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The map label for this gene is 57650887

Identifier: 57650887

GI number: 57650887

Start: 2398834

End: 2399442

Strand: Direct

Name: 57650887

Synonym: SACOL2339

Alternate gene names: NA

Gene position: 2398834-2399442 (Clockwise)

Preceding gene: 57650879

Following gene: 57650888

Centisome position: 85.39

GC content: 38.1

Gene sequence:

>609_bases
ATGGATTTCGTTAATAATGATACAAGACAAATTGCTAAAAACTTATTAGGTGTCAAAGTGATTTATCAGGATACCACTCA
AACGTATACAGGCTACATCGTGGAAACGGAAGCTTACTTAGGTTTGAATGATCGTGCGGCTCATGGCTATGGCGGTAAAA
TAACACCTAAAGTCACGTCATTATATAAACGTGGTGGTACAATTTATGCACATGTCATGCATACGCATTTACTCATTAAT
TTTGTAACAAAATCTGAAGGTATACCTGAAGGCGTACTTATCCGCGCAATTGAACCAGAAGAAGGTTTATCCGCTATGTT
CCGTAACAGAGGTAAGAAAGGCTACGAGGTAACGAATGGCCCAGGAAAATGGACTAAGGCATTTAACATTCCACGGGCTA
TCGATGGCGCTACGTTAAATGACTGTAGATTGTCTATTGATACTAAGAATCGTAAATATCCTAAAGATATTATTGCTAGT
CCACGAATCGGTATTCCAAATAAAGGTGATTGGACACATAAATCTTTACGTTACACAGTGAAAGGTAATCCATTTGTGTC
TCGCATGCGTAAATCAGATTGTATGTTTCCCGAAGATACTTGGAAATAA

Upstream 100 bases:

>100_bases
TTATAATTCTTAACAATACTATTTTATCAAACATTTACCACAATAAAAATATCTTTTTCATTTTTATTTAAATTAATCAT
ATAATTGCGAGGAGAATATT

Downstream 100 bases:

>100_bases
ATGCCATCTTTCATTGATTACTATCATGAAAATGAAATCTATCTCCTTATAAGTCAATCAATCGTGCCGTCAACATGCGG
ATGGGTTGATTGTTTTTCTT

Product: DNA-3-methyladenine glycosylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 202; Mature: 202

Protein sequence:

>202_residues
MDFVNNDTRQIAKNLLGVKVIYQDTTQTYTGYIVETEAYLGLNDRAAHGYGGKITPKVTSLYKRGGTIYAHVMHTHLLIN
FVTKSEGIPEGVLIRAIEPEEGLSAMFRNRGKKGYEVTNGPGKWTKAFNIPRAIDGATLNDCRLSIDTKNRKYPKDIIAS
PRIGIPNKGDWTHKSLRYTVKGNPFVSRMRKSDCMFPEDTWK

Sequences:

>Translated_202_residues
MDFVNNDTRQIAKNLLGVKVIYQDTTQTYTGYIVETEAYLGLNDRAAHGYGGKITPKVTSLYKRGGTIYAHVMHTHLLIN
FVTKSEGIPEGVLIRAIEPEEGLSAMFRNRGKKGYEVTNGPGKWTKAFNIPRAIDGATLNDCRLSIDTKNRKYPKDIIAS
PRIGIPNKGDWTHKSLRYTVKGNPFVSRMRKSDCMFPEDTWK
>Mature_202_residues
MDFVNNDTRQIAKNLLGVKVIYQDTTQTYTGYIVETEAYLGLNDRAAHGYGGKITPKVTSLYKRGGTIYAHVMHTHLLIN
FVTKSEGIPEGVLIRAIEPEEGLSAMFRNRGKKGYEVTNGPGKWTKAFNIPRAIDGATLNDCRLSIDTKNRKYPKDIIAS
PRIGIPNKGDWTHKSLRYTVKGNPFVSRMRKSDCMFPEDTWK

Specific function: Unknown

COG id: COG2094

COG function: function code L; 3-methyladenine DNA glycosylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DNA glycosylase MPG family

Homologues:

Organism=Homo sapiens, GI62632769, Length=201, Percent_Identity=31.3432835820896, Blast_Score=89, Evalue=2e-18,
Organism=Homo sapiens, GI62632765, Length=201, Percent_Identity=31.3432835820896, Blast_Score=89, Evalue=2e-18,
Organism=Homo sapiens, GI62632771, Length=201, Percent_Identity=31.3432835820896, Blast_Score=89, Evalue=3e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): 3MGH_STAA1 (A7X5V7)

Other databases:

- EMBL:   AP009324
- RefSeq:   YP_001442918.1
- ProteinModelPortal:   A7X5V7
- SMR:   A7X5V7
- STRING:   A7X5V7
- EnsemblBacteria:   EBSTAT00000004950
- GeneID:   5559212
- GenomeReviews:   AP009324_GR
- KEGG:   saw:SAHV_2328
- eggNOG:   COG2094
- GeneTree:   EBGT00050000025411
- HOGENOM:   HBG664239
- OMA:   EHISSQY
- ProtClustDB:   CLSK885910
- BioCyc:   SAUR418127:SAHV_2328-MONOMER
- HAMAP:   MF_00527
- InterPro:   IPR011034
- InterPro:   IPR003180
- Gene3D:   G3DSA:3.10.300.10
- PANTHER:   PTHR10429
- TIGRFAMs:   TIGR00567

Pfam domain/function: PF02245 Pur_DNA_glyco; SSF50486 FMT_C_like

EC number: 3.2.2.-

Molecular weight: Translated: 22771; Mature: 22771

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFVNNDTRQIAKNLLGVKVIYQDTTQTYTGYIVETEAYLGLNDRAAHGYGGKITPKVTS
CCCCCCHHHHHHHHHHCEEEEEECCCCCEEEEEEEEEEEECCCCCCCCCCCCEECHHHHH
LYKRGGTIYAHVMHTHLLINFVTKSEGIPEGVLIRAIEPEEGLSAMFRNRGKKGYEVTNG
HHHCCCEEEEHHHHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHCCCCCCEEECC
PGKWTKAFNIPRAIDGATLNDCRLSIDTKNRKYPKDIIASPRIGIPNKGDWTHKSLRYTV
CCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHCCCCCCCCCCCCCCCCEEEEEE
KGNPFVSRMRKSDCMFPEDTWK
CCCHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MDFVNNDTRQIAKNLLGVKVIYQDTTQTYTGYIVETEAYLGLNDRAAHGYGGKITPKVTS
CCCCCCHHHHHHHHHHCEEEEEECCCCCEEEEEEEEEEEECCCCCCCCCCCCEECHHHHH
LYKRGGTIYAHVMHTHLLINFVTKSEGIPEGVLIRAIEPEEGLSAMFRNRGKKGYEVTNG
HHHCCCEEEEHHHHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHCCCCCCEEECC
PGKWTKAFNIPRAIDGATLNDCRLSIDTKNRKYPKDIIASPRIGIPNKGDWTHKSLRYTV
CCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHCCCCCCCCCCCCCCCCEEEEEE
KGNPFVSRMRKSDCMFPEDTWK
CCCHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA