Click here to switch to the map view.

The map label for this gene is ydfU [C]

Identifier: 57651267

GI number: 57651267

Start: 364084

End: 364779

Strand: Direct

Name: ydfU [C]

Synonym: SACOL0340

Alternate gene names: 57651267

Gene position: 364084-364779 (Clockwise)

Preceding gene: 57651266

Following gene: 57651268

Centisome position: 12.96

GC content: 39.08

Gene sequence:

>696_bases
ATGCCAAAAATTACTAGTTATATCACTCAAGACGACGGCACAACAACAGTTGTCATCTCGGGTGTCGAATTAGGCAATAA
AGAAACATTACTACTTGATAACGGGTTTGATGTAGAAGTAGATGTAAACGTTATAGATCCGTTTCAAATTACCGGCAAGC
AACGTCGAAAAATATTCGCGCTTGTCAAAGACATAGAAGAACATACAGGTCAACCAATGGACTATATGAGACATATGTTC
ATCGAGTTTGTAAGAACGTACTACGGCTATGATGAACGTATTTCGCTAAGTAATTGTACGAGAACACAAGCAAGTCAAAT
CATTGAAGCAACGCTTGACTGGACGTTCTACAATGACATACCACTTAGCTACAAAACGAGTAATCTACTGAAACAAGATA
AATCGTTCTTATACTGGTCAACTGTTAACCGCAACTGTGTAATATGCGGAAAGCCTCACGCTGACCTAGCACATTATGAA
GCGGTTGGCAGAGGCATGAACAGAAATAAGATGAATCACTATGACAAACATGTATTAGCGTTATGTCGCGAACATCACAA
TGAGCAACATGCGATTGGCGTTAAGTCGTTTGATGATAAATATCACTTGCATGACTCGTGGATAAAAGTTGATGAGAGGC
TCAACAAAATGCTGAAAGGAGAAGACAATGGGAGAAGTATCGTGGATAAAACTTAA

Upstream 100 bases:

>100_bases
AATAACCAACAACACAACGGACAAACTCAAACTGGTAATAATCCGTTCGACAATACCGAAGAAGACTTTTCTGACTTACC
GTTCTGATTGGAATGATTAA

Downstream 100 bases:

>100_bases
AGTTGGCATGTTTGATGACAGCAAAATCAAATATATCGAAGCTTTACCCGAAAGAGATACGATCATAACTATTTGGGTTA
AGTTGCTAACTTTATCAGGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 231; Mature: 230

Protein sequence:

>231_residues
MPKITSYITQDDGTTTVVISGVELGNKETLLLDNGFDVEVDVNVIDPFQITGKQRRKIFALVKDIEEHTGQPMDYMRHMF
IEFVRTYYGYDERISLSNCTRTQASQIIEATLDWTFYNDIPLSYKTSNLLKQDKSFLYWSTVNRNCVICGKPHADLAHYE
AVGRGMNRNKMNHYDKHVLALCREHHNEQHAIGVKSFDDKYHLHDSWIKVDERLNKMLKGEDNGRSIVDKT

Sequences:

>Translated_231_residues
MPKITSYITQDDGTTTVVISGVELGNKETLLLDNGFDVEVDVNVIDPFQITGKQRRKIFALVKDIEEHTGQPMDYMRHMF
IEFVRTYYGYDERISLSNCTRTQASQIIEATLDWTFYNDIPLSYKTSNLLKQDKSFLYWSTVNRNCVICGKPHADLAHYE
AVGRGMNRNKMNHYDKHVLALCREHHNEQHAIGVKSFDDKYHLHDSWIKVDERLNKMLKGEDNGRSIVDKT
>Mature_230_residues
PKITSYITQDDGTTTVVISGVELGNKETLLLDNGFDVEVDVNVIDPFQITGKQRRKIFALVKDIEEHTGQPMDYMRHMFI
EFVRTYYGYDERISLSNCTRTQASQIIEATLDWTFYNDIPLSYKTSNLLKQDKSFLYWSTVNRNCVICGKPHADLAHYEA
VGRGMNRNKMNHYDKHVLALCREHHNEQHAIGVKSFDDKYHLHDSWIKVDERLNKMLKGEDNGRSIVDKT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26824; Mature: 26692

Theoretical pI: Translated: 6.74; Mature: 6.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKITSYITQDDGTTTVVISGVELGNKETLLLDNGFDVEVDVNVIDPFQITGKQRRKIFA
CCCCCCEEECCCCCEEEEEEEEEECCCCEEEEECCCEEEEEEEEECCCEECCHHHHHHHH
LVKDIEEHTGQPMDYMRHMFIEFVRTYYGYDERISLSNCTRTQASQIIEATLDWTFYNDI
HHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHCEEEECCC
PLSYKTSNLLKQDKSFLYWSTVNRNCVICGKPHADLAHYEAVGRGMNRNKMNHYDKHVLA
CCCCCHHHHHHHCCCEEEEEECCCCEEEECCCCCCHHHHHHHHCCCCCCCCHHHHHHHHH
LCREHHNEQHAIGVKSFDDKYHLHDSWIKVDERLNKMLKGEDNGRSIVDKT
HHHHHCCCCCEECCCCCCCCEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
PKITSYITQDDGTTTVVISGVELGNKETLLLDNGFDVEVDVNVIDPFQITGKQRRKIFA
CCCCCEEECCCCCEEEEEEEEEECCCCEEEEECCCEEEEEEEEECCCEECCHHHHHHHH
LVKDIEEHTGQPMDYMRHMFIEFVRTYYGYDERISLSNCTRTQASQIIEATLDWTFYNDI
HHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHCEEEECCC
PLSYKTSNLLKQDKSFLYWSTVNRNCVICGKPHADLAHYEAVGRGMNRNKMNHYDKHVLA
CCCCCHHHHHHHCCCEEEEEECCCCEEEECCCCCCHHHHHHHHCCCCCCCCHHHHHHHHH
LCREHHNEQHAIGVKSFDDKYHLHDSWIKVDERLNKMLKGEDNGRSIVDKT
HHHHHCCCCCEECCCCCCCCEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA