: 812846

Strand: Reverse

Name: yclF [H]

Synonym: SACOL0788

Alternate gene names: 57651564

Gene position: 812846-811341 (Counterclockwise)

Preceding gene: 57651565

Following gene: 57651563

Centisome position: 28.93

GC content: 34.26

Gene sequence:

>1506_bases
ATGACACAACAAAACTCCCATGGAAATCAAATTCAAGACATACCTCAAACAGGATTTTTCGGGCATCCTCGAGGACTAGG
CGTACTCTTCTTTGTAGAGTTCTGGGAAAGGTTTAGTTATTATGGCATGCGTGCCCTACTCATTTTCTACATGTACTTTG
CCGTAACAGATAATGGCCTTGGAATTGATAAAACAACAGCTATGTCAATTATGTCAGTTTATGGTTCATTAATCTATATG
ACATCAATACCAGGCGGATGGATTGCTGACAGAATTACAGGCACTAGAGGCGCTACTTTATTAGGTGCAGTCTTTATTAT
TATCGGACATATTTGTTTAAGCTTACCATTTGCATTAATCGGCTTATTCACATCAATGTTCTTCATCATTATTGGTTCAG
GTTTAATGAAGCCAAACATTTCAAATATCGTTGGCCGTTTATATCCTGAAAATGATAGACGTATGGATGCAGGTTTTGTT
ATTTTCTATATGTCAGTTAATATGGGTGCATTATTATCACCTATTATTTTGCAACACTTTGTTAATGTTAAAAACTTCCA
CGGCGGATTCTTGATTGCAGCAGTTGGTATGGCATTAGGTTTAGTATGGTATGTACTTTTCAACCGCAAAAACTTAGGTA
GCGTTGGTATGAAACCTACTAACCCATTGACACCAGCTGAAAAGAAAAAGTATGGTCTTATTATCGGAAGTGTTGTTTTA
GCAATTGTATTAATTATCGTTATTGGTGCATTAACTAACTCATTATCATTTAACTTAGTTAGTAATACTGTTTTAGTATT
AGGTATTGCATTACCAATCATTTACTTCACTTTAATTATTAGAAGTAAAGATGTCACTGATACTGAACGTTCTCGTGTTA
AAGCATTTATTCCATTATTTATTCTTGGAATGGTGTTCTGGGCTATTCAAGAACAAGGGTCTAATGTATTAAACATATAT
GGAATTGAACATTCAGATATGAAATTAAACTTATTTGGTTGGAAAACAAACTTTGGTGAAGCGATCTTCCAATCAATTAA
CCCATTATTTATTTTATTACTAGCTCCAATTATTTCACTTTTATGGCAAAAGCTTGGAACTAAACAACCTAGCCTGCCAG
TAAAATTTGCAATTGGTACGTTCTTAGCAGGTGCGTCATACATACTAATTGGTATTGTAGGTTATGCATCAGGTTCATCA
AACTTTTCAGTTAACTGGGTTATTTTATCGTACATTATTTGTGTTATCGGTGAGCTATGCTTATCACCAACGGGTAATAG
TGCTGCTGTTAAGTTAGCACCTAAAGCATTTAATGCCCAAATGATGAGTATTTGGTACTTAACTAACGCTTCTGCACAAG
CAATCAATGGTACTTTAGTTAAGTTAATAGAACCACTAGGTCAAACAAATTACTTTATTTTCCTAGGTGTTGTTGCAATT
ATTGTTACAACAATTGTATTAGCATTCTCACCTTTAATCATCAAAGCGATGAAAGGTATACGTTAA

Upstream 100 bases:

>100_bases
ATTTTTATTTTTTTGTGATTTGTTGGAATATTTAGTTGATAAGGCACAATCAAATTTACTTAAACTATTGTATTAGGGGA
AGAAAGGATGGGATGTATAC

Downstream 100 bases:

>100_bases
TATTGTTGGCCTAATTCAAAAAACAGTAAGTCATTTAAATGGCTTACTATTTTTTTATAGGTTTCTATTAATTAAATTCA
AGATATCAGTATAAATAAAA

Product: proton-dependent oligopeptide transporter family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 501; Mature: 500

Protein sequence:

>501_residues
MTQQNSHGNQIQDIPQTGFFGHPRGLGVLFFVEFWERFSYYGMRALLIFYMYFAVTDNGLGIDKTTAMSIMSVYGSLIYM
TSIPGGWIADRITGTRGATLLGAVFIIIGHICLSLPFALIGLFTSMFFIIIGSGLMKPNISNIVGRLYPENDRRMDAGFV
IFYMSVNMGALLSPIILQHFVNVKNFHGGFLIAAVGMALGLVWYVLFNRKNLGSVGMKPTNPLTPAEKKKYGLIIGSVVL
AIVLIIVIGALTNSLSFNLVSNTVLVLGIALPIIYFTLIIRSKDVTDTERSRVKAFIPLFILGMVFWAIQEQGSNVLNIY
GIEHSDMKLNLFGWKTNFGEAIFQSINPLFILLLAPIISLLWQKLGTKQPSLPVKFAIGTFLAGASYILIGIVGYASGSS
NFSVNWVILSYIICVIGELCLSPTGNSAAVKLAPKAFNAQMMSIWYLTNASAQAINGTLVKLIEPLGQTNYFIFLGVVAI
IVTTIVLAFSPLIIKAMKGIR

Sequences:

>Translated_501_residues
MTQQNSHGNQIQDIPQTGFFGHPRGLGVLFFVEFWERFSYYGMRALLIFYMYFAVTDNGLGIDKTTAMSIMSVYGSLIYM
TSIPGGWIADRITGTRGATLLGAVFIIIGHICLSLPFALIGLFTSMFFIIIGSGLMKPNISNIVGRLYPENDRRMDAGFV
IFYMSVNMGALLSPIILQHFVNVKNFHGGFLIAAVGMALGLVWYVLFNRKNLGSVGMKPTNPLTPAEKKKYGLIIGSVVL
AIVLIIVIGALTNSLSFNLVSNTVLVLGIALPIIYFTLIIRSKDVTDTERSRVKAFIPLFILGMVFWAIQEQGSNVLNIY
GIEHSDMKLNLFGWKTNFGEAIFQSINPLFILLLAPIISLLWQKLGTKQPSLPVKFAIGTFLAGASYILIGIVGYASGSS
NFSVNWVILSYIICVIGELCLSPTGNSAAVKLAPKAFNAQMMSIWYLTNASAQAINGTLVKLIEPLGQTNYFIFLGVVAI
IVTTIVLAFSPLIIKAMKGIR
>Mature_500_residues
TQQNSHGNQIQDIPQTGFFGHPRGLGVLFFVEFWERFSYYGMRALLIFYMYFAVTDNGLGIDKTTAMSIMSVYGSLIYMT
SIPGGWIADRITGTRGATLLGAVFIIIGHICLSLPFALIGLFTSMFFIIIGSGLMKPNISNIVGRLYPENDRRMDAGFVI
FYMSVNMGALLSPIILQHFVNVKNFHGGFLIAAVGMALGLVWYVLFNRKNLGSVGMKPTNPLTPAEKKKYGLIIGSVVLA
IVLIIVIGALTNSLSFNLVSNTVLVLGIALPIIYFTLIIRSKDVTDTERSRVKAFIPLFILGMVFWAIQEQGSNVLNIYG
IEHSDMKLNLFGWKTNFGEAIFQSINPLFILLLAPIISLLWQKLGTKQPSLPVKFAIGTFLAGASYILIGIVGYASGSSN
FSVNWVILSYIICVIGELCLSPTGNSAAVKLAPKAFNAQMMSIWYLTNASAQAINGTLVKLIEPLGQTNYFIFLGVVAII
VTTIVLAFSPLIIKAMKGIR

Specific function: Unknown

COG id: COG3104

COG function: function code E; Dipeptide/tripeptide permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PTR2/POT transporter (TC 2.A.17) family [H]

Homologues:

Organism=Homo sapiens, GI4827008, Length=409, Percent_Identity=27.3838630806846, Blast_Score=77, Evalue=5e-14,
Organism=Homo sapiens, GI226371746, Length=171, Percent_Identity=32.1637426900585, Blast_Score=73, Evalue=8e-13,
Organism=Escherichia coli, GI1787922, Length=491, Percent_Identity=25.8655804480652, Blast_Score=169, Evalue=4e-43,
Organism=Escherichia coli, GI1789911, Length=496, Percent_Identity=27.4193548387097, Blast_Score=162, Evalue=3e-41,
Organism=Escherichia coli, GI1790572, Length=418, Percent_Identity=28.9473684210526, Blast_Score=161, Evalue=7e-41,
Organism=Escherichia coli, GI1786927, Length=420, Percent_Identity=29.5238095238095, Blast_Score=155, Evalue=6e-39,
Organism=Caenorhabditis elegans, GI71987453, Length=179, Percent_Identity=29.0502793296089, Blast_Score=70, Evalue=4e-12,
Organism=Drosophila melanogaster, GI28571098, Length=421, Percent_Identity=25.8907363420428, Blast_Score=78, Evalue=1e-14,
Organism=Drosophila melanogaster, GI28571102, Length=421, Percent_Identity=25.8907363420428, Blast_Score=78, Evalue=2e-14,
Organism=Drosophila melanogaster, GI28571100, Length=421, Percent_Identity=25.8907363420428, Blast_Score=78, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24639585, Length=371, Percent_Identity=24.7978436657682, Blast_Score=68, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24639583, Length=371, Percent_Identity=24.7978436657682, Blast_Score=68, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24639581, Length=371, Percent_Identity=24.7978436657682, Blast_Score=67, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR016196
- InterPro:   IPR000109
- InterPro:   IPR005279
- InterPro:   IPR018456 [H]

Pfam domain/function: PF00854 PTR2 [H]

EC number: NA

Molecular weight: Translated: 54829; Mature: 54698

Theoretical pI: Translated: 9.99; Mature: 9.99

Prosite motif: PS50850 MFS ; PS01023 PTR2_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQQNSHGNQIQDIPQTGFFGHPRGLGVLFFVEFWERFSYYGMRALLIFYMYFAVTDNGL
CCCCCCCCCCHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
GIDKTTAMSIMSVYGSLIYMTSIPGGWIADRITGTRGATLLGAVFIIIGHICLSLPFALI
CCCHHHHHHHHHHHHHHEEEECCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
GLFTSMFFIIIGSGLMKPNISNIVGRLYPENDRRMDAGFVIFYMSVNMGALLSPIILQHF
HHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHH
VNVKNFHGGFLIAAVGMALGLVWYVLFNRKNLGSVGMKPTNPLTPAEKKKYGLIIGSVVL
HCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
AIVLIIVIGALTNSLSFNLVSNTVLVLGIALPIIYFTLIIRSKDVTDTERSRVKAFIPLF
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
ILGMVFWAIQEQGSNVLNIYGIEHSDMKLNLFGWKTNFGEAIFQSINPLFILLLAPIISL
HHHHHHHHHHHCCCCEEEEEECCCCCEEEEEEECCCCHHHHHHHHCCHHHHHHHHHHHHH
LWQKLGTKQPSLPVKFAIGTFLAGASYILIGIVGYASGSSNFSVNWVILSYIICVIGELC
HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHH
LSPTGNSAAVKLAPKAFNAQMMSIWYLTNASAQAINGTLVKLIEPLGQTNYFIFLGVVAI
CCCCCCCCEEEECCHHHCCEEEEEEEEECCCHHHHCHHHHHHHHHCCCCCHHHHHHHHHH
IVTTIVLAFSPLIIKAMKGIR
HHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TQQNSHGNQIQDIPQTGFFGHPRGLGVLFFVEFWERFSYYGMRALLIFYMYFAVTDNGL
CCCCCCCCCHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC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HHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]