Definition | Staphylococcus aureus subsp. aureus COL chromosome, complete genome. |
---|---|
Accession | NC_002951 |
Length | 2,809,422 |
Click here to switch to the map view.
The map label for this gene is gpmA
Identifier: 57650960
GI number: 57650960
Start: 2474088
End: 2474774
Strand: Reverse
Name: gpmA
Synonym: SACOL2415
Alternate gene names: 57650960
Gene position: 2474774-2474088 (Counterclockwise)
Preceding gene: 57650961
Following gene: 57650958
Centisome position: 88.09
GC content: 33.62
Gene sequence:
>687_bases ATGCCAAAATTAATTTTATGTCGTCATGGACAAAGCGAGTGGAATGCTAAAAACTTATTTACTGGATGGGAAGATGTTAA TTTATCTGAACAAGGTATTAATGAAGCGACTAGAGCAGGTGAAAAAGTAAGAGAAAATAACATTGCCATCGATGTAGCTT TTACATCGTTATTAACACGTGCTTTAGATACAACGCATTATATTTTAACTGAATCTAAACAACAATGGATTCCTGTATAT AAAAGCTGGCGTTTAAATGAACGCCACTATGGTGGATTGCAAGGCTTAAATAAAGATGATGCTAGAAAAGAATTTGGAGA AGAACAAGTACATATTTGGCGTCGTTCTTATGATGTGAAACCACCTGCTGAAACCGAAGAACAACGTGAAGCTTACTTAG CTGATCGTCGATATAATCATTTAGATAAACGTATGATGCCTTATTCTGAAAGTCTGAAAGATACTTTAGTTCGAGTGATA CCATTTTGGACAGATCATATTTCACAATATTTGCTAGATGGTCAAACGGTATTAGTTTCTGCACACGGAAATTCAATTCG CGCATTGATTAAATATCTTGAAGATGTGTCAGATGAAGATATCATTAATTATGAAATTAAAACAGGTGCACCGCTTGTTT ATGAATTAACGGATGATTTAGAAGTTATAGATAAATACTACTTATAA
Upstream 100 bases:
>100_bases GAATTTTAAAATATATTGAAAAGAAAATTACTAAGATTAAATCATCTTAAAATATCCCTGAAATAACGTCCTAAAGATTA AAGGAAAGAGGTTATAAGTT
Downstream 100 bases:
>100_bases AAAAAGAGCTGCATGTACACAAGGAGTGAGTGTATATGCAGCTCTTAAATATGTGAAGTAATGTAAGGAAATAGTTAAGT ATAGAGTTTATATTAACGAG
Product: phosphoglyceromutase
Products: NA
Alternate protein names: BPG-dependent PGAM; PGAM; Phosphoglyceromutase; dPGM
Number of amino acids: Translated: 228; Mature: 227
Protein sequence:
>228_residues MPKLILCRHGQSEWNAKNLFTGWEDVNLSEQGINEATRAGEKVRENNIAIDVAFTSLLTRALDTTHYILTESKQQWIPVY KSWRLNERHYGGLQGLNKDDARKEFGEEQVHIWRRSYDVKPPAETEEQREAYLADRRYNHLDKRMMPYSESLKDTLVRVI PFWTDHISQYLLDGQTVLVSAHGNSIRALIKYLEDVSDEDIINYEIKTGAPLVYELTDDLEVIDKYYL
Sequences:
>Translated_228_residues MPKLILCRHGQSEWNAKNLFTGWEDVNLSEQGINEATRAGEKVRENNIAIDVAFTSLLTRALDTTHYILTESKQQWIPVY KSWRLNERHYGGLQGLNKDDARKEFGEEQVHIWRRSYDVKPPAETEEQREAYLADRRYNHLDKRMMPYSESLKDTLVRVI PFWTDHISQYLLDGQTVLVSAHGNSIRALIKYLEDVSDEDIINYEIKTGAPLVYELTDDLEVIDKYYL >Mature_227_residues PKLILCRHGQSEWNAKNLFTGWEDVNLSEQGINEATRAGEKVRENNIAIDVAFTSLLTRALDTTHYILTESKQQWIPVYK SWRLNERHYGGLQGLNKDDARKEFGEEQVHIWRRSYDVKPPAETEEQREAYLADRRYNHLDKRMMPYSESLKDTLVRVIP FWTDHISQYLLDGQTVLVSAHGNSIRALIKYLEDVSDEDIINYEIKTGAPLVYELTDDLEVIDKYYL
Specific function: Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
COG id: COG0588
COG function: function code G; Phosphoglycerate mutase 1
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily
Homologues:
Organism=Homo sapiens, GI50593010, Length=221, Percent_Identity=45.2488687782805, Blast_Score=221, Evalue=5e-58, Organism=Homo sapiens, GI4502445, Length=228, Percent_Identity=46.4912280701754, Blast_Score=218, Evalue=2e-57, Organism=Homo sapiens, GI40353764, Length=228, Percent_Identity=46.4912280701754, Blast_Score=218, Evalue=2e-57, Organism=Homo sapiens, GI4505753, Length=223, Percent_Identity=46.6367713004484, Blast_Score=211, Evalue=6e-55, Organism=Homo sapiens, GI71274132, Length=223, Percent_Identity=43.9461883408072, Blast_Score=195, Evalue=3e-50, Organism=Homo sapiens, GI310129614, Length=161, Percent_Identity=47.8260869565217, Blast_Score=151, Evalue=6e-37, Organism=Escherichia coli, GI1786970, Length=226, Percent_Identity=47.787610619469, Blast_Score=233, Evalue=1e-62, Organism=Saccharomyces cerevisiae, GI6322697, Length=229, Percent_Identity=50.2183406113537, Blast_Score=240, Evalue=1e-64, Organism=Saccharomyces cerevisiae, GI6324516, Length=275, Percent_Identity=32.3636363636364, Blast_Score=140, Evalue=1e-34, Organism=Saccharomyces cerevisiae, GI6320183, Length=281, Percent_Identity=32.0284697508897, Blast_Score=133, Evalue=2e-32, Organism=Saccharomyces cerevisiae, GI6324857, Length=101, Percent_Identity=33.6633663366337, Blast_Score=67, Evalue=3e-12, Organism=Drosophila melanogaster, GI24646216, Length=225, Percent_Identity=48.8888888888889, Blast_Score=224, Evalue=4e-59, Organism=Drosophila melanogaster, GI85725270, Length=224, Percent_Identity=45.5357142857143, Blast_Score=201, Evalue=3e-52, Organism=Drosophila melanogaster, GI85725272, Length=224, Percent_Identity=45.5357142857143, Blast_Score=201, Evalue=3e-52, Organism=Drosophila melanogaster, GI24650981, Length=224, Percent_Identity=45.5357142857143, Blast_Score=201, Evalue=3e-52, Organism=Drosophila melanogaster, GI28571815, Length=217, Percent_Identity=36.405529953917, Blast_Score=153, Evalue=9e-38, Organism=Drosophila melanogaster, GI28571817, Length=217, Percent_Identity=36.405529953917, Blast_Score=153, Evalue=9e-38, Organism=Drosophila melanogaster, GI24648979, Length=217, Percent_Identity=36.405529953917, Blast_Score=153, Evalue=1e-37,
Paralogues:
None
Copy number: 960 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): GPMA_STAA1 (A7X656)
Other databases:
- EMBL: AP009324 - RefSeq: YP_001442990.1 - ProteinModelPortal: A7X656 - SMR: A7X656 - STRING: A7X656 - EnsemblBacteria: EBSTAT00000003591 - GeneID: 5559468 - GenomeReviews: AP009324_GR - KEGG: saw:SAHV_2400 - eggNOG: COG0588 - GeneTree: EBGT00050000023828 - HOGENOM: HBG658938 - OMA: TGWKDPD - ProtClustDB: PRK14119 - BioCyc: SAUR418127:SAHV_2400-MONOMER - GO: GO:0006096 - HAMAP: MF_01039 - InterPro: IPR013078 - InterPro: IPR001345 - InterPro: IPR005952 - PANTHER: PTHR11931 - SMART: SM00855 - TIGRFAMs: TIGR01258
Pfam domain/function: PF00300 PGAM
EC number: =5.4.2.1
Molecular weight: Translated: 26680; Mature: 26549
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: PS00175 PG_MUTASE
Important sites: ACT_SITE 9-9 ACT_SITE 182-182
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKLILCRHGQSEWNAKNLFTGWEDVNLSEQGINEATRAGEKVRENNIAIDVAFTSLLTR CCCEEEEECCCCCCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHCCEEEEHHHHHHHHH ALDTTHYILTESKQQWIPVYKSWRLNERHYGGLQGLNKDDARKEFGEEQVHIWRRSYDVK HHHHHHEEEECCCCHHCCHHHCCCCCCCCCCCCCCCCCHHHHHHHCHHHHHHHHHHCCCC PPAETEEQREAYLADRRYNHLDKRMMPYSESLKDTLVRVIPFWTDHISQYLLDGQTVLVS CCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE AHGNSIRALIKYLEDVSDEDIINYEIKTGAPLVYELTDDLEVIDKYYL ECCCHHHHHHHHHHCCCCCCEEEEEECCCCCEEEEECHHHHHHHHHCC >Mature Secondary Structure PKLILCRHGQSEWNAKNLFTGWEDVNLSEQGINEATRAGEKVRENNIAIDVAFTSLLTR CCEEEEECCCCCCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHCCEEEEHHHHHHHHH ALDTTHYILTESKQQWIPVYKSWRLNERHYGGLQGLNKDDARKEFGEEQVHIWRRSYDVK HHHHHHEEEECCCCHHCCHHHCCCCCCCCCCCCCCCCCHHHHHHHCHHHHHHHHHHCCCC PPAETEEQREAYLADRRYNHLDKRMMPYSESLKDTLVRVIPFWTDHISQYLLDGQTVLVS CCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE AHGNSIRALIKYLEDVSDEDIINYEIKTGAPLVYELTDDLEVIDKYYL ECCCHHHHHHHHHHCCCCCCEEEEEECCCCCEEEEECHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA